Wall clock time and date at job start Mon Mar 8 2021 08:37:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35999 * 117.00491 * 2 1 4 4 C 1.39117 * 120.06903 * 179.97438 * 3 2 1 5 5 O 1.36011 * 120.07891 * 0.02562 * 4 3 2 6 6 C 1.42904 * 116.99308 * 89.99858 * 5 4 3 7 7 C 1.53005 * 109.46782 * 179.97438 * 6 5 4 8 8 H 1.09006 * 112.84535 * 43.80699 * 7 6 5 9 9 C 1.53772 * 113.61339 * 174.99933 * 7 6 5 10 10 C 1.53781 * 87.07959 * 89.12171 * 9 7 6 11 11 O 1.42901 * 113.61473 * 270.88341 * 10 9 7 12 12 C 1.42905 * 113.99891 * 294.70209 * 11 10 9 13 13 C 1.53006 * 113.61626 * 140.06611 * 10 9 7 14 14 F 1.39890 * 109.47212 * 54.77929 * 13 10 9 15 15 F 1.39899 * 109.47108 * 174.78392 * 13 10 9 16 16 F 1.39900 * 109.46888 * 294.77669 * 13 10 9 17 17 C 1.53777 * 87.08105 * 25.43389 * 10 9 7 18 18 C 1.38648 * 119.84537 * 180.02562 * 4 3 2 19 19 Br 1.89098 * 120.00605 * 180.02562 * 18 4 3 20 20 C 1.38313 * 119.98286 * 0.02562 * 18 4 3 21 21 C 1.50700 * 119.93247 * 179.97438 * 20 18 4 22 22 O 1.42906 * 109.47050 * 74.99704 * 21 20 18 23 23 Si 1.86291 * 109.47389 * 194.99848 * 21 20 18 24 24 C 1.38251 * 120.13938 * 359.97438 * 20 18 4 25 25 C 1.38238 * 120.15039 * 359.76592 * 24 20 18 26 26 H 1.08997 * 109.47133 * 300.00251 * 1 2 3 27 27 H 1.09004 * 109.46700 * 59.99404 * 1 2 3 28 28 H 1.08995 * 109.47588 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47259 * 299.99904 * 6 5 4 30 30 H 1.08997 * 109.46784 * 60.00735 * 6 5 4 31 31 H 1.09003 * 113.61705 * 203.66385 * 9 7 6 32 32 H 1.08997 * 113.61791 * 334.49220 * 9 7 6 33 33 H 1.09004 * 109.46894 * 56.90205 * 12 11 10 34 34 H 1.09006 * 109.46987 * 176.89689 * 12 11 10 35 35 H 1.08992 * 109.47282 * 296.89765 * 12 11 10 36 36 H 1.09010 * 113.61417 * 220.02406 * 17 10 9 37 37 H 1.08989 * 113.61763 * 89.11906 * 17 10 9 38 38 H 1.09001 * 109.46886 * 315.00251 * 21 20 18 39 39 H 0.96697 * 113.99822 * 179.97438 * 22 21 20 40 40 H 1.48498 * 110.00387 * 300.00346 * 23 21 20 41 41 H 1.48504 * 110.00050 * 61.32248 * 23 21 20 42 42 H 1.08003 * 119.92588 * 180.02562 * 24 20 18 43 43 H 1.08001 * 119.99172 * 180.27395 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4357 1.2861 0.0005 5 8 4.1793 0.1472 0.0005 6 6 4.5344 -0.3956 -1.2728 7 6 5.3641 -1.6653 -1.0724 8 1 4.9595 -2.3176 -0.2984 9 6 5.6962 -2.3974 -2.3833 10 6 6.9578 -1.5215 -2.4610 11 8 6.7541 -0.2839 -3.1459 12 6 6.4455 -0.4314 -4.5334 13 6 8.1972 -2.2738 -2.9496 14 9 7.9203 -2.8796 -4.1797 15 9 9.2588 -1.3752 -3.1008 16 9 8.5461 -3.2545 -2.0148 17 6 6.8722 -1.3999 -0.9305 18 6 4.0604 2.5238 0.0011 19 35 5.9484 2.6302 0.0011 20 6 3.3023 3.6807 0.0016 21 6 3.9825 5.0255 0.0028 22 8 4.5092 5.2940 -1.2983 23 14 2.7488 6.3451 0.4578 24 6 1.9218 3.6060 0.0011 25 6 1.2931 2.3749 -0.0049 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5140 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 3.6293 -0.6367 -1.8302 30 1 5.1197 0.3364 -1.8293 31 1 5.9088 -3.4581 -2.2494 32 1 4.9808 -2.2068 -3.1832 33 1 5.5616 -1.0596 -4.6442 34 1 6.2513 0.5489 -4.9687 35 1 7.2880 -0.8959 -5.0456 36 1 7.1068 -0.4027 -0.5578 37 1 7.4061 -2.1877 -0.3993 38 1 4.7947 5.0211 0.7297 39 1 4.9616 6.1455 -1.3714 40 1 1.6363 6.3612 -0.5257 41 1 2.2174 6.0950 1.8217 42 1 1.3333 4.5116 0.0011 43 1 0.2145 2.3196 -0.0098 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_8767664_17321602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:37:36 Heat of formation + Delta-G solvation = -215.570558 kcal Electronic energy + Delta-G solvation = -35212.615139 eV Core-core repulsion = 29859.182605 eV Total energy + Delta-G solvation = -5353.432534 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.037 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -51.27309 -48.80417 -48.74250 -41.96273 -41.35522 -39.37840 -38.95813 -37.23936 -36.90265 -33.30285 -32.12110 -30.77105 -30.02995 -28.55096 -28.19039 -27.17853 -26.76491 -26.26814 -23.75267 -23.30129 -22.42984 -20.65674 -19.86688 -19.56888 -19.46687 -19.23160 -18.49065 -18.32960 -18.26221 -17.24929 -17.09865 -16.56614 -16.49573 -16.21744 -16.00576 -15.68664 -15.66869 -15.63357 -15.52649 -15.25231 -15.20004 -15.04775 -14.91321 -14.81161 -14.48322 -14.20888 -14.10748 -14.06147 -13.66570 -13.36533 -13.21098 -13.05527 -12.73038 -12.60992 -12.52810 -12.33291 -12.21478 -12.02460 -11.93697 -11.72693 -11.64562 -11.26901 -11.13636 -10.71468 -10.26007 -9.91503 -9.43452 -4.94042 -0.37482 -0.16562 0.41525 1.26430 1.51241 1.65317 1.91038 1.92583 2.08506 2.10252 2.43758 2.55371 2.61877 2.88762 3.28889 3.30145 3.35830 3.47283 3.55982 3.68081 3.76680 3.88947 3.98520 4.06191 4.21663 4.23636 4.26218 4.29069 4.30617 4.36588 4.38376 4.47130 4.51924 4.62357 4.64126 4.67865 4.71736 4.73781 4.78717 4.82922 4.93894 5.03948 5.13195 5.71678 5.91491 6.35215 6.91017 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.317 6.317 3 C 0.115 3.885 4 C 0.076 3.924 5 O -0.322 6.322 6 C 0.078 3.922 7 C -0.090 4.090 8 H 0.112 0.888 9 C -0.132 4.132 10 C 0.038 3.962 11 O -0.344 6.344 12 C 0.005 3.995 13 C 0.434 3.566 14 F -0.183 7.183 15 F -0.188 7.188 16 F -0.176 7.176 17 C -0.114 4.114 18 C -0.067 4.067 19 Br -0.012 7.012 20 C -0.088 4.088 21 C -0.087 4.087 22 O -0.553 6.553 23 Si 0.780 3.220 24 C -0.092 4.092 25 C -0.175 4.175 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.121 0.879 29 H 0.058 0.942 30 H 0.070 0.930 31 H 0.126 0.874 32 H 0.103 0.897 33 H 0.068 0.932 34 H 0.109 0.891 35 H 0.047 0.953 36 H 0.086 0.914 37 H 0.126 0.874 38 H 0.083 0.917 39 H 0.402 0.598 40 H -0.277 1.277 41 H -0.286 1.286 42 H 0.145 0.855 43 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.259 2.786 -0.287 5.959 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.230 6.230 3 C 0.067 3.933 4 C 0.029 3.971 5 O -0.239 6.239 6 C 0.004 3.996 7 C -0.108 4.108 8 H 0.130 0.870 9 C -0.170 4.170 10 C -0.005 4.005 11 O -0.261 6.261 12 C -0.090 4.090 13 C 0.380 3.620 14 F -0.165 7.165 15 F -0.169 7.169 16 F -0.157 7.157 17 C -0.151 4.151 18 C -0.148 4.148 19 Br 0.075 6.925 20 C -0.091 4.091 21 C -0.196 4.196 22 O -0.363 6.363 23 Si 0.684 3.316 24 C -0.111 4.111 25 C -0.194 4.194 26 H 0.087 0.913 27 H 0.089 0.911 28 H 0.139 0.861 29 H 0.077 0.923 30 H 0.088 0.912 31 H 0.144 0.856 32 H 0.121 0.879 33 H 0.087 0.913 34 H 0.127 0.873 35 H 0.066 0.934 36 H 0.105 0.895 37 H 0.144 0.856 38 H 0.101 0.899 39 H 0.253 0.747 40 H -0.204 1.204 41 H -0.213 1.213 42 H 0.162 0.838 43 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -5.407 2.273 0.021 5.865 hybrid contribution -0.045 -0.793 -0.531 0.956 sum -5.452 1.480 -0.510 5.672 Atomic orbital electron populations 1.23485 0.75851 1.06132 1.02684 1.86172 1.23713 1.25163 1.87927 1.19352 0.90893 0.86080 0.96935 1.17727 0.87282 0.86015 1.06048 1.86052 1.69932 1.37585 1.30316 1.22746 0.98194 0.95116 0.83566 1.21978 0.93998 0.95737 0.99106 0.86988 1.23618 0.94437 1.00348 0.98558 1.24143 0.91198 0.87999 0.97139 1.88119 1.89868 1.24616 1.23541 1.23255 1.00795 1.04913 0.80038 1.21465 0.86770 0.78314 0.75488 1.93177 1.93607 1.84586 1.45105 1.93186 1.60329 1.67829 1.95556 1.93170 1.93116 1.64101 1.65311 1.23318 0.97409 1.05447 0.88968 1.22098 0.92566 0.94018 1.06075 1.96729 0.99994 1.98647 1.97161 1.19449 0.93294 0.93738 1.02569 1.24947 1.05804 0.98953 0.89926 1.86467 1.77501 1.44457 1.27841 0.93989 0.76801 0.84562 0.76276 1.21043 0.93152 0.98458 0.98401 1.21517 1.02066 0.90534 1.05240 0.91250 0.91125 0.86078 0.92347 0.91209 0.85603 0.87873 0.91344 0.87274 0.93424 0.89548 0.85627 0.89915 0.74717 1.20443 1.21256 0.83825 0.81258 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.32 -1.31 10.28 -79.67 -0.82 -2.13 16 3 C 0.11 0.68 6.70 22.56 0.15 0.83 16 4 C 0.08 0.67 5.73 22.58 0.13 0.80 16 5 O -0.32 -2.74 9.18 -79.79 -0.73 -3.47 16 6 C 0.08 0.33 5.65 71.98 0.41 0.73 16 7 C -0.09 -0.02 4.20 -10.27 -0.04 -0.06 16 8 H 0.11 -0.11 8.14 -2.38 -0.02 -0.13 16 9 C -0.13 0.33 6.51 31.12 0.20 0.53 16 10 C 0.04 0.07 0.85 -10.27 -0.01 0.06 16 11 O -0.34 -1.37 8.35 -148.98 -1.24 -2.62 16 12 C 0.01 0.00 10.33 113.37 1.17 1.17 16 13 C 0.43 1.95 2.51 71.98 0.18 2.13 16 14 F -0.18 -0.82 15.37 44.97 0.69 -0.12 16 15 F -0.19 -1.59 17.09 44.97 0.77 -0.82 16 16 F -0.18 -0.74 15.83 44.97 0.71 -0.03 16 17 C -0.11 -0.16 6.89 31.12 0.21 0.05 16 18 C -0.07 -0.56 6.23 22.39 0.14 -0.42 16 19 Br -0.01 -0.08 31.42 -20.37 -0.64 -0.72 16 20 C -0.09 -0.53 5.30 -19.84 -0.11 -0.64 16 21 C -0.09 -0.08 2.01 71.24 0.14 0.07 16 22 O -0.55 -0.27 12.67 -148.98 -1.89 -2.16 16 23 Si 0.78 -2.39 30.19 68.60 2.07 -0.32 16 24 C -0.09 -0.36 8.65 22.27 0.19 -0.17 16 25 C -0.17 -0.40 9.04 22.35 0.20 -0.20 16 26 H 0.07 -0.45 7.67 -2.39 -0.02 -0.47 16 27 H 0.07 -0.50 7.65 -2.38 -0.02 -0.52 16 28 H 0.12 -0.95 8.14 -2.39 -0.02 -0.97 16 29 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 30 H 0.07 0.43 6.12 -2.39 -0.01 0.42 16 31 H 0.13 -0.65 8.06 -2.39 -0.02 -0.67 16 32 H 0.10 -0.45 6.65 -2.39 -0.02 -0.46 16 33 H 0.07 -0.24 6.60 -2.39 -0.02 -0.25 16 34 H 0.11 -0.25 8.14 -2.38 -0.02 -0.27 16 35 H 0.05 0.04 6.60 -2.39 -0.02 0.02 16 36 H 0.09 0.38 8.10 -2.38 -0.02 0.36 16 37 H 0.13 -0.14 7.01 -2.39 -0.02 -0.16 16 38 H 0.08 -0.03 7.22 -2.39 -0.02 -0.05 16 39 H 0.40 -3.86 8.74 -74.06 -0.65 -4.51 16 40 H -0.28 -0.44 6.74 99.48 0.67 0.23 16 41 H -0.29 -0.67 7.11 99.48 0.71 0.03 16 42 H 0.14 0.18 4.88 -2.91 -0.01 0.16 16 43 H 0.17 -0.70 6.30 -2.91 -0.02 -0.72 16 Total: 0.00 -17.69 378.80 3.46 -14.23 By element: Atomic # 1 Polarization: -8.22 SS G_CDS: 0.45 Total: -7.77 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: 4.09 Total: 5.94 kcal Atomic # 8 Polarization: -5.69 SS G_CDS: -4.68 Total: -10.38 kcal Atomic # 9 Polarization: -3.14 SS G_CDS: 2.17 Total: -0.97 kcal Atomic # 14 Polarization: -2.39 SS G_CDS: 2.07 Total: -0.32 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -0.64 Total: -0.72 kcal Total: -17.69 3.46 -14.23 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8767664_17321602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -201.343 kcal (2) G-P(sol) polarization free energy of solvation -17.685 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -219.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.458 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.227 kcal (6) G-S(sol) free energy of system = (1) + (5) -215.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds