Wall clock time and date at job start Mon Mar 8 2021 09:28:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45199 * 109.47370 * 2 1 4 4 C 1.34225 * 117.00327 * 179.97438 * 3 2 1 5 5 O 1.20831 * 119.99954 * 359.97438 * 4 3 2 6 6 C 1.50702 * 120.00064 * 179.72464 * 4 3 2 7 7 H 1.08993 * 112.85014 * 49.08123 * 6 4 3 8 8 C 1.53778 * 113.61309 * 180.27539 * 6 4 3 9 9 C 1.53777 * 87.08263 * 139.98105 * 8 6 4 10 10 F 1.39906 * 113.61761 * 219.93488 * 9 8 6 11 11 C 1.52998 * 113.61786 * 89.11383 * 9 8 6 12 12 S 1.81397 * 109.47309 * 185.00335 * 11 9 8 13 13 O 1.42101 * 110.54290 * 285.75366 * 12 11 9 14 14 O 1.42098 * 110.54513 * 62.50920 * 12 11 9 15 15 O 1.52211 * 104.44815 * 174.13137 * 12 11 9 16 16 C 1.35914 * 113.99684 * 74.49457 * 15 12 11 17 17 C 1.38697 * 120.47650 * 95.53352 * 16 15 12 18 18 C 1.50704 * 119.65724 * 359.97438 * 17 16 15 19 19 O 1.42897 * 109.47271 * 38.47079 * 18 17 16 20 20 Si 1.86293 * 109.47196 * 158.47048 * 18 17 16 21 21 N 1.31841 * 120.68694 * 179.69752 * 17 16 15 22 22 C 1.31845 * 121.77650 * 0.58918 * 21 17 16 23 23 C 1.38258 * 120.88731 * 359.69884 * 22 21 17 24 24 C 1.38535 * 119.22088 * 359.97438 * 23 22 21 25 25 C 1.53785 * 87.08235 * 334.56561 * 9 8 6 26 26 H 1.08999 * 109.46618 * 60.00519 * 1 2 3 27 27 H 1.08996 * 109.46820 * 179.97438 * 1 2 3 28 28 H 1.08990 * 109.47042 * 299.99998 * 1 2 3 29 29 H 1.09005 * 109.47499 * 239.99973 * 2 1 3 30 30 H 1.08998 * 109.47362 * 120.00037 * 2 1 3 31 31 H 1.09005 * 113.61683 * 254.52577 * 8 6 4 32 32 H 1.09005 * 113.61598 * 25.34705 * 8 6 4 33 33 H 1.09003 * 109.47067 * 305.00474 * 11 9 8 34 34 H 1.09001 * 109.47085 * 64.99759 * 11 9 8 35 35 H 1.09005 * 109.47072 * 278.46854 * 18 17 16 36 36 H 0.96696 * 114.00357 * 65.83234 * 19 18 17 37 37 H 1.48501 * 109.99963 * 179.97438 * 20 18 17 38 38 H 1.48495 * 110.00364 * 301.31714 * 20 18 17 39 39 H 1.07999 * 119.55789 * 179.67756 * 22 21 17 40 40 H 1.07998 * 120.39039 * 180.02562 * 23 22 21 41 41 H 1.07999 * 120.81009 * 180.02562 * 24 23 22 42 42 H 1.08999 * 113.61381 * 270.88933 * 25 9 8 43 43 H 1.08999 * 113.61522 * 139.97462 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9207 2.9374 -0.0057 7 1 3.4738 3.5837 0.7496 8 6 5.4582 2.9680 -0.0110 9 6 5.3532 4.1393 -1.0018 10 9 6.3039 4.0931 -2.0272 11 6 5.2754 5.5094 -0.3253 12 16 5.0067 6.7899 -1.5817 13 8 6.2000 7.0257 -2.3164 14 8 3.7665 6.5857 -2.2446 15 8 4.7991 8.0685 -0.7825 16 6 5.9397 8.5756 -0.2447 17 6 6.6476 9.5690 -0.9048 18 6 6.1466 10.0878 -2.2280 19 8 4.7206 10.1740 -2.1969 20 14 6.8641 11.7777 -2.5443 21 7 7.7513 10.0679 -0.3840 22 6 8.2303 9.6409 0.7677 23 6 7.5835 8.6491 1.4815 24 6 6.4166 8.1018 0.9735 25 6 3.9816 3.5726 -1.4049 26 1 -0.3632 0.5138 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8899 29 1 1.8934 -0.5138 -0.8900 30 1 1.8934 -0.5138 0.8900 31 1 5.8928 3.2461 0.9492 32 1 5.9113 2.0730 -0.4374 33 1 4.4482 5.5176 0.3845 34 1 6.2085 5.7077 0.2020 35 1 6.4523 9.4086 -3.0239 36 1 4.3797 10.8286 -1.5722 37 1 6.3782 12.3002 -3.8466 38 1 6.4810 12.7052 -1.4497 39 1 9.1404 10.0714 1.1587 40 1 7.9828 8.3056 2.4243 41 1 5.8903 7.3261 1.5099 42 1 4.0310 2.8434 -2.2136 43 1 3.2239 4.3387 -1.5699 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10177738_15494190.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:28:11 Heat of formation + Delta-G solvation = -187.647291 kcal Electronic energy + Delta-G solvation = -33848.587738 eV Core-core repulsion = 28905.001672 eV Total energy + Delta-G solvation = -4943.586066 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.096 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -49.09219 -42.81231 -41.92282 -40.31163 -39.70139 -38.36325 -37.99458 -37.54687 -37.23734 -34.09825 -32.85530 -32.34937 -31.72106 -27.78026 -27.48267 -27.23581 -25.52513 -24.13292 -23.69333 -22.51357 -22.05659 -20.64907 -19.92154 -19.24962 -19.05452 -18.97939 -18.63340 -18.07717 -17.77028 -17.52433 -17.32107 -17.04954 -16.71605 -16.38961 -16.33225 -16.15567 -15.69143 -15.49101 -15.09300 -14.95928 -14.82312 -14.66458 -14.42529 -14.29123 -14.07486 -13.86202 -13.83140 -13.80716 -13.67085 -13.33464 -13.23032 -13.15075 -13.02603 -12.87013 -12.65257 -12.57144 -12.52319 -12.17995 -11.87370 -11.60905 -11.59592 -11.48964 -11.40757 -11.15143 -10.82824 -10.22050 -4.72563 -1.36471 -0.43781 -0.37258 0.82581 1.00657 1.29220 1.47497 1.76638 1.98293 2.16407 2.22253 2.46137 2.55268 2.72586 2.75391 2.84518 2.97402 3.00083 3.07584 3.27702 3.39680 3.44811 3.51524 3.63294 3.69427 3.77013 3.89841 3.92935 3.94698 4.03005 4.23398 4.23850 4.31344 4.34909 4.40183 4.47093 4.49970 4.52290 4.57757 4.66597 4.75469 4.83948 4.97118 5.16533 5.36058 6.25637 6.45895 6.61375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.475 3.525 5 O -0.500 6.500 6 C -0.109 4.109 7 H 0.135 0.865 8 C -0.120 4.120 9 C 0.104 3.896 10 F -0.180 7.180 11 C -0.678 4.678 12 S 2.599 3.401 13 O -0.930 6.930 14 O -0.905 6.905 15 O -0.639 6.639 16 C 0.033 3.967 17 C 0.137 3.863 18 C -0.100 4.100 19 O -0.519 6.519 20 Si 0.738 3.262 21 N -0.450 5.450 22 C 0.129 3.871 23 C -0.150 4.150 24 C -0.095 4.095 25 C -0.151 4.151 26 H 0.069 0.931 27 H 0.082 0.918 28 H 0.068 0.932 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.099 0.901 32 H 0.121 0.879 33 H 0.161 0.839 34 H 0.153 0.847 35 H 0.145 0.855 36 H 0.378 0.622 37 H -0.255 1.255 38 H -0.262 1.262 39 H 0.179 0.821 40 H 0.157 0.843 41 H 0.154 0.846 42 H 0.117 0.883 43 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.539 0.507 7.321 7.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.317 3.683 5 O -0.387 6.387 6 C -0.128 4.128 7 H 0.153 0.847 8 C -0.159 4.159 9 C 0.084 3.916 10 F -0.160 7.160 11 C -0.802 4.802 12 S 2.690 3.310 13 O -0.928 6.928 14 O -0.903 6.903 15 O -0.596 6.596 16 C -0.012 4.012 17 C -0.003 4.003 18 C -0.209 4.209 19 O -0.324 6.324 20 Si 0.637 3.363 21 N -0.163 5.163 22 C -0.029 4.029 23 C -0.170 4.170 24 C -0.122 4.122 25 C -0.188 4.188 26 H 0.088 0.912 27 H 0.101 0.899 28 H 0.087 0.913 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.117 0.883 32 H 0.140 0.860 33 H 0.179 0.821 34 H 0.171 0.829 35 H 0.163 0.837 36 H 0.225 0.775 37 H -0.181 1.181 38 H -0.187 1.187 39 H 0.196 0.804 40 H 0.175 0.825 41 H 0.172 0.828 42 H 0.136 0.864 43 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 1.727 1.558 5.646 6.106 hybrid contribution -1.439 -1.585 1.799 2.797 sum 0.288 -0.027 7.445 7.451 Atomic orbital electron populations 1.21829 0.92160 1.03369 1.03777 1.23138 0.95747 0.79525 1.02894 1.86510 1.23917 1.33065 1.83526 1.23102 0.80953 0.91714 0.72481 1.90707 1.60530 1.42645 1.44798 1.22287 0.97209 0.92366 1.00902 0.84710 1.23608 0.93592 0.98180 1.00471 1.21506 0.89124 0.93228 0.87729 1.93001 1.65930 1.97203 1.59838 1.31414 1.14269 1.13645 1.20852 1.05645 0.75295 0.74639 0.75379 1.93659 1.49840 1.81021 1.68306 1.93667 1.43463 1.83821 1.69361 1.85786 1.41719 1.56899 1.75229 1.18769 0.85754 1.00944 0.95691 1.22103 0.90155 0.91280 0.96807 1.25427 0.85450 1.15359 0.94642 1.86670 1.17335 1.63128 1.65249 0.93295 0.91605 0.71627 0.79794 1.67151 1.10399 1.26403 1.12304 1.23162 0.98792 0.92006 0.88904 1.22209 0.94868 0.97627 1.02282 1.22019 0.96648 1.00353 0.93230 1.23907 0.95947 1.02304 0.96663 0.91228 0.89896 0.91326 0.90921 0.90967 0.88268 0.86029 0.82134 0.82915 0.83742 0.77474 1.18066 1.18654 0.80421 0.82506 0.82825 0.86428 0.86756 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.67 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.35 -0.42 10.22 -39.25 -0.40 -0.82 16 4 C 0.48 0.64 7.48 36.01 0.27 0.91 16 5 O -0.50 -2.03 15.65 -18.75 -0.29 -2.32 16 6 C -0.11 0.17 3.91 -90.96 -0.36 -0.19 16 7 H 0.14 -0.61 7.62 -51.93 -0.40 -1.01 16 8 C -0.12 0.19 6.89 -25.92 -0.18 0.01 16 9 C 0.10 -0.04 1.74 -89.81 -0.16 -0.20 16 10 F -0.18 -0.46 16.79 2.25 0.04 -0.43 16 11 C -0.68 1.70 4.65 37.16 0.17 1.87 16 12 S 2.60 5.65 4.86 -107.50 -0.52 5.13 16 13 O -0.93 -4.27 15.28 -67.04 -1.02 -5.29 16 14 O -0.91 -4.51 16.72 -67.04 -1.12 -5.64 16 15 O -0.64 -0.93 8.16 -54.82 -0.45 -1.38 16 16 C 0.03 0.02 4.59 -39.08 -0.18 -0.16 16 17 C 0.14 0.20 5.73 -82.42 -0.47 -0.28 16 18 C -0.10 -0.21 2.44 36.01 0.09 -0.12 16 19 O -0.52 -1.44 11.14 -56.56 -0.63 -2.07 16 20 Si 0.74 0.48 31.65 -169.99 -5.38 -4.90 16 21 N -0.45 0.02 8.12 -9.35 -0.08 -0.06 16 22 C 0.13 -0.40 11.18 -17.54 -0.20 -0.59 16 23 C -0.15 0.65 10.11 -39.46 -0.40 0.25 16 24 C -0.09 0.29 8.56 -39.14 -0.33 -0.05 16 25 C -0.15 0.07 6.95 -25.91 -0.18 -0.11 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 27 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 28 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 31 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 32 H 0.12 -0.03 7.43 -51.93 -0.39 -0.41 16 33 H 0.16 -1.00 7.31 -51.92 -0.38 -1.38 16 34 H 0.15 -0.77 6.56 -51.92 -0.34 -1.11 16 35 H 0.15 0.37 7.17 -51.93 -0.37 0.00 16 36 H 0.38 -0.22 8.59 45.56 0.39 0.17 16 37 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 38 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 39 H 0.18 -1.14 8.06 -52.49 -0.42 -1.56 16 40 H 0.16 -1.19 8.06 -52.49 -0.42 -1.61 16 41 H 0.15 -1.02 7.05 -52.49 -0.37 -1.39 16 42 H 0.12 -0.05 8.09 -51.93 -0.42 -0.47 16 43 H 0.11 -0.09 6.81 -51.93 -0.35 -0.45 16 LS Contribution 375.05 15.07 5.65 5.65 Total: 0.00 -12.39 375.05 -10.72 -23.11 By element: Atomic # 1 Polarization: -8.03 SS G_CDS: -5.20 Total: -13.23 kcal Atomic # 6 Polarization: 3.55 SS G_CDS: -1.31 Total: 2.24 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.08 Total: -0.06 kcal Atomic # 8 Polarization: -13.60 SS G_CDS: -3.92 Total: -17.52 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: 0.48 SS G_CDS: -5.38 Total: -4.90 kcal Atomic # 16 Polarization: 5.65 SS G_CDS: -0.52 Total: 5.13 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -12.39 -10.72 -23.11 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10177738_15494190.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -164.534 kcal (2) G-P(sol) polarization free energy of solvation -12.395 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.929 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.718 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.113 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds