Wall clock time and date at job start Mon Mar 8 2021 13:45:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42903 * 113.99999 * 2 1 4 4 C 1.52999 * 112.90830 * 66.16367 * 3 2 1 5 5 F 1.39892 * 109.47284 * 283.36937 * 4 3 2 6 6 F 1.39902 * 109.46837 * 43.37079 * 4 3 2 7 7 F 1.39897 * 109.47103 * 163.37008 * 4 3 2 8 8 C 1.53784 * 113.61112 * 294.91330 * 3 2 1 9 9 C 1.53785 * 87.07948 * 270.88374 * 8 3 2 10 10 H 1.08996 * 113.61349 * 219.93790 * 9 8 3 11 11 C 1.53002 * 113.60963 * 89.12034 * 9 8 3 12 12 O 1.42900 * 109.46787 * 174.99909 * 11 9 8 13 13 C 1.35897 * 117.00002 * 179.97438 * 12 11 9 14 14 C 1.38718 * 120.05628 * 179.97438 * 13 12 11 15 15 C 1.50705 * 120.02614 * 0.02562 * 14 13 12 16 16 O 1.42902 * 109.47113 * 180.02562 * 15 14 13 17 17 C 1.38161 * 119.94593 * 179.77459 * 14 13 12 18 18 C 1.38244 * 120.05079 * 0.51877 * 17 14 13 19 19 C 1.50704 * 119.94059 * 179.73097 * 18 17 14 20 20 O 1.42901 * 109.47348 * 299.72429 * 19 18 17 21 21 Si 1.86306 * 109.47027 * 179.72845 * 19 18 17 22 22 C 1.38282 * 120.11551 * 359.45265 * 18 17 14 23 23 C 1.38129 * 120.05352 * 0.30100 * 22 18 17 24 24 C 1.53781 * 87.08305 * 334.56813 * 9 8 3 25 25 H 1.09004 * 109.47590 * 182.57378 * 1 2 3 26 26 H 1.09007 * 109.47486 * 302.57262 * 1 2 3 27 27 H 1.08996 * 109.47421 * 62.57206 * 1 2 3 28 28 H 1.09001 * 113.61198 * 156.33507 * 8 3 2 29 29 H 1.08998 * 113.61286 * 25.43268 * 8 3 2 30 30 H 1.08995 * 109.47399 * 55.00132 * 11 9 8 31 31 H 1.08999 * 109.46702 * 294.99429 * 11 9 8 32 32 H 1.09000 * 109.47005 * 300.00328 * 15 14 13 33 33 H 1.08997 * 109.47307 * 59.99951 * 15 14 13 34 34 H 0.96691 * 113.99852 * 180.02562 * 16 15 14 35 35 H 1.07996 * 119.97803 * 180.24855 * 17 14 13 36 36 H 1.08996 * 109.47154 * 59.73054 * 19 18 17 37 37 H 0.96703 * 113.99975 * 300.00389 * 20 19 18 38 38 H 1.48498 * 110.00337 * 58.67696 * 21 19 18 39 39 H 1.48500 * 110.00107 * 180.02562 * 21 19 18 40 40 H 1.08007 * 119.97574 * 180.27194 * 22 18 17 41 41 H 1.07998 * 120.02379 * 179.97438 * 23 22 18 42 42 H 1.08997 * 113.61501 * 139.97655 * 24 9 8 43 43 H 1.08992 * 113.61506 * 270.88451 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7322 2.0812 1.2891 5 9 0.4171 2.5579 1.2721 6 9 1.9073 1.2351 2.3894 7 9 2.6179 3.1598 1.3846 8 6 1.7185 2.1096 -1.2780 9 6 2.9932 1.4839 -1.8684 10 1 3.5880 2.1803 -2.4594 11 6 2.7480 0.1547 -2.5853 12 8 3.9616 -0.2876 -3.1966 13 6 3.9164 -1.4621 -3.8787 14 6 5.0578 -1.9507 -4.4973 15 6 6.3500 -1.1797 -4.4130 16 8 7.3711 -1.8822 -5.1242 17 6 5.0104 -3.1473 -5.1863 18 6 3.8240 -3.8522 -5.2686 19 6 3.7737 -5.1542 -6.0259 20 8 4.1300 -4.9255 -7.3908 21 14 2.0491 -5.8543 -5.9433 22 6 2.6849 -3.3676 -4.6524 23 6 2.7283 -2.1743 -3.9581 24 6 3.4890 1.3214 -0.4218 25 1 -0.3634 -1.0266 0.0461 26 1 -0.3634 0.5533 0.8661 27 1 -0.3634 0.4733 -0.9121 28 1 1.7854 3.1887 -1.1396 29 1 0.8052 1.8030 -1.7878 30 1 1.9841 0.2903 -3.3508 31 1 2.4118 -0.5903 -1.8642 32 1 6.2135 -0.1926 -4.8545 33 1 6.6420 -1.0732 -3.3683 34 1 8.2324 -1.4429 -5.1118 35 1 5.8997 -3.5302 -5.6646 36 1 4.4743 -5.8607 -5.5809 37 1 3.5478 -4.3052 -7.8506 38 1 1.0801 -4.8869 -6.5180 39 1 1.9863 -7.1388 -6.6859 40 1 1.7602 -3.9224 -4.7145 41 1 1.8383 -1.7961 -3.4774 42 1 4.0049 0.3785 -0.2404 43 1 4.0399 2.1849 -0.0494 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_8845214_17321602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:45:23 Heat of formation + Delta-G solvation = -248.372440 kcal Electronic energy + Delta-G solvation = -32084.977501 eV Core-core repulsion = 27069.940574 eV Total energy + Delta-G solvation = -5015.036927 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.127 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -51.22009 -48.76848 -48.64741 -41.90299 -41.11447 -39.13392 -37.95907 -37.31382 -36.85494 -32.95668 -31.72408 -30.56301 -28.40563 -27.59933 -27.19067 -26.97737 -26.06276 -23.86000 -22.71090 -21.81419 -20.67665 -19.90655 -19.52094 -19.28347 -19.15924 -18.49958 -18.00621 -17.44398 -17.06187 -16.79576 -16.60466 -16.41203 -16.15001 -15.84130 -15.75592 -15.60380 -15.54002 -15.49985 -15.18685 -15.09965 -14.90911 -14.84789 -14.80723 -14.54012 -14.36657 -14.03813 -13.78935 -13.51836 -13.42472 -13.16099 -12.85549 -12.74496 -12.48654 -12.31301 -12.13956 -11.93562 -11.86286 -11.79788 -11.53884 -11.26245 -10.93877 -10.51869 -9.78027 -9.10506 -4.93863 0.27015 0.37640 1.33017 1.49844 1.61417 1.89693 1.96566 1.99205 2.47763 2.56805 2.64621 2.79190 3.15593 3.15935 3.29491 3.40280 3.43806 3.54957 3.75778 3.81634 3.97254 4.01349 4.06118 4.08413 4.16546 4.18895 4.27709 4.30555 4.38153 4.40479 4.45851 4.49974 4.54217 4.58668 4.63000 4.64576 4.78720 4.86260 5.01321 5.25735 5.31328 5.52351 5.54052 5.80148 6.32259 6.47767 6.67841 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.332 6.332 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.182 7.182 6 F -0.174 7.174 7 F -0.175 7.175 8 C -0.143 4.143 9 C -0.098 4.098 10 H 0.106 0.894 11 C 0.069 3.931 12 O -0.311 6.311 13 C 0.142 3.858 14 C -0.124 4.124 15 C 0.128 3.872 16 O -0.571 6.571 17 C -0.031 4.031 18 C -0.157 4.157 19 C -0.069 4.069 20 O -0.529 6.529 21 Si 0.681 3.319 22 C -0.076 4.076 23 C -0.202 4.202 24 C -0.112 4.112 25 H 0.103 0.897 26 H 0.055 0.945 27 H 0.055 0.945 28 H 0.113 0.887 29 H 0.094 0.906 30 H 0.067 0.933 31 H 0.086 0.914 32 H 0.060 0.940 33 H 0.061 0.939 34 H 0.385 0.615 35 H 0.143 0.857 36 H 0.117 0.883 37 H 0.375 0.625 38 H -0.261 1.261 39 H -0.257 1.257 40 H 0.129 0.871 41 H 0.133 0.867 42 H 0.099 0.901 43 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.845 2.234 0.955 3.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.250 6.250 3 C -0.004 4.004 4 C 0.382 3.618 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.180 4.180 9 C -0.117 4.117 10 H 0.124 0.876 11 C -0.006 4.006 12 O -0.224 6.224 13 C 0.097 3.903 14 C -0.124 4.124 15 C 0.051 3.949 16 O -0.377 6.377 17 C -0.049 4.049 18 C -0.158 4.158 19 C -0.179 4.179 20 O -0.335 6.335 21 Si 0.583 3.417 22 C -0.094 4.094 23 C -0.221 4.221 24 C -0.149 4.149 25 H 0.121 0.879 26 H 0.073 0.927 27 H 0.073 0.927 28 H 0.131 0.869 29 H 0.113 0.887 30 H 0.085 0.915 31 H 0.104 0.896 32 H 0.078 0.922 33 H 0.079 0.921 34 H 0.233 0.767 35 H 0.161 0.839 36 H 0.135 0.865 37 H 0.222 0.778 38 H -0.186 1.186 39 H -0.182 1.182 40 H 0.146 0.854 41 H 0.151 0.849 42 H 0.118 0.882 43 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -2.325 1.123 0.622 2.656 hybrid contribution -0.042 1.503 -0.349 1.544 sum -2.367 2.626 0.273 3.546 Atomic orbital electron populations 1.23166 0.79456 1.04509 1.01588 1.88090 1.21158 1.21862 1.93843 1.24041 1.00090 0.86349 0.89885 1.21167 0.74273 0.78718 0.87599 1.93186 1.37066 1.89203 1.96841 1.93225 1.94950 1.70515 1.56792 1.93181 1.68629 1.57217 1.96573 1.23599 0.99602 1.01159 0.93678 1.22072 0.97504 0.96498 0.95599 0.87571 1.22763 0.85467 0.95729 0.96617 1.85999 1.35733 1.35428 1.65269 1.18643 0.93430 0.85691 0.92555 1.19075 0.93154 0.97519 1.02697 1.20626 0.85241 0.93237 0.95814 1.86417 1.22252 1.52229 1.76817 1.20711 0.97775 0.91930 0.94467 1.20204 0.94107 0.98717 1.02779 1.24949 1.12981 0.97167 0.82773 1.86606 1.56637 1.67633 1.22656 0.95136 0.74801 0.80120 0.91659 1.20800 0.97485 0.95032 0.96039 1.21093 0.97364 0.97741 1.05886 1.23270 0.90924 1.05828 0.94882 0.87876 0.92656 0.92689 0.86905 0.88706 0.91487 0.89584 0.92233 0.92086 0.76711 0.83933 0.86497 0.77785 1.18619 1.18240 0.85356 0.84911 0.88204 0.86515 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.44 101.05 1.05 1.03 16 2 O -0.33 0.28 8.35 -35.23 -0.29 -0.02 16 3 C 0.04 -0.05 0.85 -89.80 -0.08 -0.13 16 4 C 0.44 0.17 2.52 37.16 0.09 0.26 16 5 F -0.18 -0.12 15.26 2.25 0.03 -0.09 16 6 F -0.17 -0.38 17.09 2.25 0.04 -0.35 16 7 F -0.17 -0.09 15.82 2.25 0.04 -0.06 16 8 C -0.14 0.47 6.52 -25.92 -0.17 0.30 16 9 C -0.10 0.28 4.20 -89.80 -0.38 -0.10 16 10 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 11 C 0.07 -0.13 4.32 37.16 0.16 0.03 16 12 O -0.31 -0.13 9.56 -19.42 -0.19 -0.31 16 13 C 0.14 0.19 6.66 -39.22 -0.26 -0.07 16 14 C -0.12 -0.26 5.89 -104.47 -0.62 -0.88 16 15 C 0.13 0.09 6.91 36.01 0.25 0.34 16 16 O -0.57 -0.50 12.14 -35.23 -0.43 -0.93 16 17 C -0.03 -0.08 8.94 -39.61 -0.35 -0.43 16 18 C -0.16 -0.19 5.39 -104.60 -0.56 -0.76 16 19 C -0.07 -0.05 2.82 36.01 0.10 0.05 16 20 O -0.53 -1.17 12.77 -35.23 -0.45 -1.62 16 21 Si 0.68 -0.31 29.78 -169.99 -5.06 -5.37 16 22 C -0.08 -0.01 8.66 -39.61 -0.34 -0.36 16 23 C -0.20 -0.05 9.04 -39.43 -0.36 -0.40 16 24 C -0.11 0.24 6.89 -25.92 -0.18 0.06 16 25 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 26 H 0.05 -0.09 6.26 -51.92 -0.33 -0.42 16 27 H 0.05 -0.22 6.75 -51.93 -0.35 -0.57 16 28 H 0.11 -0.44 8.07 -51.93 -0.42 -0.86 16 29 H 0.09 -0.39 6.69 -51.93 -0.35 -0.74 16 30 H 0.07 -0.18 7.66 -51.93 -0.40 -0.58 16 31 H 0.09 -0.13 5.64 -51.93 -0.29 -0.43 16 32 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 34 H 0.39 -1.36 9.12 45.56 0.42 -0.95 16 35 H 0.14 0.48 7.00 -52.49 -0.37 0.11 16 36 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 37 H 0.37 -0.23 8.70 45.56 0.40 0.17 16 38 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 39 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 40 H 0.13 -0.23 4.88 -52.48 -0.26 -0.48 16 41 H 0.13 -0.24 6.30 -52.49 -0.33 -0.57 16 42 H 0.10 -0.15 8.10 -51.93 -0.42 -0.57 16 43 H 0.12 -0.34 7.00 -51.93 -0.36 -0.71 16 LS Contribution 357.74 15.07 5.39 5.39 Total: 0.00 -7.19 357.74 -6.92 -14.11 By element: Atomic # 1 Polarization: -5.34 SS G_CDS: -4.36 Total: -9.70 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: -1.64 Total: -1.04 kcal Atomic # 8 Polarization: -1.53 SS G_CDS: -1.36 Total: -2.89 kcal Atomic # 9 Polarization: -0.60 SS G_CDS: 0.11 Total: -0.49 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: -5.06 Total: -5.37 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -7.19 -6.92 -14.11 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8845214_17321602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -234.266 kcal (2) G-P(sol) polarization free energy of solvation -7.188 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -241.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.106 kcal (6) G-S(sol) free energy of system = (1) + (5) -248.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds