Wall clock time and date at job start Mon Mar 8 2021 08:37:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50698 * 109.47321 * 239.99522 * 2 1 3 5 5 C 1.38258 * 119.92744 * 119.72315 * 4 2 1 6 6 C 1.38370 * 120.06841 * 179.76903 * 5 4 2 7 7 F 1.35098 * 120.03604 * 180.25293 * 6 5 4 8 8 C 1.38840 * 119.92805 * 0.51219 * 6 5 4 9 9 O 1.36008 * 120.06799 * 179.72585 * 8 6 5 10 10 C 1.42905 * 116.99914 * 270.02105 * 9 8 6 11 11 C 1.53002 * 109.47237 * 180.02562 * 10 9 8 12 12 H 1.09007 * 109.46699 * 305.00246 * 11 10 9 13 13 C 1.52995 * 109.47086 * 64.99319 * 11 10 9 14 14 C 1.52999 * 109.47415 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.46822 * 300.00435 * 14 13 11 16 16 H 1.08998 * 109.47661 * 299.99455 * 15 14 13 17 17 O 1.42903 * 109.46981 * 179.97438 * 15 14 13 18 18 C 1.52994 * 109.47270 * 59.99934 * 15 14 13 19 19 C 1.52995 * 109.47319 * 184.99920 * 11 10 9 20 20 C 1.38829 * 119.86208 * 359.74432 * 8 6 5 21 21 F 1.35097 * 120.03613 * 179.97438 * 20 8 6 22 22 C 1.38247 * 119.93128 * 300.00563 * 4 2 1 23 23 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 24 24 H 1.09001 * 109.47103 * 119.99412 * 2 1 3 25 25 H 1.48504 * 110.00018 * 298.67819 * 3 2 1 26 26 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 27 27 H 1.08002 * 119.96178 * 0.02562 * 5 4 2 28 28 H 1.09003 * 109.46593 * 299.99475 * 10 9 8 29 29 H 1.08997 * 109.47031 * 59.99937 * 10 9 8 30 30 H 1.09004 * 109.47716 * 300.00398 * 13 11 10 31 31 H 1.09001 * 109.47126 * 60.00425 * 13 11 10 32 32 H 1.08995 * 109.47419 * 180.02562 * 14 13 11 33 33 H 1.08998 * 109.47213 * 60.00197 * 14 13 11 34 34 H 0.96704 * 113.99868 * 60.00342 * 17 15 14 35 35 H 1.09004 * 109.47506 * 179.97438 * 18 15 14 36 36 H 1.09001 * 109.47499 * 59.99617 * 18 15 14 37 37 H 1.08998 * 109.46739 * 300.00088 * 19 11 10 38 38 H 1.08996 * 109.47372 * 59.99485 * 19 11 10 39 39 H 1.08002 * 119.96709 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7215 -0.0355 -2.1424 6 6 3.1883 -0.6864 -3.2707 7 9 3.9645 -0.0277 -4.1588 8 6 2.8537 -2.0156 -3.4918 9 8 3.3064 -2.6566 -4.6027 10 6 2.4825 -2.5943 -5.7686 11 6 3.1507 -3.3676 -6.9073 12 1 4.1581 -2.9824 -7.0658 13 6 3.2238 -4.8514 -6.5419 14 6 3.8926 -5.6247 -7.6802 15 6 3.0744 -5.4546 -8.9619 16 1 2.0671 -5.8399 -8.8038 17 8 3.6994 -6.1763 -10.0252 18 6 3.0014 -3.9707 -9.3272 19 6 2.3321 -3.1974 -8.1886 20 6 2.0558 -2.6890 -2.5768 21 9 1.7277 -3.9823 -2.7887 22 6 1.5965 -2.0341 -1.4477 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5137 0.8900 25 1 1.5879 2.4585 -1.2243 26 1 1.5614 2.4679 1.2084 27 1 2.9779 0.9996 -1.9718 28 1 1.5106 -3.0371 -5.5507 29 1 2.3497 -1.5537 -6.0645 30 1 3.8071 -4.9727 -5.6291 31 1 2.2166 -5.2366 -6.3833 32 1 3.9443 -6.6819 -7.4202 33 1 4.8999 -5.2394 -7.8385 34 1 3.7798 -7.1260 -9.8619 35 1 2.4189 -3.8496 -10.2405 36 1 4.0087 -3.5854 -9.4854 37 1 1.3248 -3.5826 -8.0299 38 1 2.2800 -2.1403 -8.4488 39 1 0.9758 -2.5574 -0.7355 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_6672274_16737256.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:37:34 Heat of formation + Delta-G solvation = -193.104541 kcal Electronic energy + Delta-G solvation = -24916.539168 eV Core-core repulsion = 20847.572623 eV Total energy + Delta-G solvation = -4068.966545 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.121 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -50.12539 -50.08897 -41.09092 -40.27037 -39.19020 -37.55302 -36.64328 -32.59623 -31.86984 -31.71888 -31.25854 -27.30878 -26.07468 -24.41518 -23.84181 -23.02138 -22.35445 -20.93460 -19.61256 -19.05557 -18.80518 -18.19496 -17.82149 -17.53094 -16.93734 -16.72108 -16.42512 -16.41177 -16.32494 -16.11711 -15.79766 -15.57911 -15.48513 -14.71961 -14.56818 -14.34176 -14.09949 -13.88271 -13.48871 -13.32636 -13.29419 -13.25130 -12.85045 -12.57458 -12.39216 -12.15707 -11.99891 -11.73267 -11.68227 -11.24772 -11.06635 -10.90073 -10.72429 -10.05195 -9.95684 -5.11270 -0.52629 -0.32770 1.05268 1.43836 1.77897 1.81739 2.25450 2.59077 3.02871 3.12984 3.15069 3.32461 3.48132 3.59072 3.65812 3.73743 3.76723 4.02718 4.03136 4.12198 4.21612 4.27787 4.29977 4.37170 4.37984 4.41632 4.43566 4.50961 4.56042 4.70586 4.75117 4.86650 4.90699 5.00552 5.05269 5.11447 5.12286 5.23482 5.31666 5.39414 6.15715 6.17688 6.70192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.075 4.075 3 Si 0.686 3.314 4 C -0.066 4.066 5 C -0.151 4.151 6 C 0.120 3.880 7 F -0.118 7.118 8 C 0.034 3.966 9 O -0.314 6.314 10 C 0.067 3.933 11 C -0.086 4.086 12 H 0.086 0.914 13 C -0.110 4.110 14 C -0.152 4.152 15 C 0.103 3.897 16 H 0.055 0.945 17 O -0.569 6.569 18 C -0.111 4.111 19 C -0.110 4.110 20 C 0.115 3.885 21 F -0.119 7.119 22 C -0.126 4.126 23 H 0.379 0.621 24 H 0.129 0.871 25 H -0.256 1.256 26 H -0.250 1.250 27 H 0.152 0.848 28 H 0.059 0.941 29 H 0.059 0.941 30 H 0.075 0.925 31 H 0.064 0.936 32 H 0.066 0.934 33 H 0.072 0.928 34 H 0.379 0.621 35 H 0.073 0.927 36 H 0.072 0.928 37 H 0.068 0.932 38 H 0.074 0.926 39 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.406 1.044 1.386 1.782 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.185 4.185 3 Si 0.586 3.414 4 C -0.067 4.067 5 C -0.170 4.170 6 C 0.100 3.900 7 F -0.096 7.096 8 C -0.012 4.012 9 O -0.231 6.231 10 C -0.007 4.007 11 C -0.105 4.105 12 H 0.104 0.896 13 C -0.148 4.148 14 C -0.190 4.190 15 C 0.044 3.956 16 H 0.073 0.927 17 O -0.375 6.375 18 C -0.148 4.148 19 C -0.147 4.147 20 C 0.095 3.905 21 F -0.097 7.097 22 C -0.145 4.145 23 H 0.227 0.773 24 H 0.147 0.853 25 H -0.180 1.180 26 H -0.175 1.175 27 H 0.169 0.831 28 H 0.077 0.923 29 H 0.078 0.922 30 H 0.093 0.907 31 H 0.082 0.918 32 H 0.085 0.915 33 H 0.091 0.909 34 H 0.226 0.774 35 H 0.092 0.908 36 H 0.091 0.909 37 H 0.087 0.913 38 H 0.092 0.908 39 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -0.330 2.041 1.592 2.609 hybrid contribution -1.132 -0.850 -0.454 1.486 sum -1.462 1.191 1.138 2.203 Atomic orbital electron populations 1.86640 1.17060 1.79970 1.49428 1.25096 0.84402 1.11325 0.97641 0.94871 0.91656 0.73907 0.80977 1.20006 0.96517 0.93655 0.96474 1.21041 1.00838 1.01438 0.93683 1.17601 0.94144 0.88841 0.89413 1.91572 1.71570 1.79993 1.66449 1.18601 1.00891 0.90518 0.91177 1.86155 1.46396 1.72629 1.17912 1.23008 0.93583 1.00351 0.83798 1.21213 1.00804 0.95866 0.92568 0.89562 1.21500 1.01374 0.93498 0.98412 1.22278 1.00585 1.00805 0.95299 1.21846 0.94896 0.92774 0.86085 0.92740 1.86518 1.83071 1.24178 1.43744 1.21444 1.02207 0.92899 0.98291 1.21484 0.99097 1.00917 0.93237 1.17773 0.97016 0.79928 0.95768 1.91565 1.90444 1.33052 1.94662 1.21050 1.01749 0.94716 0.96988 0.77346 0.85331 1.18046 1.17500 0.83129 0.92308 0.92228 0.90657 0.91772 0.91500 0.90913 0.77382 0.90823 0.90890 0.91308 0.90777 0.82957 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.48 12.77 -35.23 -0.45 0.03 16 2 C -0.08 0.17 2.82 36.00 0.10 0.28 16 3 Si 0.69 -1.81 29.78 -169.99 -5.06 -6.87 16 4 C -0.07 0.11 5.39 -104.61 -0.56 -0.46 16 5 C -0.15 0.20 8.64 -39.53 -0.34 -0.14 16 6 C 0.12 0.09 7.31 -39.31 -0.29 -0.20 16 7 F -0.12 -0.22 17.11 2.25 0.04 -0.18 16 8 C 0.03 0.05 5.74 -39.14 -0.22 -0.17 16 9 O -0.31 -0.73 9.32 -19.77 -0.18 -0.91 16 10 C 0.07 0.02 5.44 37.16 0.20 0.22 16 11 C -0.09 0.03 2.43 -90.62 -0.22 -0.19 16 12 H 0.09 0.04 8.14 -51.93 -0.42 -0.39 16 13 C -0.11 0.01 5.10 -26.73 -0.14 -0.13 16 14 C -0.15 0.04 5.55 -26.73 -0.15 -0.10 16 15 C 0.10 0.02 3.47 -26.73 -0.09 -0.07 16 16 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 17 O -0.57 -0.80 13.32 -35.23 -0.47 -1.26 16 18 C -0.11 -0.01 5.57 -26.71 -0.15 -0.15 16 19 C -0.11 0.13 5.21 -26.71 -0.14 -0.01 16 20 C 0.12 0.12 7.31 -39.31 -0.29 -0.17 16 21 F -0.12 -0.27 17.11 2.25 0.04 -0.23 16 22 C -0.13 0.08 9.58 -39.53 -0.38 -0.29 16 23 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 24 H 0.13 -0.43 7.96 -51.93 -0.41 -0.84 16 25 H -0.26 0.19 7.11 56.52 0.40 0.59 16 26 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 27 H 0.15 -0.47 4.87 -52.49 -0.26 -0.73 16 28 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 29 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.07 0.08 7.82 -51.93 -0.41 -0.33 16 31 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.38 -0.93 9.08 45.56 0.41 -0.51 16 35 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.15 -0.24 8.06 -52.49 -0.42 -0.66 16 LS Contribution 329.23 15.07 4.96 4.96 Total: 0.00 -5.91 329.23 -8.33 -14.23 By element: Atomic # 1 Polarization: -3.63 SS G_CDS: -4.54 Total: -8.17 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: -2.66 Total: -1.60 kcal Atomic # 8 Polarization: -1.04 SS G_CDS: -1.10 Total: -2.15 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.08 Total: -0.41 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: -5.06 Total: -6.87 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -5.91 -8.33 -14.23 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_6672274_16737256.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -178.871 kcal (2) G-P(sol) polarization free energy of solvation -5.906 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -184.776 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.328 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.234 kcal (6) G-S(sol) free energy of system = (1) + (5) -193.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds