Wall clock time and date at job start Mon Mar 8 2021 08:16:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35994 * 116.99970 * 2 1 4 4 C 1.39120 * 120.06857 * 179.97438 * 3 2 1 5 5 O 1.36019 * 120.07293 * 0.02864 * 4 3 2 6 6 C 1.42903 * 116.99694 * 89.99606 * 5 4 3 7 7 C 1.52997 * 109.46934 * 179.97438 * 6 5 4 8 8 H 1.09003 * 109.47579 * 305.00208 * 7 6 5 9 9 C 1.53004 * 109.47059 * 64.99909 * 7 6 5 10 10 C 1.53001 * 109.47385 * 179.97438 * 9 7 6 11 11 C 1.53002 * 109.46851 * 300.00387 * 10 9 7 12 12 H 1.08997 * 109.46972 * 299.99333 * 11 10 9 13 13 O 1.42901 * 109.47048 * 179.97438 * 11 10 9 14 14 C 1.52995 * 109.47477 * 60.00070 * 11 10 9 15 15 C 1.52999 * 109.47484 * 185.00069 * 7 6 5 16 16 C 1.38636 * 119.85068 * 180.02562 * 4 3 2 17 17 Br 1.89100 * 120.01113 * 180.02562 * 16 4 3 18 18 C 1.38312 * 119.98288 * 0.02562 * 16 4 3 19 19 C 1.50704 * 119.93365 * 180.02562 * 18 16 4 20 20 O 1.42898 * 109.46870 * 285.00131 * 19 18 16 21 21 Si 1.86303 * 109.47212 * 165.00136 * 19 18 16 22 22 C 1.38256 * 120.13874 * 359.97438 * 18 16 4 23 23 C 1.38242 * 120.14614 * 359.76633 * 22 18 16 24 24 H 1.09002 * 109.47382 * 300.00030 * 1 2 3 25 25 H 1.09001 * 109.46938 * 180.02562 * 1 2 3 26 26 H 1.09004 * 109.46926 * 60.00137 * 1 2 3 27 27 H 1.08996 * 109.47545 * 299.99988 * 6 5 4 28 28 H 1.09007 * 109.47310 * 59.99984 * 6 5 4 29 29 H 1.09001 * 109.47385 * 300.00025 * 9 7 6 30 30 H 1.09006 * 109.46509 * 60.00245 * 9 7 6 31 31 H 1.08991 * 109.47366 * 180.02562 * 10 9 7 32 32 H 1.08997 * 109.46788 * 59.99833 * 10 9 7 33 33 H 0.96705 * 113.99905 * 59.99568 * 13 11 10 34 34 H 1.09001 * 109.47420 * 179.97438 * 14 11 10 35 35 H 1.09001 * 109.47450 * 59.99164 * 14 11 10 36 36 H 1.09003 * 109.46826 * 300.00601 * 15 7 6 37 37 H 1.09001 * 109.46678 * 60.00049 * 15 7 6 38 38 H 1.09001 * 109.46968 * 45.00266 * 19 18 16 39 39 H 0.96705 * 113.99911 * 179.97438 * 20 19 18 40 40 H 1.48505 * 109.99700 * 60.00117 * 21 19 18 41 41 H 1.48497 * 109.99897 * 181.31640 * 21 19 18 42 42 H 1.07997 * 119.92720 * 180.02562 * 22 18 16 43 43 H 1.08000 * 119.98985 * 180.27771 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4356 1.2862 0.0005 5 8 4.1793 0.1473 0.0005 6 6 4.5343 -0.3956 -1.2729 7 6 5.3640 -1.6653 -1.0725 8 1 6.2234 -1.4418 -0.4403 9 6 4.5024 -2.7370 -0.4016 10 6 5.3319 -4.0070 -0.2017 11 6 5.8164 -4.5185 -1.5599 12 1 4.9568 -4.7418 -2.1917 13 8 6.5917 -5.7044 -1.3732 14 6 6.6781 -3.4470 -2.2307 15 6 5.8491 -2.1772 -2.4303 16 6 4.0603 2.5238 0.0011 17 35 5.9483 2.6304 0.0011 18 6 3.3023 3.6807 0.0016 19 6 3.9825 5.0255 0.0016 20 8 4.5091 5.2928 1.3028 21 14 2.7486 6.3456 -0.4522 22 6 1.9217 3.6060 0.0011 23 6 1.2930 2.3749 -0.0049 24 1 -0.3634 0.5138 0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 -0.8900 27 1 3.6292 -0.6367 -1.8302 28 1 5.1196 0.3364 -1.8295 29 1 4.1569 -2.3723 0.5658 30 1 3.6430 -2.9605 -1.0338 31 1 4.7180 -4.7705 0.2758 32 1 6.1915 -3.7837 0.4301 33 1 6.1082 -6.4280 -0.9516 34 1 7.0236 -3.8116 -3.1981 35 1 7.5377 -3.2237 -1.5988 36 1 4.9897 -2.4006 -3.0624 37 1 6.4629 -1.4137 -2.9082 38 1 4.7946 5.0219 -0.7254 39 1 4.9623 6.1440 1.3765 40 1 1.6362 6.3608 0.5315 41 1 3.4142 7.6726 -0.4867 42 1 1.3331 4.5115 0.0011 43 1 0.2145 2.3195 -0.0098 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_8767664_16737256.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:16:35 Heat of formation + Delta-G solvation = -128.717135 kcal Electronic energy + Delta-G solvation = -26716.767418 eV Core-core repulsion = 22775.463058 eV Total energy + Delta-G solvation = -3941.304360 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.066 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.74349 -40.22731 -39.27764 -38.82411 -37.25072 -36.53943 -33.16166 -32.33164 -31.77153 -31.21844 -30.15120 -28.58117 -26.37289 -26.24891 -23.80262 -23.43209 -22.42195 -22.11007 -20.80922 -19.38908 -18.58206 -18.27767 -18.15542 -18.08210 -17.05748 -16.55629 -16.36687 -16.27272 -15.72992 -15.56458 -15.42332 -15.34057 -14.96673 -14.53620 -14.23171 -14.00497 -13.92770 -13.77633 -13.55233 -13.16796 -13.13169 -13.04204 -12.70281 -12.55512 -12.42564 -12.21184 -12.05694 -11.81418 -11.62361 -11.58250 -11.54067 -11.14174 -11.10118 -10.81332 -10.63256 -10.45504 -9.73307 -9.28068 -5.04690 -0.18245 0.00348 0.59562 1.18141 1.51062 1.85352 2.09401 2.17166 2.61918 3.22664 3.28207 3.64708 3.68874 3.72691 3.77380 3.84897 3.90622 4.01902 4.05523 4.10737 4.15757 4.19371 4.28693 4.33790 4.36873 4.42607 4.44999 4.49821 4.52339 4.59618 4.70261 4.81557 4.86673 4.91159 5.01783 5.10206 5.11235 5.16611 5.20597 5.22880 5.25024 5.42001 5.50222 6.00471 6.43027 6.52918 6.75600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.300 6.300 3 C 0.124 3.876 4 C 0.093 3.907 5 O -0.310 6.310 6 C 0.071 3.929 7 C -0.085 4.085 8 H 0.084 0.916 9 C -0.107 4.107 10 C -0.152 4.152 11 C 0.103 3.897 12 H 0.054 0.946 13 O -0.570 6.570 14 C -0.111 4.111 15 C -0.109 4.109 16 C -0.053 4.053 17 Br -0.016 7.016 18 C -0.072 4.072 19 C -0.077 4.077 20 O -0.525 6.525 21 Si 0.686 3.314 22 C -0.076 4.076 23 C -0.180 4.180 24 H 0.059 0.941 25 H 0.105 0.895 26 H 0.059 0.941 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.075 0.925 30 H 0.062 0.938 31 H 0.064 0.936 32 H 0.071 0.929 33 H 0.378 0.622 34 H 0.072 0.928 35 H 0.071 0.929 36 H 0.067 0.933 37 H 0.073 0.927 38 H 0.081 0.919 39 H 0.380 0.620 40 H -0.252 1.252 41 H -0.257 1.257 42 H 0.142 0.858 43 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.752 1.167 -3.779 6.182 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.212 6.212 3 C 0.077 3.923 4 C 0.046 3.954 5 O -0.226 6.226 6 C -0.004 4.004 7 C -0.103 4.103 8 H 0.102 0.898 9 C -0.145 4.145 10 C -0.190 4.190 11 C 0.044 3.956 12 H 0.072 0.928 13 O -0.376 6.376 14 C -0.148 4.148 15 C -0.147 4.147 16 C -0.134 4.134 17 Br 0.070 6.930 18 C -0.074 4.074 19 C -0.187 4.187 20 O -0.333 6.333 21 Si 0.587 3.413 22 C -0.094 4.094 23 C -0.199 4.199 24 H 0.078 0.922 25 H 0.123 0.877 26 H 0.078 0.922 27 H 0.074 0.926 28 H 0.075 0.925 29 H 0.094 0.906 30 H 0.081 0.919 31 H 0.083 0.917 32 H 0.090 0.910 33 H 0.225 0.775 34 H 0.090 0.910 35 H 0.090 0.910 36 H 0.086 0.914 37 H 0.091 0.909 38 H 0.099 0.901 39 H 0.228 0.772 40 H -0.177 1.177 41 H -0.182 1.182 42 H 0.159 0.841 43 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -4.081 1.417 -3.548 5.590 hybrid contribution -0.379 0.251 1.005 1.103 sum -4.460 1.668 -2.543 5.398 Atomic orbital electron populations 1.23201 0.77780 1.04658 1.01664 1.86198 1.21653 1.25416 1.87967 1.19268 0.91011 0.85396 0.96666 1.17498 0.86654 0.85919 1.05357 1.86132 1.69714 1.37324 1.29472 1.22858 0.98514 0.94998 0.83986 1.21177 0.98591 0.92929 0.97617 0.89772 1.21470 0.97541 0.93722 1.01755 1.22283 1.00625 0.98166 0.97911 1.21850 0.93241 0.85226 0.95242 0.92801 1.86517 1.42854 1.24279 1.83913 1.21426 0.98525 0.93489 1.01377 1.21462 1.00078 0.97007 0.96150 1.21930 0.92068 0.93756 1.05623 1.96744 1.00422 1.98670 1.97162 1.18966 0.92881 0.92533 1.03025 1.24798 1.04591 1.00497 0.88803 1.86631 1.75903 1.41835 1.28899 0.95079 0.79694 0.77062 0.89465 1.20925 0.93005 0.98082 0.97420 1.21251 1.00792 0.91286 1.06586 0.92249 0.87679 0.92223 0.92567 0.92541 0.90603 0.91896 0.91679 0.91020 0.77469 0.90955 0.90988 0.91410 0.90856 0.90131 0.77202 1.17725 1.18213 0.84094 0.83813 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.30 -0.43 10.28 -34.24 -0.35 -0.78 16 3 C 0.12 0.24 6.70 -39.13 -0.26 -0.02 16 4 C 0.09 0.30 5.73 -39.11 -0.22 0.07 16 5 O -0.31 -1.04 8.71 -34.32 -0.30 -1.34 16 6 C 0.07 0.08 5.44 37.16 0.20 0.28 16 7 C -0.08 -0.03 2.43 -90.62 -0.22 -0.25 16 8 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 9 C -0.11 -0.05 5.10 -26.73 -0.14 -0.19 16 10 C -0.15 -0.03 5.55 -26.73 -0.15 -0.18 16 11 C 0.10 0.06 3.47 -26.73 -0.09 -0.03 16 12 H 0.05 0.00 8.14 -51.93 -0.42 -0.43 16 13 O -0.57 -0.99 13.32 -35.23 -0.47 -1.46 16 14 C -0.11 -0.06 5.57 -26.76 -0.15 -0.21 16 15 C -0.11 0.07 5.20 -26.76 -0.14 -0.07 16 16 C -0.05 -0.16 6.23 -39.41 -0.25 -0.40 16 17 Br -0.02 -0.04 31.42 -68.01 -2.14 -2.18 16 18 C -0.07 -0.12 5.30 -104.59 -0.55 -0.67 16 19 C -0.08 -0.02 2.01 36.01 0.07 0.05 16 20 O -0.53 -0.73 12.67 -35.23 -0.45 -1.18 16 21 Si 0.69 -0.96 30.19 -169.99 -5.13 -6.09 16 22 C -0.08 -0.02 8.65 -39.57 -0.34 -0.36 16 23 C -0.18 0.00 9.04 -39.45 -0.36 -0.35 16 24 H 0.06 -0.18 7.67 -51.93 -0.40 -0.58 16 25 H 0.10 -0.39 8.14 -51.93 -0.42 -0.82 16 26 H 0.06 -0.23 7.65 -51.93 -0.40 -0.62 16 27 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 28 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 29 H 0.08 0.14 7.82 -51.93 -0.41 -0.26 16 30 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 31 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 32 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 33 H 0.38 -0.80 9.08 45.56 0.41 -0.39 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 38 H 0.08 -0.06 7.22 -51.93 -0.37 -0.43 16 39 H 0.38 -0.95 8.74 45.56 0.40 -0.55 16 40 H -0.25 -0.25 6.75 56.52 0.38 0.13 16 41 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 42 H 0.14 -0.22 4.88 -52.49 -0.26 -0.48 16 43 H 0.14 -0.39 6.30 -52.49 -0.33 -0.72 16 LS Contribution 363.73 15.07 5.48 5.48 Total: 0.00 -7.25 363.73 -10.60 -17.85 By element: Atomic # 1 Polarization: -3.26 SS G_CDS: -5.64 Total: -8.90 kcal Atomic # 6 Polarization: 0.21 SS G_CDS: -1.60 Total: -1.40 kcal Atomic # 8 Polarization: -3.20 SS G_CDS: -1.57 Total: -4.76 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.13 Total: -6.09 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.14 Total: -2.18 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -7.25 -10.60 -17.85 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8767664_16737256.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.870 kcal (2) G-P(sol) polarization free energy of solvation -7.247 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.600 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.847 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.717 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds