Wall clock time and date at job start Mon Mar 8 2021 11:23:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86303 * 109.47308 * 2 1 4 4 C 1.50697 * 109.47175 * 119.99441 * 2 1 3 5 5 C 1.38211 * 119.96567 * 244.97889 * 4 2 1 6 6 C 1.38514 * 120.08850 * 180.02562 * 5 4 2 7 7 F 1.35102 * 119.99693 * 179.97438 * 6 5 4 8 8 C 1.38344 * 120.00571 * 359.67979 * 6 5 4 9 9 C 1.38707 * 119.91768 * 0.59626 * 8 6 5 10 10 O 1.35898 * 120.04583 * 179.69707 * 9 8 6 11 11 C 1.42900 * 116.99563 * 359.73220 * 10 9 8 12 12 C 1.53003 * 109.46913 * 179.97438 * 11 10 9 13 13 H 1.09002 * 112.85017 * 45.32828 * 12 11 10 14 14 C 1.53786 * 113.61503 * 176.52446 * 12 11 10 15 15 C 1.53783 * 87.08050 * 140.06140 * 14 12 11 16 16 H 1.08998 * 113.60991 * 89.11784 * 15 14 12 17 17 O 1.42897 * 113.61314 * 219.93342 * 15 14 12 18 18 C 1.53781 * 113.61337 * 274.13239 * 12 11 10 19 19 C 1.38178 * 119.95973 * 65.00187 * 4 2 1 20 20 H 0.96706 * 114.00203 * 59.99787 * 1 2 3 21 21 H 1.08995 * 109.47488 * 239.99963 * 2 1 3 22 22 H 1.48512 * 109.99608 * 298.67991 * 3 2 1 23 23 H 1.48498 * 110.00500 * 59.99457 * 3 2 1 24 24 H 1.08006 * 119.94891 * 0.02562 * 5 4 2 25 25 H 1.07997 * 120.04156 * 180.31912 * 8 6 5 26 26 H 1.08997 * 109.47593 * 59.99819 * 11 10 9 27 27 H 1.09004 * 109.46944 * 299.99056 * 11 10 9 28 28 H 1.08992 * 113.61675 * 254.61398 * 14 12 11 29 29 H 1.09005 * 113.61030 * 25.43048 * 14 12 11 30 30 H 0.96705 * 113.99407 * 180.02562 * 17 15 14 31 31 H 1.08999 * 113.61567 * 334.48261 * 18 12 11 32 32 H 1.08998 * 113.61196 * 105.38615 * 18 12 11 33 33 H 1.07999 * 120.00072 * 359.95278 * 19 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7103 1.2305 5 6 2.6388 -0.0116 2.1904 6 6 3.1022 -0.6620 3.3221 7 9 3.7941 0.0227 4.2590 8 6 2.8513 -2.0113 3.4961 9 6 2.1462 -2.7141 2.5303 10 8 1.9035 -4.0409 2.6956 11 6 2.4091 -4.6494 3.8856 12 6 2.0400 -6.1342 3.8956 13 1 2.2228 -6.6223 2.9383 14 6 2.6120 -6.9032 5.0983 15 6 1.2682 -7.6481 5.1611 16 1 1.2400 -8.5501 4.5497 17 8 0.7956 -7.8650 6.4921 18 6 0.6441 -6.4180 4.4751 19 6 1.6843 -2.0595 1.3976 20 1 -0.3934 0.4417 -0.7651 21 1 1.7923 -0.5138 -0.8899 22 1 1.5878 2.4585 -1.2244 23 1 1.5614 2.4680 1.2084 24 1 2.8306 1.0430 2.0577 25 1 3.2078 -2.5179 4.3808 26 1 1.9729 -4.1611 4.7570 27 1 3.4937 -4.5442 3.9150 28 1 3.4557 -7.5450 4.8450 29 1 2.8050 -6.2738 5.9672 30 1 -0.0492 -8.3335 6.5380 31 1 0.2985 -5.6567 5.1744 32 1 -0.0999 -6.6686 3.7189 33 1 1.1309 -2.6042 0.6470 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_8925530_11354860.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:23:52 Heat of formation + Delta-G solvation = -108.008835 kcal Electronic energy + Delta-G solvation = -18460.530633 eV Core-core repulsion = 15175.783329 eV Total energy + Delta-G solvation = -3284.747304 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.099 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -49.89501 -41.42361 -40.33709 -38.94742 -37.38571 -36.06338 -32.48741 -31.48735 -29.20462 -27.06064 -26.84412 -23.88935 -23.76165 -22.14378 -20.71404 -19.20220 -18.73276 -18.61723 -17.79065 -17.46113 -17.13790 -17.11423 -16.51793 -16.29256 -15.88387 -15.60493 -15.33840 -14.93629 -14.55478 -14.12698 -13.83547 -13.55665 -13.41572 -13.21451 -12.96354 -12.71085 -12.48379 -12.23261 -12.08823 -11.84278 -11.77457 -11.33472 -10.83527 -10.61151 -9.92211 -9.33604 -5.01038 -0.00709 0.17998 1.17880 1.54336 1.88343 1.97707 2.39414 3.00944 3.15093 3.31759 3.35752 3.44890 3.60136 3.69679 3.80268 3.86264 3.90465 4.03032 4.10034 4.13524 4.20001 4.26316 4.43317 4.55490 4.66656 4.67574 4.86038 4.90802 4.94173 5.01721 5.08670 5.24108 5.26515 5.57983 6.25782 6.35031 6.63051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.077 4.077 3 Si 0.685 3.315 4 C -0.005 4.005 5 C -0.190 4.190 6 C 0.148 3.852 7 F -0.131 7.131 8 C -0.243 4.243 9 C 0.163 3.837 10 O -0.304 6.304 11 C 0.068 3.932 12 C -0.109 4.109 13 H 0.107 0.893 14 C -0.120 4.120 15 C 0.076 3.924 16 H 0.085 0.915 17 O -0.560 6.560 18 C -0.164 4.164 19 C -0.135 4.135 20 H 0.383 0.617 21 H 0.084 0.916 22 H -0.257 1.257 23 H -0.253 1.253 24 H 0.142 0.858 25 H 0.143 0.857 26 H 0.068 0.932 27 H 0.069 0.931 28 H 0.081 0.919 29 H 0.094 0.906 30 H 0.381 0.619 31 H 0.091 0.909 32 H 0.075 0.925 33 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.183 -1.959 -2.633 3.489 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.186 4.186 3 Si 0.586 3.414 4 C -0.006 4.006 5 C -0.208 4.208 6 C 0.129 3.871 7 F -0.110 7.110 8 C -0.263 4.263 9 C 0.117 3.883 10 O -0.217 6.217 11 C -0.007 4.007 12 C -0.128 4.128 13 H 0.125 0.875 14 C -0.157 4.157 15 C 0.017 3.983 16 H 0.103 0.897 17 O -0.366 6.366 18 C -0.202 4.202 19 C -0.154 4.154 20 H 0.231 0.769 21 H 0.102 0.898 22 H -0.182 1.182 23 H -0.178 1.178 24 H 0.159 0.841 25 H 0.161 0.839 26 H 0.086 0.914 27 H 0.088 0.912 28 H 0.100 0.900 29 H 0.112 0.888 30 H 0.228 0.772 31 H 0.109 0.891 32 H 0.093 0.907 33 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.541 -1.239 -2.007 2.818 hybrid contribution -1.367 -0.271 -0.289 1.424 sum 0.174 -1.511 -2.297 2.754 Atomic orbital electron populations 1.86591 1.17283 1.80269 1.49943 1.24791 0.84900 1.11198 0.97721 0.94900 0.91708 0.74300 0.80538 1.18760 0.95149 0.92592 0.94078 1.20857 1.04526 1.00928 0.94515 1.17147 0.93617 0.89398 0.86942 1.91544 1.76490 1.79476 1.63463 1.21221 1.08024 0.94281 1.02773 1.18638 0.93163 0.83179 0.93301 1.86116 1.73925 1.19170 1.42538 1.22917 0.99012 0.92857 0.85941 1.22332 0.97732 0.93064 0.99641 0.87511 1.23065 0.96628 0.98463 0.97586 1.23341 0.95243 0.95982 0.83737 0.89697 1.86523 1.42623 1.80684 1.26740 1.23824 0.96639 0.99378 1.00324 1.20299 1.03628 0.93687 0.97753 0.76888 0.89823 1.18238 1.17757 0.84115 0.83904 0.91367 0.91237 0.90024 0.88766 0.77152 0.89058 0.90673 0.84190 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.44 12.81 -35.23 -0.45 -0.89 16 2 C -0.08 0.03 2.79 36.00 0.10 0.13 16 3 Si 0.68 -0.70 29.85 -169.99 -5.07 -5.78 16 4 C -0.01 -0.01 5.38 -104.66 -0.56 -0.57 16 5 C -0.19 -0.28 8.65 -39.49 -0.34 -0.63 16 6 C 0.15 0.33 7.30 -39.44 -0.29 0.04 16 7 F -0.13 -0.38 17.27 2.25 0.04 -0.35 16 8 C -0.24 -0.38 9.02 -39.37 -0.35 -0.73 16 9 C 0.16 0.32 6.69 -39.23 -0.26 0.06 16 10 O -0.30 -0.50 10.14 -19.42 -0.20 -0.70 16 11 C 0.07 -0.04 4.57 37.16 0.17 0.13 16 12 C -0.11 0.13 4.00 -89.80 -0.36 -0.23 16 13 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 14 C -0.12 0.14 7.47 -25.92 -0.19 -0.05 16 15 C 0.08 -0.07 5.22 -25.77 -0.13 -0.20 16 16 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 17 O -0.56 -0.28 13.68 -35.23 -0.48 -0.76 16 18 C -0.16 0.14 7.49 -25.78 -0.19 -0.06 16 19 C -0.13 -0.25 9.62 -39.42 -0.38 -0.63 16 20 H 0.38 -1.27 8.74 45.56 0.40 -0.87 16 21 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 22 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 23 H -0.25 -0.57 7.05 56.52 0.40 -0.17 16 24 H 0.14 0.01 4.86 -52.48 -0.26 -0.25 16 25 H 0.14 -0.01 6.30 -52.49 -0.33 -0.34 16 26 H 0.07 -0.06 7.38 -51.93 -0.38 -0.44 16 27 H 0.07 -0.11 7.67 -51.93 -0.40 -0.51 16 28 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 29 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 30 H 0.38 -1.31 9.12 45.56 0.42 -0.89 16 31 H 0.09 0.00 7.92 -51.93 -0.41 -0.41 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.14 0.17 8.06 -52.49 -0.42 -0.26 16 LS Contribution 284.75 15.07 4.29 4.29 Total: 0.00 -6.43 284.75 -7.79 -14.22 By element: Atomic # 1 Polarization: -4.19 SS G_CDS: -3.11 Total: -7.30 kcal Atomic # 6 Polarization: 0.07 SS G_CDS: -2.80 Total: -2.73 kcal Atomic # 8 Polarization: -1.22 SS G_CDS: -1.13 Total: -2.35 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.07 Total: -5.78 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -6.43 -7.79 -14.22 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8925530_11354860.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.789 kcal (2) G-P(sol) polarization free energy of solvation -6.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.223 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.786 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.220 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.009 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds