Wall clock time and date at job start Mon Mar 8 2021 08:37:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35999 * 117.00491 * 2 1 4 4 C 1.39117 * 120.06903 * 179.97438 * 3 2 1 5 5 O 1.36011 * 120.07891 * 0.02562 * 4 3 2 6 6 C 1.42904 * 116.99308 * 89.99858 * 5 4 3 7 7 C 1.53005 * 109.46782 * 179.97438 * 6 5 4 8 8 H 1.09006 * 112.84535 * 43.80699 * 7 6 5 9 9 C 1.53772 * 113.61339 * 174.99933 * 7 6 5 10 10 C 1.53781 * 87.07959 * 89.12171 * 9 7 6 11 11 O 1.42901 * 113.61473 * 270.88341 * 10 9 7 12 12 C 1.42905 * 113.99891 * 294.70209 * 11 10 9 13 13 C 1.53006 * 113.61626 * 140.06611 * 10 9 7 14 14 F 1.39890 * 109.47212 * 54.77929 * 13 10 9 15 15 F 1.39899 * 109.47108 * 174.78392 * 13 10 9 16 16 F 1.39900 * 109.46888 * 294.77669 * 13 10 9 17 17 C 1.53777 * 87.08105 * 25.43389 * 10 9 7 18 18 C 1.38648 * 119.84537 * 180.02562 * 4 3 2 19 19 Br 1.89098 * 120.00605 * 180.02562 * 18 4 3 20 20 C 1.38313 * 119.98286 * 0.02562 * 18 4 3 21 21 C 1.50700 * 119.93247 * 179.97438 * 20 18 4 22 22 O 1.42906 * 109.47050 * 74.99704 * 21 20 18 23 23 Si 1.86291 * 109.47389 * 194.99848 * 21 20 18 24 24 C 1.38251 * 120.13938 * 359.97438 * 20 18 4 25 25 C 1.38238 * 120.15039 * 359.76592 * 24 20 18 26 26 H 1.08997 * 109.47133 * 300.00251 * 1 2 3 27 27 H 1.09004 * 109.46700 * 59.99404 * 1 2 3 28 28 H 1.08995 * 109.47588 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47259 * 299.99904 * 6 5 4 30 30 H 1.08997 * 109.46784 * 60.00735 * 6 5 4 31 31 H 1.09003 * 113.61705 * 203.66385 * 9 7 6 32 32 H 1.08997 * 113.61791 * 334.49220 * 9 7 6 33 33 H 1.09004 * 109.46894 * 56.90205 * 12 11 10 34 34 H 1.09006 * 109.46987 * 176.89689 * 12 11 10 35 35 H 1.08992 * 109.47282 * 296.89765 * 12 11 10 36 36 H 1.09010 * 113.61417 * 220.02406 * 17 10 9 37 37 H 1.08989 * 113.61763 * 89.11906 * 17 10 9 38 38 H 1.09001 * 109.46886 * 315.00251 * 21 20 18 39 39 H 0.96697 * 113.99822 * 179.97438 * 22 21 20 40 40 H 1.48498 * 110.00387 * 300.00346 * 23 21 20 41 41 H 1.48504 * 110.00050 * 61.32248 * 23 21 20 42 42 H 1.08003 * 119.92588 * 180.02562 * 24 20 18 43 43 H 1.08001 * 119.99172 * 180.27395 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4357 1.2861 0.0005 5 8 4.1793 0.1472 0.0005 6 6 4.5344 -0.3956 -1.2728 7 6 5.3641 -1.6653 -1.0724 8 1 4.9595 -2.3176 -0.2984 9 6 5.6962 -2.3974 -2.3833 10 6 6.9578 -1.5215 -2.4610 11 8 6.7541 -0.2839 -3.1459 12 6 6.4455 -0.4314 -4.5334 13 6 8.1972 -2.2738 -2.9496 14 9 7.9203 -2.8796 -4.1797 15 9 9.2588 -1.3752 -3.1008 16 9 8.5461 -3.2545 -2.0148 17 6 6.8722 -1.3999 -0.9305 18 6 4.0604 2.5238 0.0011 19 35 5.9484 2.6302 0.0011 20 6 3.3023 3.6807 0.0016 21 6 3.9825 5.0255 0.0028 22 8 4.5092 5.2940 -1.2983 23 14 2.7488 6.3451 0.4578 24 6 1.9218 3.6060 0.0011 25 6 1.2931 2.3749 -0.0049 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5140 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 3.6293 -0.6367 -1.8302 30 1 5.1197 0.3364 -1.8293 31 1 5.9088 -3.4581 -2.2494 32 1 4.9808 -2.2068 -3.1832 33 1 5.5616 -1.0596 -4.6442 34 1 6.2513 0.5489 -4.9687 35 1 7.2880 -0.8959 -5.0456 36 1 7.1068 -0.4027 -0.5578 37 1 7.4061 -2.1877 -0.3993 38 1 4.7947 5.0211 0.7297 39 1 4.9616 6.1455 -1.3714 40 1 1.6363 6.3612 -0.5257 41 1 2.2174 6.0950 1.8217 42 1 1.3333 4.5116 0.0011 43 1 0.2145 2.3196 -0.0098 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_8767664_17321602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:37:37 Heat of formation + Delta-G solvation = -219.373128 kcal Electronic energy + Delta-G solvation = -35212.780031 eV Core-core repulsion = 29859.182605 eV Total energy + Delta-G solvation = -5353.597426 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.037 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -51.09796 -48.64534 -48.52966 -41.87877 -41.32050 -39.32419 -38.86390 -37.22867 -36.86974 -33.17106 -32.04413 -30.66161 -29.94292 -28.62539 -28.20310 -27.06424 -26.77724 -26.24731 -23.64512 -23.21291 -22.34960 -20.60021 -19.76379 -19.41755 -19.36673 -19.12788 -18.46195 -18.26958 -18.17844 -17.22688 -17.06145 -16.53368 -16.46836 -16.15959 -15.94186 -15.64899 -15.59047 -15.46181 -15.40882 -15.23396 -15.05664 -14.90391 -14.72070 -14.66300 -14.42878 -14.17620 -14.05296 -14.04448 -13.60295 -13.37495 -13.21099 -13.06781 -12.75969 -12.62759 -12.51817 -12.31309 -12.19240 -11.99338 -11.90205 -11.65062 -11.60432 -11.12504 -11.00754 -10.63243 -10.29542 -9.75770 -9.32971 -5.04284 -0.23682 -0.04429 0.58330 1.19967 1.57498 1.63250 1.87682 2.00073 2.09216 2.10482 2.53920 2.64688 2.70487 2.95675 3.28252 3.37070 3.42303 3.53873 3.59857 3.72749 3.79377 3.90339 3.97496 4.03573 4.06808 4.13686 4.18661 4.24349 4.35420 4.36224 4.40293 4.42119 4.46897 4.51141 4.60695 4.68201 4.74522 4.78714 4.83761 4.85715 5.04323 5.06834 5.18796 5.71754 5.94977 6.47175 6.62417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.300 6.300 3 C 0.124 3.876 4 C 0.095 3.905 5 O -0.310 6.310 6 C 0.076 3.924 7 C -0.094 4.094 8 H 0.105 0.895 9 C -0.143 4.143 10 C 0.040 3.960 11 O -0.328 6.328 12 C 0.010 3.990 13 C 0.437 3.563 14 F -0.182 7.182 15 F -0.174 7.174 16 F -0.175 7.175 17 C -0.113 4.113 18 C -0.050 4.050 19 Br -0.007 7.007 20 C -0.073 4.073 21 C -0.073 4.073 22 O -0.536 6.536 23 Si 0.686 3.314 24 C -0.082 4.082 25 C -0.180 4.180 26 H 0.059 0.941 27 H 0.058 0.942 28 H 0.106 0.894 29 H 0.057 0.943 30 H 0.080 0.920 31 H 0.111 0.889 32 H 0.093 0.907 33 H 0.054 0.946 34 H 0.101 0.899 35 H 0.053 0.947 36 H 0.100 0.900 37 H 0.115 0.885 38 H 0.080 0.920 39 H 0.382 0.618 40 H -0.249 1.249 41 H -0.252 1.252 42 H 0.135 0.865 43 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.165 2.731 -0.134 4.983 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.212 6.212 3 C 0.077 3.923 4 C 0.048 3.952 5 O -0.226 6.226 6 C 0.002 3.998 7 C -0.112 4.112 8 H 0.124 0.876 9 C -0.181 4.181 10 C -0.003 4.003 11 O -0.245 6.245 12 C -0.086 4.086 13 C 0.382 3.618 14 F -0.164 7.164 15 F -0.156 7.156 16 F -0.157 7.157 17 C -0.150 4.150 18 C -0.131 4.131 19 Br 0.079 6.921 20 C -0.075 4.075 21 C -0.184 4.184 22 O -0.343 6.343 23 Si 0.587 3.413 24 C -0.100 4.100 25 C -0.199 4.199 26 H 0.078 0.922 27 H 0.077 0.923 28 H 0.125 0.875 29 H 0.076 0.924 30 H 0.098 0.902 31 H 0.130 0.870 32 H 0.111 0.889 33 H 0.072 0.928 34 H 0.120 0.880 35 H 0.071 0.929 36 H 0.118 0.882 37 H 0.133 0.867 38 H 0.098 0.902 39 H 0.230 0.770 40 H -0.174 1.174 41 H -0.177 1.177 42 H 0.152 0.848 43 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -4.342 2.213 0.188 4.877 hybrid contribution -0.361 -0.753 -0.566 1.008 sum -4.703 1.460 -0.378 4.939 Atomic orbital electron populations 1.23206 0.77728 1.04738 1.01640 1.86195 1.21709 1.25338 1.87975 1.19257 0.91036 0.85325 0.96728 1.17464 0.86532 0.85908 1.05337 1.86082 1.69751 1.37439 1.29373 1.22722 0.98163 0.94812 0.84146 1.22020 0.94643 0.96263 0.98260 0.87638 1.23592 0.95492 1.00027 0.98963 1.24045 0.91125 0.87910 0.97223 1.88132 1.89790 1.23961 1.22662 1.23131 1.00450 1.04110 0.80872 1.21209 0.86680 0.78389 0.75519 1.93184 1.93650 1.84571 1.44977 1.93217 1.59540 1.67326 1.95470 1.93176 1.93058 1.64084 1.65333 1.23267 0.96900 1.05830 0.88978 1.21953 0.92566 0.93545 1.05049 1.96766 0.99605 1.98628 1.97069 1.19050 0.92701 0.92879 1.02893 1.24671 1.04856 0.99157 0.89723 1.86516 1.77088 1.42700 1.27962 0.95066 0.79602 0.86662 0.79987 1.20818 0.93216 0.97701 0.98300 1.21221 1.00779 0.91272 1.06641 0.92211 0.92330 0.87528 0.92426 0.90223 0.87042 0.88870 0.92770 0.88031 0.92859 0.88176 0.86672 0.90244 0.76987 1.17369 1.17687 0.84784 0.83876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.30 -0.60 10.28 -34.25 -0.35 -0.96 16 3 C 0.12 0.34 6.70 -39.13 -0.26 0.07 16 4 C 0.09 0.36 5.73 -39.10 -0.22 0.13 16 5 O -0.31 -1.12 9.18 -34.29 -0.31 -1.43 16 6 C 0.08 0.12 5.65 37.16 0.21 0.33 16 7 C -0.09 0.00 4.20 -89.81 -0.38 -0.37 16 8 H 0.11 -0.05 8.14 -51.93 -0.42 -0.47 16 9 C -0.14 0.15 6.51 -25.92 -0.17 -0.02 16 10 C 0.04 0.03 0.85 -89.81 -0.08 -0.05 16 11 O -0.33 -0.52 8.35 -35.23 -0.29 -0.82 16 12 C 0.01 0.00 10.33 101.05 1.04 1.04 16 13 C 0.44 0.88 2.51 37.16 0.09 0.98 16 14 F -0.18 -0.39 15.37 2.25 0.03 -0.36 16 15 F -0.17 -0.65 17.09 2.25 0.04 -0.61 16 16 F -0.18 -0.36 15.83 2.25 0.04 -0.32 16 17 C -0.11 -0.04 6.89 -25.92 -0.18 -0.22 16 18 C -0.05 -0.18 6.23 -39.40 -0.25 -0.42 16 19 Br -0.01 -0.02 31.42 -68.01 -2.14 -2.16 16 20 C -0.07 -0.19 5.30 -104.59 -0.55 -0.75 16 21 C -0.07 -0.02 2.01 36.01 0.07 0.05 16 22 O -0.54 -0.09 12.67 -35.23 -0.45 -0.53 16 23 Si 0.69 -0.96 30.19 -169.99 -5.13 -6.09 16 24 C -0.08 -0.15 8.65 -39.58 -0.34 -0.49 16 25 C -0.18 -0.22 9.04 -39.45 -0.36 -0.57 16 26 H 0.06 -0.16 7.67 -51.93 -0.40 -0.56 16 27 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 28 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 29 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 30 H 0.08 0.19 6.12 -51.93 -0.32 -0.13 16 31 H 0.11 -0.23 8.06 -51.93 -0.42 -0.65 16 32 H 0.09 -0.16 6.65 -51.93 -0.35 -0.51 16 33 H 0.05 -0.09 6.60 -51.93 -0.34 -0.43 16 34 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.05 0.00 6.60 -51.93 -0.34 -0.34 16 36 H 0.10 0.14 8.10 -51.92 -0.42 -0.28 16 37 H 0.12 -0.09 7.01 -51.94 -0.36 -0.45 16 38 H 0.08 -0.03 7.22 -51.93 -0.37 -0.41 16 39 H 0.38 -1.78 8.74 45.56 0.40 -1.38 16 40 H -0.25 -0.23 6.74 56.52 0.38 0.15 16 41 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 42 H 0.13 0.09 4.88 -52.48 -0.26 -0.17 16 43 H 0.14 -0.21 6.30 -52.49 -0.33 -0.54 16 LS Contribution 378.80 15.07 5.71 5.71 Total: 0.00 -7.15 378.80 -8.05 -15.20 By element: Atomic # 1 Polarization: -3.48 SS G_CDS: -4.82 Total: -8.30 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -0.37 Total: 0.66 kcal Atomic # 8 Polarization: -2.33 SS G_CDS: -1.41 Total: -3.74 kcal Atomic # 9 Polarization: -1.40 SS G_CDS: 0.11 Total: -1.29 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.13 Total: -6.09 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.14 Total: -2.16 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -7.15 -8.05 -15.20 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8767664_17321602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -204.170 kcal (2) G-P(sol) polarization free energy of solvation -7.151 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -211.321 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.052 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.203 kcal (6) G-S(sol) free energy of system = (1) + (5) -219.373 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds