Wall clock time and date at job start Mon Mar 8 2021 11:14:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52996 * 109.47573 * 2 1 4 4 C 1.52998 * 109.47038 * 239.99821 * 2 1 3 5 5 Si 1.86302 * 109.46991 * 120.00426 * 2 1 3 6 6 C 1.86303 * 109.47028 * 299.99448 * 5 2 1 7 7 C 1.86300 * 109.47271 * 179.97438 * 5 2 1 8 8 O 1.63098 * 109.47356 * 59.99724 * 5 2 1 9 9 C 1.42903 * 114.00245 * 180.02562 * 8 5 2 10 10 C 1.53000 * 109.47161 * 179.97438 * 9 8 5 11 11 O 1.42904 * 109.46905 * 64.99975 * 10 9 8 12 12 C 1.35901 * 116.99748 * 179.97438 * 11 10 9 13 13 C 1.38723 * 120.03858 * 180.02562 * 12 11 10 14 14 C 1.38176 * 119.99194 * 180.02562 * 13 12 11 15 15 C 1.50706 * 119.96068 * 180.02562 * 14 13 12 16 16 O 1.42889 * 109.46757 * 299.97797 * 15 14 13 17 17 Si 1.86304 * 109.46987 * 179.97438 * 15 14 13 18 18 H 1.48500 * 109.47073 * 59.99961 * 17 15 14 19 19 H 1.48501 * 109.46660 * 180.02562 * 17 15 14 20 20 H 1.48493 * 109.47130 * 299.99872 * 17 15 14 21 21 C 1.38215 * 120.08237 * 359.97438 * 14 13 12 22 22 C 1.38518 * 120.08211 * 359.97438 * 21 14 13 23 23 F 1.35097 * 119.99627 * 179.97438 * 22 21 14 24 24 C 1.38345 * 120.00758 * 359.97438 * 22 21 14 25 25 H 1.09001 * 109.47078 * 299.99955 * 1 2 3 26 26 H 1.08999 * 109.47047 * 59.99204 * 1 2 3 27 27 H 1.08995 * 109.47743 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47125 * 179.97438 * 3 2 1 29 29 H 1.09000 * 109.47141 * 300.00168 * 3 2 1 30 30 H 1.09002 * 109.46826 * 60.00478 * 3 2 1 31 31 H 1.09003 * 109.47270 * 300.00604 * 4 2 1 32 32 H 1.09000 * 109.46872 * 60.00326 * 4 2 1 33 33 H 1.09000 * 109.47769 * 180.02562 * 4 2 1 34 34 H 1.09000 * 109.47164 * 180.02562 * 6 5 2 35 35 H 1.08989 * 109.47308 * 300.00071 * 6 5 2 36 36 H 1.09007 * 109.46878 * 60.00207 * 6 5 2 37 37 H 1.09001 * 109.47258 * 299.99900 * 7 5 2 38 38 H 1.09003 * 109.47123 * 59.99918 * 7 5 2 39 39 H 1.09000 * 109.47303 * 179.97438 * 7 5 2 40 40 H 1.09005 * 109.46972 * 59.99722 * 9 8 5 41 41 H 1.08995 * 109.47113 * 300.00291 * 9 8 5 42 42 H 1.09003 * 109.47548 * 304.99972 * 10 9 8 43 43 H 1.08996 * 109.46838 * 185.00264 * 10 9 8 44 44 H 1.08000 * 120.00491 * 0.03929 * 13 12 11 45 45 H 1.09003 * 109.46723 * 59.97823 * 15 14 13 46 46 H 0.96702 * 114.00436 * 299.99340 * 16 15 14 47 47 H 1.07996 * 119.95886 * 179.72432 * 21 14 13 48 48 H 1.07998 * 120.04639 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0399 -0.7213 -1.2492 5 14 2.1509 -0.8784 1.5211 6 6 1.5300 -0.0001 3.0423 7 6 4.0139 -0.8791 1.5208 8 8 1.6072 -2.4160 1.5211 9 6 2.0284 -3.1815 2.6519 10 6 1.4625 -4.5992 2.5475 11 8 2.0308 -5.2566 1.4130 12 6 1.6313 -6.5337 1.1758 13 6 2.1435 -7.2315 0.0917 14 6 1.7362 -8.5297 -0.1489 15 6 2.2935 -9.2873 -1.3265 16 8 1.9711 -8.5948 -2.5340 17 14 1.5517 -10.9957 -1.3732 18 1 0.0762 -10.8912 -1.5051 19 1 2.1013 -11.7424 -2.5332 20 1 1.8867 -11.7153 -0.1182 21 6 0.8191 -9.1348 0.6896 22 6 0.3064 -8.4414 1.7737 23 9 -0.5903 -9.0343 2.5919 24 6 0.7125 -7.1418 2.0185 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5140 -0.8899 27 1 -0.3634 -1.0276 0.0005 28 1 3.1301 1.4423 0.0005 29 1 1.6768 1.9563 -0.8900 30 1 1.6768 1.9562 0.8901 31 1 1.6765 -1.7489 -1.2492 32 1 1.6766 -0.2074 -2.1392 33 1 3.1299 -0.7217 -1.2491 34 1 1.8937 -0.5137 3.9323 35 1 1.8934 1.0274 3.0423 36 1 0.4400 -0.0001 3.0423 37 1 4.3770 -1.3931 0.6308 38 1 4.3777 0.1485 1.5206 39 1 4.3773 -1.3926 2.4110 40 1 1.6636 -2.7114 3.5652 41 1 3.1172 -3.2254 2.6758 42 1 0.3794 -4.5507 2.4345 43 1 1.7088 -5.1562 3.4514 44 1 2.8606 -6.7601 -0.5640 45 1 3.3765 -9.3640 -1.2295 46 1 1.0219 -8.4897 -2.6858 47 1 0.4988 -10.1480 0.4971 48 1 0.3135 -6.6007 2.8637 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_8925530_10902662.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:14:05 Heat of formation + Delta-G solvation = -193.578397 kcal Electronic energy + Delta-G solvation = -26619.836907 eV Core-core repulsion = 22712.785590 eV Total energy + Delta-G solvation = -3907.051317 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 330.162 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -49.92529 -41.30538 -39.37682 -37.94507 -37.07063 -36.84888 -32.36953 -31.90504 -30.17789 -29.39827 -29.12355 -27.87929 -27.40415 -27.13393 -24.29353 -23.78921 -22.23921 -20.43940 -19.59059 -18.25886 -18.13183 -17.90201 -17.46105 -16.87603 -16.85796 -16.34490 -16.17451 -16.07450 -15.80524 -15.72811 -15.44760 -14.97650 -14.88171 -14.74498 -14.50168 -14.03861 -13.87101 -13.62118 -13.50271 -13.37108 -13.28148 -13.07312 -13.03377 -12.95660 -12.93706 -12.58676 -12.41795 -12.27291 -12.08885 -12.02582 -11.84874 -11.77235 -11.72196 -11.58362 -11.37492 -10.55158 -10.42722 -10.09874 -9.92109 -9.33334 -0.01396 0.16653 1.07933 1.37568 1.41325 1.48687 1.69305 1.86366 2.00185 2.04681 2.37586 2.43393 3.08871 3.35749 3.51528 3.71582 3.83332 3.89463 3.91177 4.06204 4.10332 4.11011 4.13625 4.16107 4.23598 4.44734 4.47077 4.56380 4.61308 4.65488 4.68649 4.71226 4.79364 4.84850 4.89486 4.92728 4.98710 5.09245 5.09477 5.10038 5.14691 5.22281 5.28532 5.32821 5.40035 5.47877 5.49691 5.56877 5.58293 6.27755 6.48594 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.374 4.374 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.287 2.713 6 C -0.512 4.512 7 C -0.511 4.511 8 O -0.619 6.619 9 C 0.087 3.913 10 C 0.053 3.947 11 O -0.294 6.294 12 C 0.165 3.835 13 C -0.133 4.133 14 C -0.053 4.053 15 C -0.080 4.080 16 O -0.534 6.534 17 Si 0.949 3.051 18 H -0.249 1.249 19 H -0.251 1.251 20 H -0.249 1.249 21 C -0.202 4.202 22 C 0.148 3.852 23 F -0.133 7.133 24 C -0.245 4.245 25 H 0.053 0.947 26 H 0.053 0.947 27 H 0.059 0.941 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.055 0.945 31 H 0.061 0.939 32 H 0.053 0.947 33 H 0.054 0.946 34 H 0.066 0.934 35 H 0.075 0.925 36 H 0.072 0.928 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.066 0.934 40 H 0.079 0.921 41 H 0.069 0.931 42 H 0.077 0.923 43 H 0.078 0.922 44 H 0.145 0.855 45 H 0.125 0.875 46 H 0.379 0.621 47 H 0.134 0.866 48 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.492 1.111 1.835 2.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.418 4.418 3 C -0.194 4.194 4 C -0.191 4.191 5 Si 1.418 2.582 6 C -0.614 4.614 7 C -0.613 4.613 8 O -0.578 6.578 9 C 0.011 3.989 10 C -0.022 4.022 11 O -0.207 6.207 12 C 0.119 3.881 13 C -0.152 4.152 14 C -0.053 4.053 15 C -0.191 4.191 16 O -0.339 6.339 17 Si 0.772 3.228 18 H -0.173 1.173 19 H -0.175 1.175 20 H -0.173 1.173 21 C -0.221 4.221 22 C 0.129 3.871 23 F -0.112 7.112 24 C -0.265 4.265 25 H 0.072 0.928 26 H 0.072 0.928 27 H 0.078 0.922 28 H 0.075 0.925 29 H 0.075 0.925 30 H 0.074 0.926 31 H 0.080 0.920 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.085 0.915 35 H 0.094 0.906 36 H 0.092 0.908 37 H 0.093 0.907 38 H 0.093 0.907 39 H 0.085 0.915 40 H 0.097 0.903 41 H 0.087 0.913 42 H 0.095 0.905 43 H 0.096 0.904 44 H 0.162 0.838 45 H 0.143 0.857 46 H 0.226 0.774 47 H 0.152 0.848 48 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 0.725 0.221 1.545 1.721 hybrid contribution -0.549 0.833 0.731 1.237 sum 0.176 1.054 2.276 2.515 Atomic orbital electron populations 1.21511 0.93853 1.01977 1.01769 1.25771 1.00638 1.02594 1.12754 1.21557 1.00791 0.94916 1.02128 1.21509 1.00635 1.00319 0.96659 0.76726 0.63112 0.53293 0.65034 1.27050 1.07024 1.09634 1.17693 1.27028 1.24966 1.04704 1.04569 1.85408 1.79124 1.46043 1.47216 1.22082 0.99424 0.89590 0.87812 1.23105 0.99348 0.92084 0.87654 1.86199 1.64358 1.22926 1.47227 1.18722 0.92033 0.84116 0.93240 1.20323 1.03591 0.93789 0.97505 1.19926 0.95075 0.94197 0.96132 1.25026 1.05877 1.05139 0.83038 1.86536 1.29608 1.79336 1.38429 0.85674 0.80391 0.75263 0.81510 1.17296 1.17466 1.17252 1.20911 1.02331 1.01526 0.97308 1.17198 0.89493 0.90973 0.89470 1.91538 1.64977 1.83673 1.70970 1.21224 1.04695 0.95996 1.04592 0.92757 0.92777 0.92188 0.92503 0.92485 0.92561 0.92047 0.92822 0.92685 0.91520 0.90612 0.90844 0.90715 0.90743 0.91521 0.90300 0.91283 0.90451 0.90383 0.83768 0.85710 0.77412 0.84816 0.83920 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.00 7.85 37.16 0.29 0.29 16 2 C -0.37 0.13 0.53 -90.62 -0.05 0.08 16 3 C -0.14 0.10 7.85 37.16 0.29 0.39 16 4 C -0.13 -0.04 7.85 37.16 0.29 0.25 16 5 Si 1.29 -1.80 8.45 -169.99 -1.44 -3.23 16 6 C -0.51 0.73 8.50 101.05 0.86 1.59 16 7 C -0.51 0.44 8.50 101.05 0.86 1.30 16 8 O -0.62 0.03 8.52 -40.08 -0.34 -0.31 16 9 C 0.09 -0.16 5.51 37.16 0.20 0.05 16 10 C 0.05 -0.07 5.12 37.16 0.19 0.12 16 11 O -0.29 -0.40 10.10 -24.28 -0.25 -0.64 16 12 C 0.17 0.22 6.69 -39.23 -0.26 -0.04 16 13 C -0.13 -0.14 9.55 -39.42 -0.38 -0.52 16 14 C -0.05 -0.02 5.39 -104.65 -0.56 -0.58 16 15 C -0.08 0.07 2.82 36.01 0.10 0.17 16 16 O -0.53 0.09 12.77 -35.23 -0.45 -0.36 16 17 Si 0.95 -0.79 25.07 -169.99 -4.26 -5.05 16 18 H -0.25 0.12 7.11 56.52 0.40 0.52 16 19 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 20 H -0.25 0.04 7.11 56.52 0.40 0.44 16 21 C -0.20 -0.20 8.65 -39.49 -0.34 -0.54 16 22 C 0.15 0.26 7.30 -39.44 -0.29 -0.02 16 23 F -0.13 -0.36 17.27 2.25 0.04 -0.32 16 24 C -0.25 -0.22 9.02 -39.37 -0.35 -0.57 16 25 H 0.05 -0.04 7.79 -51.93 -0.40 -0.44 16 26 H 0.05 0.02 8.14 -51.93 -0.42 -0.41 16 27 H 0.06 0.02 7.96 -51.93 -0.41 -0.40 16 28 H 0.06 -0.07 7.79 -51.93 -0.40 -0.48 16 29 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 30 H 0.06 -0.08 7.79 -51.93 -0.40 -0.48 16 31 H 0.06 0.05 7.97 -51.93 -0.41 -0.36 16 32 H 0.05 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.05 -0.01 7.79 -51.93 -0.40 -0.42 16 34 H 0.07 -0.14 7.48 -51.93 -0.39 -0.52 16 35 H 0.07 -0.11 7.79 -51.94 -0.40 -0.52 16 36 H 0.07 -0.09 7.79 -51.93 -0.40 -0.49 16 37 H 0.07 -0.02 7.79 -51.93 -0.40 -0.42 16 38 H 0.07 -0.08 7.79 -51.93 -0.40 -0.49 16 39 H 0.07 -0.09 7.48 -51.93 -0.39 -0.48 16 40 H 0.08 -0.33 7.21 -51.93 -0.37 -0.71 16 41 H 0.07 -0.18 7.21 -51.93 -0.37 -0.56 16 42 H 0.08 -0.13 7.67 -51.93 -0.40 -0.53 16 43 H 0.08 -0.27 7.66 -51.93 -0.40 -0.66 16 44 H 0.14 0.09 8.06 -52.49 -0.42 -0.33 16 45 H 0.13 -0.24 7.96 -51.93 -0.41 -0.66 16 46 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 47 H 0.13 0.00 4.87 -52.49 -0.26 -0.26 16 48 H 0.14 -0.14 6.30 -52.49 -0.33 -0.47 16 LS Contribution 387.87 15.07 5.85 5.85 Total: 0.00 -5.14 387.87 -7.47 -12.61 By element: Atomic # 1 Polarization: -3.03 SS G_CDS: -7.48 Total: -10.50 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: 0.85 Total: 1.96 kcal Atomic # 8 Polarization: -0.27 SS G_CDS: -1.04 Total: -1.31 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -2.59 SS G_CDS: -5.70 Total: -8.28 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -5.14 -7.47 -12.61 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8925530_10902662.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -180.966 kcal (2) G-P(sol) polarization free energy of solvation -5.140 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.106 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.472 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.613 kcal (6) G-S(sol) free energy of system = (1) + (5) -193.578 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds