Wall clock time and date at job start Mon Mar 8 2021 08:57:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53000 * 109.47174 * 2 1 4 4 C 1.52999 * 109.47503 * 239.99617 * 2 1 3 5 5 Si 1.86303 * 109.47258 * 119.99810 * 2 1 3 6 6 C 1.86308 * 109.47076 * 299.99993 * 5 2 1 7 7 C 1.86296 * 109.47040 * 180.02562 * 5 2 1 8 8 O 1.63096 * 109.47337 * 59.99942 * 5 2 1 9 9 C 1.42898 * 114.00209 * 179.97438 * 8 5 2 10 10 C 1.53001 * 109.47145 * 179.97438 * 9 8 5 11 11 C 1.53000 * 109.46886 * 179.97438 * 10 9 8 12 12 O 1.42903 * 109.46726 * 180.02562 * 11 10 9 13 13 C 1.35925 * 116.99722 * 180.02562 * 12 11 10 14 14 C 1.38647 * 120.05600 * 359.97438 * 13 12 11 15 15 C 1.38297 * 119.94871 * 180.02562 * 14 13 12 16 16 Cl 1.73603 * 119.97720 * 180.02562 * 15 14 13 17 17 C 1.38353 * 120.05176 * 359.97438 * 15 14 13 18 18 C 1.50702 * 119.95007 * 179.97438 * 17 15 14 19 19 O 1.42901 * 109.46927 * 284.99752 * 18 17 15 20 20 Si 1.86295 * 109.47038 * 164.99466 * 18 17 15 21 21 H 1.48502 * 109.47043 * 59.99966 * 20 18 17 22 22 H 1.48496 * 109.47130 * 179.97438 * 20 18 17 23 23 H 1.48497 * 109.47356 * 299.99818 * 20 18 17 24 24 C 1.38273 * 120.10273 * 0.02562 * 17 15 14 25 25 C 1.38217 * 120.05375 * 359.72865 * 24 17 15 26 26 Cl 1.73604 * 120.02423 * 180.29742 * 25 24 17 27 27 H 1.08998 * 109.46855 * 300.00219 * 1 2 3 28 28 H 1.08994 * 109.46913 * 60.00573 * 1 2 3 29 29 H 1.09005 * 109.46550 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47503 * 180.02562 * 3 2 1 31 31 H 1.09006 * 109.46847 * 299.99997 * 3 2 1 32 32 H 1.09001 * 109.47185 * 59.99654 * 3 2 1 33 33 H 1.09000 * 109.46985 * 300.00228 * 4 2 1 34 34 H 1.09006 * 109.46759 * 59.99855 * 4 2 1 35 35 H 1.09000 * 109.47380 * 179.97438 * 4 2 1 36 36 H 1.08993 * 109.46878 * 180.02562 * 6 5 2 37 37 H 1.09008 * 109.46916 * 300.00134 * 6 5 2 38 38 H 1.08999 * 109.46987 * 59.99664 * 6 5 2 39 39 H 1.09001 * 109.47243 * 299.99745 * 7 5 2 40 40 H 1.09000 * 109.47509 * 59.99848 * 7 5 2 41 41 H 1.09006 * 109.47013 * 179.97438 * 7 5 2 42 42 H 1.09001 * 109.46621 * 60.00038 * 9 8 5 43 43 H 1.09002 * 109.47259 * 300.00299 * 9 8 5 44 44 H 1.09001 * 109.46652 * 60.00333 * 10 9 8 45 45 H 1.08992 * 109.47514 * 300.00423 * 10 9 8 46 46 H 1.09002 * 109.47398 * 300.00496 * 11 10 9 47 47 H 1.09001 * 109.47194 * 60.00677 * 11 10 9 48 48 H 1.08004 * 120.02624 * 359.97438 * 14 13 12 49 49 H 1.08999 * 109.46749 * 44.99380 * 18 17 15 50 50 H 0.96704 * 113.99888 * 299.99797 * 19 18 17 51 51 H 1.07999 * 119.97371 * 180.02562 * 24 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 14 2.1511 -0.8782 1.5212 6 6 1.5300 0.0001 3.0424 7 6 4.0140 -0.8775 1.5215 8 8 1.6074 -2.4159 1.5213 9 6 2.0296 -3.1816 2.6516 10 6 1.4637 -4.5992 2.5474 11 6 1.9162 -5.4192 3.7572 12 8 1.3881 -6.7434 3.6596 13 6 1.6978 -7.6068 4.6627 14 6 2.4935 -7.1882 5.7182 15 6 2.8077 -8.0686 6.7374 16 17 3.8034 -7.5451 8.0597 17 6 2.3282 -9.3660 6.7047 18 6 2.6725 -10.3236 7.8162 19 8 4.0281 -10.7524 7.6727 20 14 1.5416 -11.8018 7.7349 21 1 1.7096 -12.4821 6.4256 22 1 1.8812 -12.7457 8.8298 23 1 0.1329 -11.3562 7.8840 24 6 1.5345 -9.7857 5.6531 25 6 1.2137 -8.9079 4.6347 26 17 0.2107 -9.4334 3.3188 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5137 -0.8900 29 1 -0.3632 -1.0277 0.0005 30 1 3.1300 1.4426 -0.0005 31 1 1.6766 1.9563 -0.8900 32 1 1.6766 1.9564 0.8900 33 1 1.6767 -1.7490 -1.2491 34 1 1.6767 -0.2075 -2.1392 35 1 3.1301 -0.7209 -1.2494 36 1 1.8938 -0.5134 3.9323 37 1 1.8934 1.0279 3.0423 38 1 0.4400 0.0002 3.0423 39 1 4.3777 -1.3911 0.6315 40 1 4.3770 0.1503 1.5217 41 1 4.3774 -1.3909 2.4118 42 1 1.6655 -2.7116 3.5652 43 1 3.1185 -3.2254 2.6746 44 1 1.8274 -5.0693 1.6337 45 1 0.3749 -4.5551 2.5246 46 1 3.0051 -5.4633 3.7796 47 1 1.5528 -4.9492 4.6711 48 1 2.8684 -6.1757 5.7440 49 1 2.5492 -9.8242 8.7772 50 1 4.2109 -11.2060 6.8385 51 1 1.1610 -10.7988 5.6298 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_7874536_18527726.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:57:36 Heat of formation + Delta-G solvation = -166.650990 kcal Electronic energy + Delta-G solvation = -29786.037609 eV Core-core repulsion = 25474.470723 eV Total energy + Delta-G solvation = -4311.566886 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 394.109 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.66041 -39.68350 -38.36279 -37.78829 -37.59348 -36.97842 -36.88610 -33.80414 -32.25690 -31.57163 -29.50991 -29.15573 -27.91828 -27.43915 -27.43247 -26.16890 -24.43857 -22.86486 -22.46746 -20.48255 -19.78578 -18.51654 -18.17374 -17.72004 -17.43980 -17.03562 -16.54482 -16.33566 -16.07164 -15.99778 -15.75968 -15.42038 -15.07087 -14.94092 -14.89248 -14.74822 -14.68317 -14.08651 -14.03285 -13.81399 -13.53932 -13.51608 -13.38083 -13.35072 -13.23653 -13.03583 -12.98023 -12.95838 -12.62761 -12.45806 -12.38062 -12.25599 -12.22761 -12.00550 -11.91487 -11.82388 -11.76072 -11.72050 -11.69121 -11.50732 -11.41724 -10.53252 -10.44850 -10.13320 -10.11375 -9.38726 -0.31796 -0.15584 0.87636 1.01900 1.08084 1.25388 1.32385 1.44339 1.66407 1.83622 1.86580 1.97544 2.10907 2.38655 3.27961 3.34556 3.54547 3.61750 3.66754 3.77617 3.87765 4.00513 4.06537 4.07424 4.09299 4.12843 4.17155 4.24213 4.33062 4.42127 4.53774 4.59361 4.59486 4.63305 4.65152 4.65821 4.76413 4.81017 4.87664 4.89072 4.91831 4.95315 5.05931 5.06182 5.10772 5.14941 5.29188 5.34669 5.36540 5.45183 5.47792 5.53314 5.96269 6.47542 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.375 4.375 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.288 2.712 6 C -0.512 4.512 7 C -0.512 4.512 8 O -0.623 6.623 9 C 0.090 3.910 10 C -0.123 4.123 11 C 0.053 3.947 12 O -0.292 6.292 13 C 0.163 3.837 14 C -0.193 4.193 15 C 0.034 3.966 16 Cl -0.039 7.039 17 C -0.140 4.140 18 C -0.076 4.076 19 O -0.528 6.528 20 Si 0.939 3.061 21 H -0.247 1.247 22 H -0.246 1.246 23 H -0.244 1.244 24 C -0.069 4.069 25 C -0.063 4.063 26 Cl -0.040 7.040 27 H 0.054 0.946 28 H 0.053 0.947 29 H 0.060 0.940 30 H 0.056 0.944 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.060 0.940 34 H 0.053 0.947 35 H 0.054 0.946 36 H 0.066 0.934 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.073 0.927 40 H 0.074 0.926 41 H 0.066 0.934 42 H 0.059 0.941 43 H 0.059 0.941 44 H 0.088 0.912 45 H 0.088 0.912 46 H 0.071 0.929 47 H 0.071 0.929 48 H 0.151 0.849 49 H 0.122 0.878 50 H 0.376 0.624 51 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.565 1.269 0.476 1.468 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.419 4.419 3 C -0.194 4.194 4 C -0.192 4.192 5 Si 1.420 2.580 6 C -0.613 4.613 7 C -0.613 4.613 8 O -0.582 6.582 9 C 0.014 3.986 10 C -0.160 4.160 11 C -0.022 4.022 12 O -0.205 6.205 13 C 0.115 3.885 14 C -0.213 4.213 15 C 0.007 3.993 16 Cl -0.010 7.010 17 C -0.142 4.142 18 C -0.186 4.186 19 O -0.333 6.333 20 Si 0.761 3.239 21 H -0.171 1.171 22 H -0.169 1.169 23 H -0.167 1.167 24 C -0.087 4.087 25 C -0.091 4.091 26 Cl -0.011 7.011 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.079 0.921 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.079 0.921 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.085 0.915 37 H 0.093 0.907 38 H 0.092 0.908 39 H 0.092 0.908 40 H 0.094 0.906 41 H 0.085 0.915 42 H 0.077 0.923 43 H 0.077 0.923 44 H 0.106 0.894 45 H 0.106 0.894 46 H 0.089 0.911 47 H 0.089 0.911 48 H 0.169 0.831 49 H 0.140 0.860 50 H 0.223 0.777 51 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -0.210 0.622 0.706 0.964 hybrid contribution 0.599 0.925 -0.329 1.150 sum 0.389 1.546 0.377 1.638 Atomic orbital electron populations 1.21515 0.93777 1.02037 1.01822 1.25788 1.00724 1.02649 1.12705 1.21558 1.00776 0.94888 1.02182 1.21516 1.00600 1.00265 0.96772 0.76696 0.63010 0.53285 0.65041 1.27038 1.07065 1.09554 1.17680 1.27038 1.25017 1.04817 1.04469 1.85332 1.79312 1.46084 1.47454 1.21790 0.98133 0.91414 0.87269 1.21516 1.03563 0.93170 0.97793 1.22871 0.98931 0.80277 1.00092 1.86189 1.70184 1.22034 1.42080 1.18446 0.93364 0.88875 0.87833 1.21120 1.03853 1.01701 0.94619 1.20544 0.94805 0.93159 0.90801 1.98420 1.67129 1.90152 1.45298 1.20046 1.01142 0.94640 0.98344 1.24941 0.91357 1.03271 0.99071 1.86583 1.25172 1.78444 1.43095 0.85836 0.78779 0.77530 0.81761 1.17078 1.16923 1.16724 1.20851 0.96646 0.99687 0.91542 1.20127 1.02327 0.92172 0.94429 1.98409 1.66844 1.89971 1.45914 0.92700 0.92759 0.92136 0.92507 0.92471 0.92506 0.92133 0.92765 0.92696 0.91504 0.90650 0.90817 0.90814 0.90648 0.91501 0.92324 0.92312 0.89384 0.89377 0.91111 0.91108 0.83150 0.85999 0.77699 0.83381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.03 7.85 37.16 0.29 0.33 16 2 C -0.38 0.25 0.53 -90.62 -0.05 0.21 16 3 C -0.14 0.13 7.85 37.16 0.29 0.42 16 4 C -0.13 0.03 7.85 37.16 0.29 0.32 16 5 Si 1.29 -2.20 8.45 -169.99 -1.44 -3.64 16 6 C -0.51 0.72 8.50 101.05 0.86 1.58 16 7 C -0.51 0.72 8.50 101.05 0.86 1.57 16 8 O -0.62 0.36 8.56 -35.23 -0.30 0.06 16 9 C 0.09 -0.20 5.12 37.16 0.19 -0.01 16 10 C -0.12 0.22 5.95 -26.73 -0.16 0.06 16 11 C 0.05 -0.12 4.74 37.16 0.18 0.06 16 12 O -0.29 -0.17 9.60 -19.51 -0.19 -0.36 16 13 C 0.16 0.11 6.68 -39.20 -0.26 -0.15 16 14 C -0.19 0.06 8.82 -39.41 -0.35 -0.28 16 15 C 0.03 0.01 6.31 -39.52 -0.25 -0.24 16 16 Cl -0.04 -0.03 27.58 -51.86 -1.43 -1.46 16 17 C -0.14 0.01 5.26 -104.57 -0.55 -0.54 16 18 C -0.08 0.06 2.09 36.01 0.08 0.14 16 19 O -0.53 0.21 12.83 -35.23 -0.45 -0.24 16 20 Si 0.94 -1.13 25.49 -169.99 -4.33 -5.47 16 21 H -0.25 0.38 6.73 56.52 0.38 0.76 16 22 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 23 H -0.24 0.13 7.11 56.52 0.40 0.53 16 24 C -0.07 0.00 8.44 -39.58 -0.33 -0.33 16 25 C -0.06 -0.07 6.33 -39.36 -0.25 -0.32 16 26 Cl -0.04 -0.07 28.50 -51.86 -1.48 -1.55 16 27 H 0.05 -0.05 7.79 -51.93 -0.40 -0.45 16 28 H 0.05 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.06 0.00 7.96 -51.93 -0.41 -0.41 16 30 H 0.06 -0.09 7.79 -51.93 -0.40 -0.49 16 31 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.06 -0.09 7.79 -51.93 -0.40 -0.49 16 33 H 0.06 0.00 7.96 -51.93 -0.41 -0.41 16 34 H 0.05 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.05 -0.05 7.79 -51.93 -0.40 -0.45 16 36 H 0.07 -0.13 7.48 -51.93 -0.39 -0.51 16 37 H 0.07 -0.12 7.79 -51.92 -0.40 -0.52 16 38 H 0.07 -0.08 7.79 -51.93 -0.40 -0.48 16 39 H 0.07 -0.08 7.79 -51.93 -0.40 -0.48 16 40 H 0.07 -0.12 7.79 -51.93 -0.40 -0.52 16 41 H 0.07 -0.13 7.48 -51.93 -0.39 -0.51 16 42 H 0.06 -0.22 7.21 -51.93 -0.37 -0.59 16 43 H 0.06 -0.22 7.21 -51.93 -0.37 -0.59 16 44 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 45 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 46 H 0.07 -0.25 7.66 -51.93 -0.40 -0.65 16 47 H 0.07 -0.25 7.66 -51.93 -0.40 -0.65 16 48 H 0.15 -0.35 6.30 -52.48 -0.33 -0.68 16 49 H 0.12 -0.13 7.40 -51.93 -0.38 -0.51 16 50 H 0.38 -1.38 8.70 45.56 0.40 -0.98 16 51 H 0.15 -0.20 4.88 -52.49 -0.26 -0.45 16 LS Contribution 433.73 15.07 6.54 6.54 Total: 0.00 -4.69 433.73 -10.14 -14.83 By element: Atomic # 1 Polarization: -3.64 SS G_CDS: -7.89 Total: -11.54 kcal Atomic # 6 Polarization: 1.99 SS G_CDS: 0.83 Total: 2.82 kcal Atomic # 8 Polarization: 0.40 SS G_CDS: -0.94 Total: -0.54 kcal Atomic # 14 Polarization: -3.34 SS G_CDS: -5.77 Total: -9.10 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -2.91 Total: -3.00 kcal Total LS contribution 6.54 Total: 6.54 kcal Total: -4.69 -10.14 -14.83 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_7874536_18527726.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.824 kcal (2) G-P(sol) polarization free energy of solvation -4.688 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -156.512 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.827 kcal (6) G-S(sol) free energy of system = (1) + (5) -166.651 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds