Wall clock time and date at job start Mon Mar 8 2021 09:18:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.38704 * 120.01944 * 2 1 4 4 O 1.35919 * 120.04214 * 0.02562 * 3 2 1 5 5 C 1.42901 * 116.99997 * 89.99770 * 4 3 2 6 6 C 1.53002 * 109.46914 * 179.97438 * 5 4 3 7 7 H 1.09002 * 109.47097 * 55.00053 * 6 5 4 8 8 C 1.53005 * 109.47197 * 174.99854 * 6 5 4 9 9 C 1.52997 * 109.47452 * 180.02562 * 8 6 5 10 10 C 1.53002 * 109.46817 * 300.00239 * 9 8 6 11 11 H 1.08992 * 109.47063 * 299.99823 * 10 9 8 12 12 O 1.42903 * 109.46923 * 179.97438 * 10 9 8 13 13 C 1.53000 * 109.47233 * 60.00194 * 10 9 8 14 14 C 1.52997 * 109.47060 * 299.99657 * 13 10 9 15 15 C 1.38739 * 119.91551 * 180.27450 * 3 2 1 16 16 C 1.50703 * 120.02429 * 179.72482 * 15 3 2 17 17 O 1.42904 * 109.46807 * 285.00245 * 16 15 3 18 18 Si 1.86299 * 109.47304 * 165.00221 * 16 15 3 19 19 C 1.38124 * 119.95634 * 359.49615 * 15 3 2 20 20 C 1.38390 * 120.03900 * 0.50897 * 19 15 3 21 21 Cl 1.73605 * 119.95516 * 179.77081 * 20 19 15 22 22 C 1.38166 * 120.02173 * 180.02562 * 2 1 3 23 23 H 1.08997 * 109.46781 * 89.99929 * 1 2 3 24 24 H 1.09002 * 109.46749 * 209.99926 * 1 2 3 25 25 H 1.08995 * 109.47012 * 329.99684 * 1 2 3 26 26 H 1.09000 * 109.47465 * 60.00030 * 5 4 3 27 27 H 1.08998 * 109.47172 * 299.99772 * 5 4 3 28 28 H 1.09002 * 109.46935 * 60.00099 * 8 6 5 29 29 H 1.09001 * 109.46812 * 300.00441 * 8 6 5 30 30 H 1.08993 * 109.47194 * 179.97438 * 9 8 6 31 31 H 1.09002 * 109.46695 * 59.99734 * 9 8 6 32 32 H 0.96700 * 113.99509 * 60.00082 * 12 10 9 33 33 H 1.09002 * 109.47398 * 59.99826 * 13 10 9 34 34 H 1.09001 * 109.47194 * 180.02562 * 13 10 9 35 35 H 1.08996 * 109.47853 * 180.02562 * 14 13 10 36 36 H 1.09002 * 109.47153 * 300.00319 * 14 13 10 37 37 H 1.08999 * 109.46922 * 45.00095 * 16 15 3 38 38 H 0.96698 * 113.99783 * 299.99525 * 17 16 15 39 39 H 1.48500 * 110.00007 * 180.02562 * 18 16 15 40 40 H 1.48503 * 109.99881 * 301.32193 * 18 16 15 41 41 H 1.07999 * 119.98244 * 180.23085 * 19 15 3 42 42 H 1.07994 * 119.97852 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2010 1.2010 0.0000 4 8 1.5227 2.3788 0.0005 5 6 1.1993 2.9407 1.2740 6 6 0.4428 4.2555 1.0741 7 1 -0.4281 4.0811 0.4422 8 6 -0.0120 4.7938 2.4322 9 6 -0.7691 6.1082 2.2323 10 6 0.1512 7.1297 1.5609 11 1 1.0220 7.3045 2.1926 12 8 -0.5561 8.3572 1.3737 13 6 0.6059 6.5914 0.2029 14 6 1.3630 5.2770 0.4028 15 6 3.5884 1.1985 -0.0058 16 6 4.3448 2.5019 -0.0120 17 8 4.2768 3.0858 -1.3146 18 14 6.1258 2.1886 0.4358 19 6 4.2759 0.0005 -0.0010 20 6 3.5818 -1.1967 -0.0011 21 17 4.4482 -2.7011 -0.0010 22 6 2.1983 -1.1963 -0.0005 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3633 -0.8900 0.5138 25 1 -0.3633 0.8899 0.5139 26 1 2.1169 3.1309 1.8308 27 1 0.5744 2.2426 1.8311 28 1 0.8588 4.9682 3.0641 29 1 -0.6679 4.0662 2.9102 30 1 -1.0935 6.4914 3.1997 31 1 -1.6400 5.9334 1.6005 32 1 -0.8749 8.7566 2.1946 33 1 -0.2650 6.4167 -0.4289 34 1 1.2619 7.3190 -0.2752 35 1 1.6874 4.8937 -0.5646 36 1 2.2339 5.4518 1.0345 37 1 3.9017 3.1826 0.7149 38 1 4.6539 2.5337 -2.0132 39 1 6.8824 3.4664 0.4338 40 1 6.2083 1.5521 1.7750 41 1 5.3559 -0.0019 -0.0017 42 1 1.6584 -2.1315 -0.0014 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_8270650_16737256.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:18:36 Heat of formation + Delta-G solvation = -115.174139 kcal Electronic energy + Delta-G solvation = -24796.938377 eV Core-core repulsion = 21154.921688 eV Total energy + Delta-G solvation = -3642.016689 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.117 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.63652 -40.18708 -38.68829 -37.89243 -37.29587 -36.59498 -34.05651 -32.23327 -31.85611 -31.05081 -28.17374 -27.13226 -26.14886 -23.83653 -23.05537 -22.34696 -22.18194 -20.90553 -19.07645 -18.33991 -18.22838 -17.65510 -16.98174 -16.80078 -16.45918 -15.98164 -15.59347 -15.54074 -15.22144 -14.88492 -14.78128 -14.63090 -14.29960 -14.13330 -13.92492 -13.77847 -13.62388 -13.37865 -13.21083 -13.01919 -12.82728 -12.49132 -12.38378 -12.21468 -12.14708 -11.99478 -11.86054 -11.67055 -11.61465 -11.21540 -11.00581 -10.73885 -10.40180 -9.99030 -9.54302 -5.09037 -0.17764 -0.01266 1.03519 1.20359 1.56111 1.87634 2.09217 2.63172 3.21524 3.35354 3.52071 3.57616 3.66273 3.68787 3.85982 3.96417 3.99753 4.10522 4.13447 4.14570 4.24776 4.27546 4.35511 4.36954 4.44945 4.46340 4.50604 4.54933 4.66857 4.71991 4.80177 4.92291 4.94612 5.01928 5.03085 5.06237 5.10787 5.11630 5.18191 5.29432 5.30803 5.38368 5.45668 6.42429 6.73007 6.83957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.096 4.096 3 C 0.111 3.889 4 O -0.331 6.331 5 C 0.069 3.931 6 C -0.080 4.080 7 H 0.078 0.922 8 C -0.107 4.107 9 C -0.144 4.144 10 C 0.101 3.899 11 H 0.059 0.941 12 O -0.590 6.590 13 C -0.113 4.113 14 C -0.101 4.101 15 C -0.130 4.130 16 C -0.061 4.061 17 O -0.544 6.544 18 Si 0.759 3.241 19 C -0.101 4.101 20 C -0.040 4.040 21 Cl -0.061 7.061 22 C -0.095 4.095 23 H 0.079 0.921 24 H 0.084 0.916 25 H 0.070 0.930 26 H 0.052 0.948 27 H 0.066 0.934 28 H 0.072 0.928 29 H 0.081 0.919 30 H 0.081 0.919 31 H 0.065 0.935 32 H 0.393 0.607 33 H 0.060 0.940 34 H 0.059 0.941 35 H 0.066 0.934 36 H 0.062 0.938 37 H 0.102 0.898 38 H 0.393 0.607 39 H -0.290 1.290 40 H -0.281 1.281 41 H 0.158 0.842 42 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.546 -2.654 2.194 3.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.097 4.097 3 C 0.067 3.933 4 O -0.248 6.248 5 C -0.005 4.005 6 C -0.099 4.099 7 H 0.096 0.904 8 C -0.145 4.145 9 C -0.182 4.182 10 C 0.043 3.957 11 H 0.077 0.923 12 O -0.399 6.399 13 C -0.151 4.151 14 C -0.138 4.138 15 C -0.131 4.131 16 C -0.171 4.171 17 O -0.352 6.352 18 Si 0.664 3.336 19 C -0.119 4.119 20 C -0.066 4.066 21 Cl -0.032 7.032 22 C -0.113 4.113 23 H 0.098 0.902 24 H 0.103 0.897 25 H 0.088 0.912 26 H 0.071 0.929 27 H 0.084 0.916 28 H 0.091 0.909 29 H 0.099 0.901 30 H 0.100 0.900 31 H 0.084 0.916 32 H 0.243 0.757 33 H 0.079 0.921 34 H 0.078 0.922 35 H 0.085 0.915 36 H 0.081 0.919 37 H 0.119 0.881 38 H 0.242 0.758 39 H -0.217 1.217 40 H -0.208 1.208 41 H 0.175 0.825 42 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -0.039 -2.160 2.315 3.166 hybrid contribution -0.502 0.112 0.821 0.968 sum -0.540 -2.048 3.135 3.784 Atomic orbital electron populations 1.20773 0.88706 1.03764 1.03499 1.20409 0.98086 0.91508 0.99715 1.18524 0.89438 0.85621 0.99694 1.86062 1.74385 1.34552 1.29832 1.22908 0.99009 0.94861 0.83688 1.21156 0.98373 0.92269 0.98079 0.90376 1.21453 1.00784 0.96770 0.95451 1.22182 0.98844 0.95549 1.01583 1.21891 0.93673 0.83617 0.96548 0.92274 1.86494 1.76466 1.38815 1.38095 1.21470 1.00266 0.96901 0.96438 1.21407 0.97580 0.93474 1.01378 1.20661 0.93808 0.95833 1.02771 1.25033 1.09869 0.92685 0.89494 1.86528 1.85327 1.47092 1.16217 0.93931 0.74625 0.81401 0.83645 1.20911 1.00568 0.89692 1.00735 1.20935 0.92762 0.87538 1.05398 1.98404 1.76541 1.31382 1.96849 1.21105 0.91872 0.98991 0.99380 0.90244 0.89678 0.91157 0.92937 0.91553 0.90930 0.90065 0.89991 0.91650 0.75684 0.92093 0.92232 0.91534 0.91941 0.88082 0.75784 1.21739 1.20750 0.82504 0.82780 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.28 9.79 71.24 0.70 0.98 16 2 C -0.10 -0.06 5.89 -19.77 -0.12 -0.18 16 3 C 0.11 0.30 5.67 22.50 0.13 0.43 16 4 O -0.33 -1.17 8.17 -92.64 -0.76 -1.93 16 5 C 0.07 -0.03 4.85 71.98 0.35 0.32 16 6 C -0.08 0.08 2.43 -10.79 -0.03 0.05 16 7 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 8 C -0.11 0.41 5.20 30.60 0.16 0.57 16 9 C -0.14 0.37 5.55 30.59 0.17 0.54 16 10 C 0.10 0.09 3.47 30.60 0.11 0.20 16 11 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 12 O -0.59 -1.96 13.32 -148.98 -1.98 -3.95 16 13 C -0.11 -0.37 5.57 30.59 0.17 -0.20 16 14 C -0.10 -0.18 5.10 30.59 0.16 -0.02 16 15 C -0.13 -0.13 5.27 -19.77 -0.10 -0.24 16 16 C -0.06 -0.04 2.38 71.24 0.17 0.13 16 17 O -0.54 -0.91 12.88 -148.98 -1.92 -2.83 16 18 Si 0.76 -1.11 29.92 68.60 2.05 0.95 16 19 C -0.10 0.08 8.44 22.28 0.19 0.26 16 20 C -0.04 -0.01 6.32 22.33 0.14 0.13 16 21 Cl -0.06 -0.02 28.95 -2.72 -0.08 -0.10 16 22 C -0.09 0.05 9.48 22.28 0.21 0.26 16 23 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 24 H 0.08 -0.46 8.09 -2.39 -0.02 -0.48 16 25 H 0.07 -0.15 6.32 -2.39 -0.02 -0.17 16 26 H 0.05 -0.04 7.13 -2.39 -0.02 -0.06 16 27 H 0.07 -0.17 7.26 -2.39 -0.02 -0.19 16 28 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 29 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 30 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 31 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 32 H 0.39 -2.01 9.08 -74.06 -0.67 -2.68 16 33 H 0.06 0.31 8.14 -2.39 -0.02 0.29 16 34 H 0.06 0.31 8.14 -2.39 -0.02 0.29 16 35 H 0.07 0.36 7.82 -2.39 -0.02 0.34 16 36 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 37 H 0.10 0.22 6.59 -2.39 -0.02 0.21 16 38 H 0.39 -2.40 8.70 -74.06 -0.64 -3.05 16 39 H -0.29 -1.57 7.11 99.48 0.71 -0.87 16 40 H -0.28 -0.87 7.11 99.48 0.71 -0.17 16 41 H 0.16 -0.78 5.12 -2.91 -0.01 -0.79 16 42 H 0.15 -0.59 8.06 -2.91 -0.02 -0.61 16 Total: 0.00 -13.52 348.45 -0.53 -14.05 By element: Atomic # 1 Polarization: -9.18 SS G_CDS: -0.24 Total: -9.42 kcal Atomic # 6 Polarization: 0.83 SS G_CDS: 2.40 Total: 3.22 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -4.66 Total: -8.70 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: 2.05 Total: 0.95 kcal Atomic # 17 Polarization: -0.02 SS G_CDS: -0.08 Total: -0.10 kcal Total: -13.52 -0.53 -14.05 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8270650_16737256.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.125 kcal (2) G-P(sol) polarization free energy of solvation -13.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.527 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.049 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.174 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds