Wall clock time and date at job start Mon Mar 8 2021 07:58:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53003 * 109.47167 * 2 1 4 4 C 1.52997 * 109.47202 * 239.99470 * 2 1 3 5 5 O 1.42904 * 109.46790 * 119.99667 * 2 1 3 6 6 C 1.42895 * 113.99895 * 60.00170 * 5 2 1 7 7 H 1.08994 * 112.91148 * 18.74861 * 6 5 2 8 8 C 1.53787 * 113.61204 * 150.00156 * 6 5 2 9 9 C 1.53779 * 87.07963 * 139.97889 * 8 6 5 10 10 H 1.09001 * 113.61377 * 89.20020 * 9 8 6 11 11 C 1.52998 * 113.61250 * 220.01477 * 9 8 6 12 12 O 1.42900 * 109.47401 * 185.00015 * 11 9 8 13 13 C 1.36013 * 117.00377 * 180.02562 * 12 11 9 14 14 C 1.38831 * 120.06618 * 269.72596 * 13 12 11 15 15 F 1.35094 * 120.03782 * 0.02562 * 14 13 12 16 16 C 1.38382 * 119.92648 * 179.76709 * 14 13 12 17 17 C 1.38257 * 120.06609 * 0.48743 * 16 14 13 18 18 C 1.50700 * 119.92801 * 179.76568 * 17 16 14 19 19 O 1.42898 * 109.47162 * 120.01910 * 18 17 16 20 20 Si 1.86303 * 109.46960 * 0.02562 * 18 17 16 21 21 C 1.38246 * 120.14103 * 359.78553 * 17 16 14 22 22 C 1.38382 * 120.06919 * 359.96173 * 21 17 16 23 23 F 1.35095 * 120.02907 * 180.02562 * 22 21 17 24 24 C 1.53779 * 87.08402 * 334.56577 * 9 8 6 25 25 H 1.08998 * 109.47657 * 300.00681 * 1 2 3 26 26 H 1.09010 * 109.46818 * 60.00243 * 1 2 3 27 27 H 1.08997 * 109.47442 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47375 * 180.02562 * 3 2 1 29 29 H 1.09006 * 109.46932 * 300.00094 * 3 2 1 30 30 H 1.08998 * 109.47388 * 59.99154 * 3 2 1 31 31 H 1.08997 * 109.47278 * 300.00536 * 4 2 1 32 32 H 1.09001 * 109.47226 * 60.00508 * 4 2 1 33 33 H 1.08998 * 109.47119 * 179.97438 * 4 2 1 34 34 H 1.08997 * 113.61028 * 254.52849 * 8 6 5 35 35 H 1.09000 * 113.61529 * 25.42988 * 8 6 5 36 36 H 1.09007 * 109.47269 * 305.00322 * 11 9 8 37 37 H 1.08998 * 109.47235 * 64.99931 * 11 9 8 38 38 H 1.07997 * 119.96225 * 180.24981 * 16 14 13 39 39 H 1.08998 * 109.47093 * 240.02086 * 18 17 16 40 40 H 0.96701 * 113.99916 * 300.00158 * 19 18 17 41 41 H 1.48501 * 110.00035 * 58.68228 * 20 18 17 42 42 H 1.48500 * 110.00102 * 179.97438 * 20 18 17 43 43 H 1.07995 * 119.96448 * 179.97438 * 21 17 16 44 44 H 1.09002 * 113.61557 * 270.88569 * 24 9 8 45 45 H 1.09004 * 113.61501 * 139.97990 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0063 -0.6736 1.1669 6 6 1.5846 -2.0354 1.2646 7 1 1.2512 -2.4458 0.3115 8 6 2.5836 -2.9377 2.0081 9 6 1.3666 -3.6117 2.6634 10 1 0.9744 -4.4540 2.0933 11 6 1.5710 -3.9399 4.1437 12 8 0.4397 -4.6637 4.6318 13 6 0.4615 -5.0347 5.9402 14 6 0.9989 -6.2613 6.3065 15 9 1.5014 -7.0881 5.3637 16 6 1.0240 -6.6338 7.6390 17 6 0.5056 -5.7902 8.6039 18 6 0.5297 -6.2013 10.0536 19 8 1.2858 -5.2502 10.8058 20 14 1.3166 -7.8828 10.2091 21 6 -0.0353 -4.5706 8.2417 22 6 -0.0587 -4.1901 6.9114 23 9 -0.5869 -2.9979 6.5584 24 6 0.6075 -2.2961 2.4232 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5139 -0.8901 27 1 -0.3634 -1.0276 0.0005 28 1 3.1300 1.4426 -0.0005 29 1 1.6766 1.9564 -0.8900 30 1 1.6766 1.9564 0.8899 31 1 1.6766 -1.7490 -1.2491 32 1 1.6768 -0.2076 -2.1392 33 1 3.1300 -0.7209 -1.2494 34 1 3.1476 -3.5992 1.3505 35 1 3.2170 -2.3996 2.7133 36 1 2.4688 -4.5470 4.2607 37 1 1.6819 -3.0147 4.7090 38 1 1.4455 -7.5861 7.9250 39 1 -0.4897 -6.2402 10.4372 40 1 2.2050 -5.1629 10.5186 41 1 2.6961 -7.8508 9.6603 42 1 1.3471 -8.2994 11.6342 43 1 -0.4399 -3.9140 8.9977 44 1 0.7007 -1.5825 3.2419 45 1 -0.4238 -2.4396 2.1007 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_6672274_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:58:40 Heat of formation + Delta-G solvation = -153.863031 kcal Electronic energy + Delta-G solvation = -28491.581739 eV Core-core repulsion = 24113.241595 eV Total energy + Delta-G solvation = -4378.340143 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.152 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -50.09784 -50.05167 -41.18553 -40.72765 -39.43022 -38.20340 -37.33252 -33.90682 -32.18757 -31.65126 -29.47810 -28.39959 -28.30782 -26.75553 -26.56399 -24.37941 -23.75952 -22.92846 -20.87533 -20.65482 -19.58641 -19.01303 -18.78862 -17.87893 -17.78675 -17.38900 -16.90276 -16.66548 -16.48762 -16.39429 -16.28842 -16.15591 -15.97105 -15.76724 -15.50645 -15.03682 -14.58407 -14.40606 -14.28948 -14.08401 -13.61720 -13.47570 -13.43279 -13.32341 -13.22952 -13.00312 -12.86219 -12.78847 -12.67237 -12.45639 -12.32352 -12.12539 -11.97511 -11.71234 -11.56702 -11.26990 -10.98797 -10.87244 -10.34028 -10.02016 -9.92675 -5.09550 -0.49537 -0.29830 1.07283 1.45742 1.80305 1.83622 2.27069 2.58927 2.77003 3.05483 3.15816 3.35260 3.43243 3.53930 3.55996 3.75072 3.78657 3.79858 3.88406 3.95878 4.06953 4.08324 4.15912 4.24340 4.29436 4.39770 4.42633 4.50361 4.55776 4.55983 4.64132 4.73435 4.74486 4.75453 4.79205 4.81062 4.88252 4.89430 4.91226 5.00897 5.09615 5.14154 5.27352 5.29759 5.31946 5.38885 6.19184 6.20039 6.41797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.362 6.362 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.127 4.127 9 C -0.108 4.108 10 H 0.105 0.895 11 C 0.076 3.924 12 O -0.315 6.315 13 C 0.034 3.966 14 C 0.120 3.880 15 F -0.118 7.118 16 C -0.152 4.152 17 C -0.066 4.066 18 C -0.075 4.075 19 O -0.525 6.525 20 Si 0.686 3.314 21 C -0.126 4.126 22 C 0.116 3.884 23 F -0.119 7.119 24 C -0.147 4.147 25 H 0.064 0.936 26 H 0.066 0.934 27 H 0.058 0.942 28 H 0.063 0.937 29 H 0.070 0.930 30 H 0.063 0.937 31 H 0.059 0.941 32 H 0.067 0.933 33 H 0.065 0.935 34 H 0.078 0.922 35 H 0.093 0.907 36 H 0.060 0.940 37 H 0.061 0.939 38 H 0.152 0.848 39 H 0.129 0.871 40 H 0.379 0.621 41 H -0.256 1.256 42 H -0.251 1.251 43 H 0.153 0.847 44 H 0.091 0.909 45 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.175 -1.534 -0.950 1.813 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.164 4.164 9 C -0.127 4.127 10 H 0.123 0.877 11 C 0.002 3.998 12 O -0.232 6.232 13 C -0.012 4.012 14 C 0.100 3.900 15 F -0.096 7.096 16 C -0.170 4.170 17 C -0.067 4.067 18 C -0.185 4.185 19 O -0.331 6.331 20 Si 0.586 3.414 21 C -0.145 4.145 22 C 0.095 3.905 23 F -0.097 7.097 24 C -0.184 4.184 25 H 0.083 0.917 26 H 0.085 0.915 27 H 0.077 0.923 28 H 0.082 0.918 29 H 0.089 0.911 30 H 0.082 0.918 31 H 0.078 0.922 32 H 0.087 0.913 33 H 0.084 0.916 34 H 0.096 0.904 35 H 0.111 0.889 36 H 0.078 0.922 37 H 0.079 0.921 38 H 0.169 0.831 39 H 0.147 0.853 40 H 0.227 0.773 41 H -0.181 1.181 42 H -0.175 1.175 43 H 0.170 0.830 44 H 0.109 0.891 45 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 0.251 -1.844 -0.361 1.895 hybrid contribution 0.641 0.913 -0.322 1.161 sum 0.891 -0.931 -0.683 1.459 Atomic orbital electron populations 1.22471 0.95441 1.02559 1.02917 1.21542 0.93272 0.93262 0.85367 1.21770 1.01980 0.93238 1.02621 1.22470 1.02306 1.00873 0.97991 1.88034 1.73829 1.23299 1.42921 1.23570 0.95602 0.82794 0.97599 0.88958 1.23231 0.96370 0.97333 0.99479 1.22299 0.98564 0.98120 0.93668 0.87667 1.22915 0.87159 0.95166 0.94578 1.86167 1.42876 1.74410 1.19722 1.18608 1.03937 0.93217 0.85443 1.17595 0.97452 0.88822 0.86145 1.91568 1.84439 1.70032 1.63567 1.21034 1.03717 1.01659 0.90597 1.20004 0.96773 0.93561 0.96353 1.25097 1.02599 1.03275 0.87485 1.86638 1.27038 1.60475 1.58952 0.94887 0.83430 0.79345 0.83733 1.21050 1.01599 0.97825 0.94031 1.17781 0.98170 0.82152 0.92351 1.91569 1.83331 1.42181 1.92595 1.23612 0.99074 0.96250 0.99506 0.91657 0.91531 0.92263 0.91781 0.91062 0.91759 0.92214 0.91349 0.91616 0.90352 0.88869 0.92169 0.92104 0.83128 0.85342 0.77337 1.18054 1.17525 0.82954 0.89084 0.90884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.01 8.38 37.16 0.31 0.33 16 2 C 0.10 0.06 1.11 -90.62 -0.10 -0.04 16 3 C -0.14 -0.01 8.84 37.16 0.33 0.32 16 4 C -0.18 0.07 8.38 37.16 0.31 0.38 16 5 O -0.36 -0.78 10.00 -35.23 -0.35 -1.13 16 6 C 0.06 0.03 2.82 -25.91 -0.07 -0.04 16 7 H 0.09 -0.04 5.55 -51.93 -0.29 -0.33 16 8 C -0.13 0.03 7.47 -25.92 -0.19 -0.16 16 9 C -0.11 -0.02 4.01 -89.81 -0.36 -0.38 16 10 H 0.11 0.00 8.14 -51.93 -0.42 -0.42 16 11 C 0.08 0.07 5.90 37.16 0.22 0.29 16 12 O -0.31 -0.93 9.79 -19.78 -0.19 -1.13 16 13 C 0.03 0.07 5.74 -39.14 -0.22 -0.15 16 14 C 0.12 0.13 7.31 -39.31 -0.29 -0.16 16 15 F -0.12 -0.25 17.11 2.25 0.04 -0.21 16 16 C -0.15 0.16 8.64 -39.52 -0.34 -0.18 16 17 C -0.07 0.09 5.39 -104.61 -0.56 -0.48 16 18 C -0.07 0.16 2.82 36.01 0.10 0.26 16 19 O -0.52 0.34 12.77 -35.23 -0.45 -0.11 16 20 Si 0.69 -1.68 29.78 -169.99 -5.06 -6.74 16 21 C -0.13 0.03 9.58 -39.53 -0.38 -0.35 16 22 C 0.12 0.18 7.31 -39.31 -0.29 -0.11 16 23 F -0.12 -0.35 17.11 2.25 0.04 -0.31 16 24 C -0.15 -0.10 7.46 -25.92 -0.19 -0.29 16 25 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 26 H 0.07 -0.06 8.14 -51.92 -0.42 -0.48 16 27 H 0.06 -0.01 7.02 -51.93 -0.36 -0.38 16 28 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 30 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.06 -0.04 6.25 -51.93 -0.32 -0.37 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 35 H 0.09 0.01 8.10 -51.93 -0.42 -0.41 16 36 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 37 H 0.06 0.05 7.84 -51.93 -0.41 -0.35 16 38 H 0.15 -0.44 4.87 -52.49 -0.26 -0.70 16 39 H 0.13 -0.40 7.96 -51.93 -0.41 -0.81 16 40 H 0.38 -1.32 8.70 45.56 0.40 -0.92 16 41 H -0.26 0.14 7.11 56.52 0.40 0.54 16 42 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 43 H 0.15 -0.18 8.06 -52.49 -0.42 -0.60 16 44 H 0.09 0.14 7.90 -51.93 -0.41 -0.27 16 45 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 LS Contribution 373.74 15.07 5.63 5.63 Total: 0.00 -5.16 373.74 -8.84 -13.99 By element: Atomic # 1 Polarization: -2.47 SS G_CDS: -6.76 Total: -9.22 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -1.73 Total: -0.77 kcal Atomic # 8 Polarization: -1.37 SS G_CDS: -1.00 Total: -2.37 kcal Atomic # 9 Polarization: -0.60 SS G_CDS: 0.08 Total: -0.52 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.06 Total: -6.74 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -5.16 -8.84 -13.99 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_6672274_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -139.868 kcal (2) G-P(sol) polarization free energy of solvation -5.156 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.863 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds