Wall clock time and date at job start Mon Mar 8 2021 10:46:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.46676 * 2 1 4 4 C 1.50697 * 109.47418 * 120.00120 * 2 1 3 5 5 C 1.38248 * 119.94300 * 245.00143 * 4 2 1 6 6 C 1.38166 * 120.05366 * 179.97438 * 5 4 2 7 7 C 1.38708 * 119.94469 * 0.02562 * 6 5 4 8 8 O 1.35901 * 120.05549 * 180.02562 * 7 6 5 9 9 C 1.42902 * 116.99789 * 359.97438 * 8 7 6 10 10 C 1.53004 * 109.46851 * 179.97438 * 9 8 7 11 11 H 1.08999 * 112.85035 * 43.79606 * 10 9 8 12 12 C 1.53781 * 113.61083 * 174.99693 * 10 9 8 13 13 C 1.53784 * 87.07955 * 139.97932 * 12 10 9 14 14 H 1.08999 * 113.61672 * 89.19803 * 13 12 10 15 15 O 1.42901 * 113.61953 * 220.01844 * 13 12 10 16 16 C 1.53779 * 113.61265 * 272.49276 * 10 9 8 17 17 C 1.38753 * 119.88886 * 359.97438 * 7 6 5 18 18 C 1.50699 * 120.02544 * 180.02562 * 17 7 6 19 19 O 1.42903 * 109.47152 * 180.02562 * 18 17 7 20 20 C 1.38121 * 119.94424 * 0.27818 * 17 7 6 21 21 H 0.96697 * 114.00149 * 60.00434 * 1 2 3 22 22 H 1.09004 * 109.46974 * 240.00594 * 2 1 3 23 23 H 1.48496 * 110.00051 * 298.68083 * 3 2 1 24 24 H 1.48499 * 110.00019 * 60.00193 * 3 2 1 25 25 H 1.07994 * 119.97286 * 359.97438 * 5 4 2 26 26 H 1.08001 * 120.02571 * 180.02562 * 6 5 4 27 27 H 1.08999 * 109.47164 * 299.99446 * 9 8 7 28 28 H 1.08994 * 109.47321 * 59.99538 * 9 8 7 29 29 H 1.08993 * 113.61390 * 254.52316 * 12 10 9 30 30 H 1.08996 * 113.61731 * 25.35199 * 12 10 9 31 31 H 0.96696 * 114.00490 * 179.97438 * 15 13 12 32 32 H 1.09003 * 113.61702 * 334.57265 * 16 10 9 33 33 H 1.09003 * 113.61269 * 105.47393 * 16 10 9 34 34 H 1.08997 * 109.47198 * 59.99999 * 18 17 7 35 35 H 1.09008 * 109.47393 * 299.99716 * 18 17 7 36 36 H 0.96700 * 114.00311 * 180.02562 * 19 18 17 37 37 H 1.08004 * 119.97302 * 179.72672 * 20 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6388 -0.0111 2.1905 6 6 3.1000 -0.6600 3.3198 7 6 2.8533 -2.0144 3.4894 8 8 3.3054 -2.6548 4.5995 9 6 4.0286 -1.8714 5.5510 10 6 4.4528 -2.7576 6.7239 11 1 4.8464 -3.7226 6.4047 12 6 5.3445 -2.0373 7.7491 13 6 4.5537 -2.7784 8.8401 14 1 4.9749 -3.7491 9.1016 15 8 4.2641 -1.9729 9.9844 16 6 3.3935 -2.8590 7.8340 17 6 2.1431 -2.7140 2.5243 18 6 1.8728 -4.1854 2.7057 19 8 1.1311 -4.6750 1.5866 20 6 1.6887 -2.0618 1.3947 21 1 -0.3933 0.4416 -0.7650 22 1 1.7924 -0.5138 -0.8901 23 1 1.5878 2.4586 -1.2242 24 1 1.5614 2.4679 1.2085 25 1 2.8310 1.0433 2.0578 26 1 3.6522 -0.1131 4.0697 27 1 4.9138 -1.4486 5.0759 28 1 3.3925 -1.0654 5.9165 29 1 6.3935 -2.3285 7.6963 30 1 5.2055 -0.9563 7.7655 31 1 3.7666 -2.4334 10.6739 32 1 2.7201 -2.0028 7.8745 33 1 2.8675 -3.8136 7.8497 34 1 1.2976 -4.3393 3.6186 35 1 2.8186 -4.7225 2.7772 36 1 0.9206 -5.6175 1.6361 37 1 1.1397 -2.6069 0.6411 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_8845214_11354860.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:46:17 Heat of formation + Delta-G solvation = -116.123223 kcal Electronic energy + Delta-G solvation = -20226.228121 eV Core-core repulsion = 16936.363115 eV Total energy + Delta-G solvation = -3289.865006 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.124 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.55485 -40.35108 -38.96134 -37.98300 -37.15667 -36.00929 -33.01256 -31.83641 -29.42788 -27.32830 -26.75145 -26.17566 -24.16736 -22.44612 -21.74452 -20.56936 -19.20629 -18.68124 -18.52392 -18.31768 -17.07577 -17.00724 -16.71346 -16.33686 -15.80503 -15.77253 -15.55177 -15.19566 -15.01441 -14.62018 -14.16130 -14.04048 -13.70271 -13.46744 -13.38162 -12.90961 -12.64103 -12.61806 -12.37593 -12.20480 -11.89565 -11.71463 -11.65087 -11.31025 -11.19606 -10.74578 -10.48612 -9.87035 -9.16403 -4.94977 0.18607 0.27992 1.28637 1.58116 1.92066 2.05339 2.52457 3.18451 3.30031 3.41298 3.46258 3.56815 3.71017 3.80159 3.83859 3.94720 3.96104 4.13561 4.25021 4.27318 4.32484 4.34552 4.42856 4.47427 4.51033 4.68187 4.74982 4.76098 4.80226 4.93884 4.98682 5.12303 5.19150 5.24334 5.38348 5.44773 5.70860 6.31569 6.58807 6.84311 6.86247 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.086 4.086 3 Si 0.770 3.230 4 C -0.126 4.126 5 C -0.081 4.081 6 C -0.204 4.204 7 C 0.132 3.868 8 O -0.318 6.318 9 C 0.065 3.935 10 C -0.103 4.103 11 H 0.111 0.889 12 C -0.120 4.120 13 C 0.073 3.927 14 H 0.099 0.901 15 O -0.582 6.582 16 C -0.165 4.165 17 C -0.143 4.143 18 C 0.132 3.868 19 O -0.588 6.588 20 C -0.047 4.047 21 H 0.393 0.607 22 H 0.089 0.911 23 H -0.284 1.284 24 H -0.296 1.296 25 H 0.146 0.854 26 H 0.156 0.844 27 H 0.081 0.919 28 H 0.067 0.933 29 H 0.090 0.910 30 H 0.087 0.913 31 H 0.395 0.605 32 H 0.080 0.920 33 H 0.075 0.925 34 H 0.062 0.938 35 H 0.069 0.931 36 H 0.402 0.598 37 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.898 -1.771 0.901 4.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.194 4.194 3 Si 0.675 3.325 4 C -0.126 4.126 5 C -0.098 4.098 6 C -0.222 4.222 7 C 0.087 3.913 8 O -0.232 6.232 9 C -0.009 4.009 10 C -0.121 4.121 11 H 0.129 0.871 12 C -0.158 4.158 13 C 0.014 3.986 14 H 0.117 0.883 15 O -0.391 6.391 16 C -0.202 4.202 17 C -0.143 4.143 18 C 0.054 3.946 19 O -0.397 6.397 20 C -0.066 4.066 21 H 0.244 0.756 22 H 0.107 0.893 23 H -0.211 1.211 24 H -0.224 1.224 25 H 0.163 0.837 26 H 0.173 0.827 27 H 0.099 0.901 28 H 0.086 0.914 29 H 0.109 0.891 30 H 0.106 0.894 31 H 0.245 0.755 32 H 0.098 0.902 33 H 0.094 0.906 34 H 0.080 0.920 35 H 0.087 0.913 36 H 0.253 0.747 37 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 4.142 -0.415 0.987 4.278 hybrid contribution -1.702 -0.956 -0.002 1.952 sum 2.440 -1.371 0.985 2.967 Atomic orbital electron populations 1.86564 1.18835 1.80728 1.50903 1.25052 0.83873 1.12196 0.98252 0.94144 0.90204 0.71683 0.76506 1.19419 1.01894 0.94090 0.97217 1.21024 0.96249 1.00018 0.92557 1.21375 1.06609 0.93314 1.00945 1.18767 0.94441 0.91334 0.86800 1.86030 1.69259 1.38973 1.28959 1.23018 0.95757 0.93987 0.88174 1.22290 0.97806 1.00391 0.91613 0.87108 1.23073 0.99454 1.00822 0.92414 1.23428 0.95962 0.94829 0.84376 0.88319 1.86478 1.78397 1.43159 1.31041 1.23753 0.97427 1.02945 0.96104 1.19326 1.03226 0.96593 0.95186 1.20608 0.95642 0.89849 0.88467 1.86381 1.76698 1.31777 1.44826 1.20689 0.96033 0.93506 0.96323 0.75637 0.89327 1.21129 1.22363 0.83651 0.82693 0.90100 0.91448 0.89120 0.89410 0.75542 0.90167 0.90612 0.92014 0.91279 0.74741 0.85298 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.30 12.81 -148.98 -1.91 -5.21 16 2 C -0.09 -0.25 2.79 71.23 0.20 -0.05 16 3 Si 0.77 -0.27 29.85 68.60 2.05 1.78 16 4 C -0.13 -0.80 5.38 -19.85 -0.11 -0.91 16 5 C -0.08 -0.29 8.66 22.26 0.19 -0.10 16 6 C -0.20 -0.61 9.04 22.37 0.20 -0.41 16 7 C 0.13 0.73 6.66 22.51 0.15 0.88 16 8 O -0.32 -1.06 9.56 -92.44 -0.88 -1.94 16 9 C 0.07 -0.11 4.58 71.98 0.33 0.22 16 10 C -0.10 0.33 4.01 -10.27 -0.04 0.28 16 11 H 0.11 -0.45 8.14 -2.39 -0.02 -0.46 16 12 C -0.12 0.38 7.47 31.12 0.23 0.61 16 13 C 0.07 -0.18 5.21 31.12 0.16 -0.02 16 14 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 15 O -0.58 -0.40 13.67 -148.98 -2.04 -2.44 16 16 C -0.16 0.33 7.46 31.12 0.23 0.56 16 17 C -0.14 -1.07 5.89 -19.77 -0.12 -1.19 16 18 C 0.13 0.51 6.91 71.24 0.49 1.00 16 19 O -0.59 -2.25 12.14 -148.98 -1.81 -4.06 16 20 C -0.05 -0.42 9.01 22.25 0.20 -0.22 16 21 H 0.39 -1.07 8.74 -74.06 -0.65 -1.71 16 22 H 0.09 -0.04 7.96 -2.39 -0.02 -0.06 16 23 H -0.28 -0.95 7.11 99.48 0.71 -0.24 16 24 H -0.30 -1.85 7.05 99.48 0.70 -1.15 16 25 H 0.15 -0.10 4.86 -2.91 -0.01 -0.11 16 26 H 0.16 -0.34 6.30 -2.91 -0.02 -0.36 16 27 H 0.08 -0.34 7.66 -2.39 -0.02 -0.36 16 28 H 0.07 -0.12 7.36 -2.39 -0.02 -0.14 16 29 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 30 H 0.09 -0.16 8.10 -2.39 -0.02 -0.18 16 31 H 0.39 -2.79 9.12 -74.06 -0.68 -3.47 16 32 H 0.08 0.02 7.90 -2.39 -0.02 0.00 16 33 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 34 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 35 H 0.07 0.11 8.14 -2.38 -0.02 0.09 16 36 H 0.40 -2.29 9.12 -74.06 -0.68 -2.97 16 37 H 0.13 1.33 7.00 -2.91 -0.02 1.31 16 Total: 0.00 -18.81 308.25 -3.32 -22.13 By element: Atomic # 1 Polarization: -10.08 SS G_CDS: -0.85 Total: -10.93 kcal Atomic # 6 Polarization: -1.45 SS G_CDS: 2.13 Total: 0.68 kcal Atomic # 8 Polarization: -7.01 SS G_CDS: -6.64 Total: -13.65 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: 2.05 Total: 1.78 kcal Total: -18.81 -3.32 -22.13 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8845214_11354860.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.995 kcal (2) G-P(sol) polarization free energy of solvation -18.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.808 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.128 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.123 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds