Wall clock time and date at job start Mon Mar 8 2021 09:48:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45198 * 109.47044 * 2 1 4 4 C 1.34235 * 116.99529 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00334 * 0.02562 * 4 3 2 6 6 C 1.50701 * 119.99704 * 179.97438 * 4 3 2 7 7 H 1.08999 * 112.85036 * 48.80421 * 6 4 3 8 8 C 1.53788 * 113.61429 * 180.02562 * 6 4 3 9 9 C 1.53785 * 87.07756 * 139.98166 * 8 6 4 10 10 F 1.39896 * 113.61410 * 89.20508 * 9 8 6 11 11 C 1.53008 * 113.61134 * 220.01737 * 9 8 6 12 12 S 1.81400 * 109.47173 * 178.47310 * 11 9 8 13 13 O 1.42097 * 110.54043 * 68.37599 * 12 11 9 14 14 O 1.42096 * 110.54006 * 291.62614 * 12 11 9 15 15 O 1.52196 * 104.44847 * 180.02562 * 12 11 9 16 16 C 1.35911 * 114.00054 * 74.99925 * 15 12 11 17 17 C 1.38708 * 120.47298 * 89.99519 * 16 15 12 18 18 C 1.50703 * 119.65798 * 0.02562 * 17 16 15 19 19 O 1.42896 * 109.47086 * 29.97106 * 18 17 16 20 20 Si 1.86295 * 109.47295 * 149.97493 * 18 17 16 21 21 N 1.31839 * 120.68587 * 179.97438 * 17 16 15 22 22 C 1.31854 * 121.78030 * 0.02562 * 21 17 16 23 23 C 1.38250 * 120.88231 * 0.02562 * 22 21 17 24 24 C 1.38526 * 119.22705 * 359.97438 * 23 22 21 25 25 C 1.53784 * 87.17663 * 334.60948 * 9 8 6 26 26 H 1.08999 * 109.47212 * 180.02562 * 1 2 3 27 27 H 1.09003 * 109.47321 * 300.00266 * 1 2 3 28 28 H 1.09004 * 109.46936 * 59.99703 * 1 2 3 29 29 H 1.09003 * 109.47321 * 239.99734 * 2 1 3 30 30 H 1.08997 * 109.46890 * 119.99889 * 2 1 3 31 31 H 1.09000 * 113.61028 * 25.43588 * 8 6 4 32 32 H 1.08995 * 113.61115 * 254.52765 * 8 6 4 33 33 H 1.09005 * 109.46749 * 58.47277 * 11 9 8 34 34 H 1.09002 * 109.46973 * 298.47703 * 11 9 8 35 35 H 1.09003 * 109.46606 * 269.97306 * 18 17 16 36 36 H 0.96707 * 113.99677 * 60.00292 * 19 18 17 37 37 H 1.48493 * 110.00299 * 180.02562 * 20 18 17 38 38 H 1.48503 * 109.99798 * 301.31808 * 20 18 17 39 39 H 1.08000 * 119.55594 * 179.72055 * 22 21 17 40 40 H 1.08008 * 120.38707 * 179.97438 * 23 22 21 41 41 H 1.08001 * 120.81638 * 179.97438 * 24 23 22 42 42 H 1.08999 * 113.61101 * 139.93929 * 25 9 8 43 43 H 1.09003 * 113.60824 * 270.84687 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.4709 3.5818 0.7552 8 6 5.4583 2.9680 0.0001 9 6 5.3566 4.1420 -0.9880 10 9 5.2852 5.3931 -0.3663 11 6 6.3989 4.0932 -2.1071 12 16 6.1494 5.4980 -3.2274 13 8 6.4717 6.7188 -2.5756 14 8 4.9338 5.3510 -3.9483 15 8 7.2334 5.3383 -4.2838 16 6 6.9858 4.3518 -5.1852 17 6 6.2892 4.6247 -6.3532 18 6 5.8051 6.0262 -6.6226 19 8 6.6923 6.9629 -6.0083 20 14 5.7614 6.3257 -8.4608 21 7 6.0471 3.6710 -7.2307 22 6 6.4516 2.4310 -7.0379 23 6 7.1505 2.0818 -5.8974 24 6 7.4264 3.0532 -4.9492 25 6 3.9856 3.5787 -1.3981 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 1.8933 -0.5139 -0.8900 30 1 1.8932 -0.5138 0.8900 31 1 5.9128 2.0747 -0.4285 32 1 5.8894 3.2434 0.9625 33 1 6.2918 3.1617 -2.6630 34 1 7.3983 4.1458 -1.6753 35 1 4.8036 6.1501 -6.2103 36 1 7.6035 6.9094 -6.3278 37 1 5.2862 7.7046 -8.7396 38 1 7.1146 6.1286 -9.0397 39 1 6.2296 1.6769 -7.7786 40 1 7.4777 1.0634 -5.7474 41 1 7.9703 2.8088 -4.0486 42 1 3.2297 4.3466 -1.5628 43 1 4.0369 2.8527 -2.2096 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10177738_16464788.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:48:31 Heat of formation + Delta-G solvation = -186.993117 kcal Electronic energy + Delta-G solvation = -34206.310821 eV Core-core repulsion = 29262.753122 eV Total energy + Delta-G solvation = -4943.557699 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.096 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -49.24010 -42.81235 -41.86027 -40.27189 -39.44645 -38.29716 -37.99537 -37.51577 -37.15130 -34.07311 -32.92055 -32.33436 -32.04921 -27.76342 -27.47739 -27.04615 -25.46826 -24.06742 -23.72326 -22.50778 -21.87290 -20.98735 -19.76433 -19.30437 -19.00926 -18.84538 -18.70179 -17.95176 -17.70106 -17.64377 -17.30227 -17.11350 -16.59963 -16.50801 -16.22378 -16.07710 -15.59345 -15.47992 -15.03935 -14.86330 -14.75612 -14.71865 -14.52737 -14.38800 -14.07094 -13.84813 -13.83735 -13.81186 -13.63757 -13.24923 -13.19693 -13.15163 -13.04955 -13.01196 -12.66147 -12.61361 -12.54407 -12.00800 -11.89597 -11.61840 -11.59913 -11.47017 -11.40827 -11.12934 -10.82265 -10.14440 -4.74024 -1.30129 -0.42048 -0.35049 0.87022 0.99204 1.29696 1.48000 1.74274 1.98935 2.21248 2.36708 2.47626 2.60196 2.67859 2.72886 2.81464 2.98943 3.01456 3.12498 3.32462 3.40317 3.46354 3.52947 3.62935 3.73020 3.85723 3.88998 3.91858 4.03808 4.11404 4.16534 4.20819 4.21949 4.36120 4.45665 4.50207 4.51690 4.52661 4.63764 4.64296 4.74080 4.84287 4.95995 5.17496 5.34544 6.26086 6.46983 6.60064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.110 4.110 7 H 0.139 0.861 8 C -0.121 4.121 9 C 0.103 3.897 10 F -0.170 7.170 11 C -0.682 4.682 12 S 2.601 3.399 13 O -0.900 6.900 14 O -0.936 6.936 15 O -0.642 6.642 16 C 0.024 3.976 17 C 0.138 3.862 18 C -0.096 4.096 19 O -0.524 6.524 20 Si 0.737 3.263 21 N -0.451 5.451 22 C 0.130 3.870 23 C -0.155 4.155 24 C -0.087 4.087 25 C -0.143 4.143 26 H 0.082 0.918 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.121 0.879 32 H 0.102 0.898 33 H 0.151 0.849 34 H 0.156 0.844 35 H 0.151 0.849 36 H 0.380 0.620 37 H -0.254 1.254 38 H -0.264 1.264 39 H 0.178 0.822 40 H 0.156 0.844 41 H 0.154 0.846 42 H 0.111 0.889 43 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.733 -7.908 -1.828 8.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.013 4.013 3 O -0.269 6.269 4 C 0.319 3.681 5 O -0.391 6.391 6 C -0.129 4.129 7 H 0.157 0.843 8 C -0.159 4.159 9 C 0.084 3.916 10 F -0.150 7.150 11 C -0.806 4.806 12 S 2.693 3.307 13 O -0.898 6.898 14 O -0.935 6.935 15 O -0.599 6.599 16 C -0.020 4.020 17 C -0.002 4.002 18 C -0.205 4.205 19 O -0.330 6.330 20 Si 0.636 3.364 21 N -0.164 5.164 22 C -0.027 4.027 23 C -0.175 4.175 24 C -0.115 4.115 25 C -0.181 4.181 26 H 0.101 0.899 27 H 0.087 0.913 28 H 0.088 0.912 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.139 0.861 32 H 0.121 0.879 33 H 0.169 0.831 34 H 0.174 0.826 35 H 0.168 0.832 36 H 0.229 0.771 37 H -0.179 1.179 38 H -0.188 1.188 39 H 0.195 0.805 40 H 0.174 0.826 41 H 0.172 0.828 42 H 0.129 0.871 43 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -1.305 -6.589 -3.112 7.403 hybrid contribution 1.901 -0.734 2.189 2.991 sum 0.596 -7.322 -0.923 7.404 Atomic orbital electron populations 1.21832 0.92161 1.03350 1.03816 1.23128 0.95774 0.79578 1.02811 1.86527 1.23971 1.32991 1.83451 1.23201 0.80912 0.91775 0.72259 1.90683 1.60558 1.42723 1.45131 1.22516 0.97150 0.92136 1.01052 0.84342 1.23586 0.93822 0.97678 1.00857 1.21162 0.95382 0.82212 0.92884 1.93020 1.97006 1.41428 1.83533 1.31459 1.09682 1.24882 1.14542 1.05581 0.73954 0.76176 0.74979 1.93684 1.82429 1.38467 1.75194 1.93627 1.46067 1.86612 1.67176 1.85780 1.67814 1.57171 1.49172 1.18802 1.05402 0.85852 0.91969 1.22167 0.91943 0.97532 0.88572 1.25468 0.97637 0.83138 1.14259 1.86626 1.23288 1.56999 1.66060 0.93617 0.86504 0.83001 0.73314 1.67198 1.19118 1.01031 1.29017 1.23167 0.91055 0.92726 0.95802 1.22220 0.99976 1.01011 0.94258 1.21981 0.97252 0.90754 1.01510 1.23805 0.96052 1.01804 0.96423 0.89913 0.91284 0.91239 0.91005 0.90981 0.86122 0.87929 0.83059 0.82621 0.83183 0.77127 1.17872 1.18835 0.80477 0.82589 0.82822 0.87052 0.86734 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.34 10.29 37.16 0.38 0.72 16 2 C 0.06 -0.03 6.19 37.16 0.23 0.20 16 3 O -0.35 -0.33 10.22 -39.27 -0.40 -0.73 16 4 C 0.48 0.47 7.49 36.01 0.27 0.74 16 5 O -0.50 -1.61 15.65 -18.75 -0.29 -1.90 16 6 C -0.11 0.12 4.24 -90.86 -0.39 -0.27 16 7 H 0.14 -0.33 8.14 -51.93 -0.42 -0.75 16 8 C -0.12 0.20 6.86 -25.91 -0.18 0.02 16 9 C 0.10 -0.04 1.60 -89.80 -0.14 -0.18 16 10 F -0.17 -0.39 16.35 2.25 0.04 -0.35 16 11 C -0.68 1.21 5.20 37.16 0.19 1.41 16 12 S 2.60 6.55 4.71 -107.50 -0.51 6.05 16 13 O -0.90 -6.00 17.57 -67.03 -1.18 -7.18 16 14 O -0.94 -3.31 14.70 -67.04 -0.99 -4.29 16 15 O -0.64 -1.07 7.88 -55.05 -0.43 -1.51 16 16 C 0.02 0.01 4.68 -39.07 -0.18 -0.17 16 17 C 0.14 0.16 5.50 -82.41 -0.45 -0.29 16 18 C -0.10 -0.19 2.10 36.01 0.08 -0.11 16 19 O -0.52 -1.61 10.49 -58.09 -0.61 -2.22 16 20 Si 0.74 0.46 31.89 -169.99 -5.42 -4.96 16 21 N -0.45 0.13 8.37 -9.35 -0.08 0.05 16 22 C 0.13 -0.42 11.18 -17.54 -0.20 -0.61 16 23 C -0.15 0.66 10.11 -39.47 -0.40 0.26 16 24 C -0.09 0.25 8.61 -39.14 -0.34 -0.09 16 25 C -0.14 0.17 7.09 -25.82 -0.18 -0.01 16 26 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 29 H 0.07 -0.06 8.13 -51.93 -0.42 -0.48 16 30 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 31 H 0.12 -0.27 7.39 -51.93 -0.38 -0.65 16 32 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 33 H 0.15 -0.72 6.45 -51.92 -0.33 -1.06 16 34 H 0.16 -0.63 8.14 -51.92 -0.42 -1.06 16 35 H 0.15 0.33 7.04 -51.93 -0.37 -0.04 16 36 H 0.38 0.01 8.70 45.56 0.40 0.40 16 37 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 38 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 39 H 0.18 -1.15 8.06 -52.49 -0.42 -1.57 16 40 H 0.16 -1.13 8.06 -52.48 -0.42 -1.56 16 41 H 0.15 -0.91 7.56 -52.49 -0.40 -1.31 16 42 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 43 H 0.11 -0.29 7.94 -51.93 -0.41 -0.70 16 LS Contribution 377.63 15.07 5.69 5.69 Total: 0.00 -11.86 377.63 -10.83 -22.69 By element: Atomic # 1 Polarization: -7.59 SS G_CDS: -5.34 Total: -12.93 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: -1.31 Total: 1.60 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -0.08 Total: 0.05 kcal Atomic # 8 Polarization: -13.93 SS G_CDS: -3.90 Total: -17.83 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: 0.46 SS G_CDS: -5.42 Total: -4.96 kcal Atomic # 16 Polarization: 6.55 SS G_CDS: -0.51 Total: 6.05 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -11.86 -10.83 -22.69 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10177738_16464788.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -164.306 kcal (2) G-P(sol) polarization free energy of solvation -11.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.830 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.687 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds