Wall clock time and date at job start Mon Mar 8 2021 08:31:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45195 * 109.47134 * 2 1 4 4 C 1.34231 * 116.99976 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00318 * 359.97438 * 4 3 2 6 6 C 1.50703 * 120.00076 * 180.02562 * 4 3 2 7 7 H 1.08997 * 112.85230 * 48.79860 * 6 4 3 8 8 C 1.53782 * 113.61358 * 179.97438 * 6 4 3 9 9 C 1.53783 * 87.07936 * 140.06175 * 8 6 4 10 10 F 1.39897 * 113.61410 * 89.20071 * 9 8 6 11 11 C 1.53004 * 113.61390 * 220.01753 * 9 8 6 12 12 S 1.81402 * 109.46964 * 180.02562 * 11 9 8 13 13 O 1.42096 * 110.54229 * 68.37559 * 12 11 9 14 14 O 1.42101 * 110.54284 * 291.62168 * 12 11 9 15 15 O 1.52198 * 104.44603 * 180.02562 * 12 11 9 16 16 C 1.35895 * 114.00258 * 74.99941 * 15 12 11 17 17 C 1.38709 * 120.05826 * 89.99738 * 16 15 12 18 18 C 1.38164 * 119.94688 * 179.97438 * 17 16 15 19 19 C 1.50699 * 119.97569 * 179.97438 * 18 17 16 20 20 F 1.39900 * 109.47157 * 270.02470 * 19 18 17 21 21 F 1.39905 * 109.47105 * 30.02021 * 19 18 17 22 22 F 1.39897 * 109.47566 * 150.02187 * 19 18 17 23 23 C 1.38245 * 120.05645 * 0.02562 * 18 17 16 24 24 C 1.38290 * 120.10982 * 359.97438 * 23 18 17 25 25 C 1.50702 * 119.97267 * 180.02562 * 24 23 18 26 26 O 1.42900 * 109.46766 * 299.99946 * 25 24 23 27 27 Si 1.86299 * 109.47164 * 180.02562 * 25 24 23 28 28 C 1.38126 * 120.05768 * 0.02562 * 24 23 18 29 29 C 1.53780 * 87.08201 * 334.56587 * 9 8 6 30 30 H 1.09001 * 109.47239 * 300.00767 * 1 2 3 31 31 H 1.09002 * 109.46773 * 60.00035 * 1 2 3 32 32 H 1.08995 * 109.47278 * 179.97438 * 1 2 3 33 33 H 1.08997 * 109.47144 * 239.99733 * 2 1 3 34 34 H 1.09002 * 109.46773 * 119.99965 * 2 1 3 35 35 H 1.08999 * 113.61492 * 25.51292 * 8 6 4 36 36 H 1.08996 * 113.61495 * 254.61039 * 8 6 4 37 37 H 1.09002 * 109.46846 * 60.00017 * 11 9 8 38 38 H 1.09004 * 109.46844 * 299.99829 * 11 9 8 39 39 H 1.08001 * 120.02803 * 0.02562 * 17 16 15 40 40 H 1.07995 * 119.94685 * 179.72562 * 23 18 17 41 41 H 1.08996 * 109.47125 * 60.00139 * 25 24 23 42 42 H 0.96698 * 114.00014 * 299.99705 * 26 25 24 43 43 H 1.48496 * 109.99828 * 179.97438 * 27 25 24 44 44 H 1.48500 * 110.00154 * 301.32044 * 27 25 24 45 45 H 1.07998 * 120.03128 * 180.02562 * 28 24 23 46 46 H 1.09004 * 113.61288 * 139.98275 * 29 9 8 47 47 H 1.08990 * 113.61667 * 270.88240 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9208 2.9374 0.0012 7 1 3.4709 3.5812 0.7569 8 6 5.4583 2.9680 0.0024 9 6 5.3573 4.1439 -0.9835 10 9 5.2854 5.3939 -0.3594 11 6 6.4003 4.0973 -2.1020 12 16 6.1806 5.5294 -3.1936 13 8 6.5258 6.7300 -2.5165 14 8 4.9635 5.4213 -3.9191 15 8 7.2630 5.3699 -4.2516 16 6 6.9975 4.4071 -5.1733 17 6 6.3079 4.7273 -6.3334 18 6 6.0397 3.7467 -7.2692 19 6 5.2901 4.0937 -8.5296 20 9 3.9169 3.9358 -8.3139 21 9 5.5573 5.4213 -8.8807 22 9 5.7000 3.2461 -9.5644 23 6 6.4576 2.4473 -7.0497 24 6 7.1452 2.1256 -5.8938 25 6 7.5998 0.7082 -5.6580 26 8 6.4641 -0.1589 -5.6372 27 14 8.4891 0.6050 -4.0243 28 6 7.4158 3.1022 -4.9553 29 6 3.9874 3.5790 -1.3948 30 1 -0.3634 0.5140 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0276 -0.0005 33 1 1.8933 -0.5139 -0.8899 34 1 1.8933 -0.5138 0.8900 35 1 5.9131 2.0756 -0.4276 36 1 5.8888 3.2416 0.9656 37 1 6.2760 3.1795 -2.6766 38 1 7.3998 4.1218 -1.6678 39 1 5.9817 5.7423 -6.5056 40 1 6.2431 1.6814 -7.7802 41 1 8.2740 0.4049 -6.4589 42 1 5.8202 0.0528 -4.9476 43 1 8.9419 -0.7879 -3.7797 44 1 9.6538 1.5262 -4.0209 45 1 7.9533 2.8505 -4.0529 46 1 3.2304 4.3459 -1.5595 47 1 4.0401 2.8537 -2.2067 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10339942_16464788.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:31:55 Heat of formation + Delta-G solvation = -345.750452 kcal Electronic energy + Delta-G solvation = -44415.284555 eV Core-core repulsion = 37966.368987 eV Total energy + Delta-G solvation = -6448.915568 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 443.088 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -51.28495 -49.28827 -48.80382 -48.72349 -42.73911 -41.86856 -40.32515 -39.47755 -38.50071 -37.93664 -37.52040 -37.38125 -34.06752 -32.93910 -32.37360 -32.10324 -27.71680 -27.56623 -27.48499 -26.98497 -25.05613 -24.06496 -23.10995 -22.46832 -21.73312 -21.01582 -20.11553 -19.78644 -19.61250 -19.32100 -19.14971 -18.66399 -18.49324 -18.19683 -17.98160 -17.80426 -17.68498 -17.45738 -17.11528 -16.61118 -16.51440 -16.30182 -16.13159 -15.92069 -15.62959 -15.50873 -15.46133 -15.15704 -14.90166 -14.87066 -14.84072 -14.78325 -14.74590 -14.54556 -14.50151 -14.42103 -14.08008 -13.86128 -13.84730 -13.78802 -13.61874 -13.43801 -13.32346 -13.20836 -13.09619 -13.04822 -13.02667 -12.66225 -12.58443 -12.49233 -12.28807 -12.03799 -11.65509 -11.60722 -11.46696 -11.04112 -10.85295 -10.49975 -5.46223 -1.48338 -0.82967 -0.52700 0.61038 0.83495 0.99041 1.26005 1.37828 1.47559 1.58646 1.67000 2.17607 2.39276 2.43382 2.52247 2.57122 2.64947 2.72278 2.91584 2.99852 3.03013 3.05614 3.11334 3.21968 3.34535 3.40920 3.49924 3.55458 3.67666 3.79567 3.84004 3.88548 3.91938 4.07449 4.09942 4.14345 4.19434 4.21946 4.26700 4.30370 4.43837 4.47588 4.50920 4.51652 4.64609 4.74361 4.81929 4.96441 4.98485 5.34964 6.17941 6.59942 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.502 6.502 6 C -0.110 4.110 7 H 0.138 0.862 8 C -0.121 4.121 9 C 0.103 3.897 10 F -0.170 7.170 11 C -0.678 4.678 12 S 2.588 3.412 13 O -0.898 6.898 14 O -0.933 6.933 15 O -0.655 6.655 16 C 0.072 3.928 17 C -0.035 4.035 18 C -0.162 4.162 19 C 0.513 3.487 20 F -0.167 7.167 21 F -0.171 7.171 22 F -0.170 7.170 23 C -0.023 4.023 24 C -0.101 4.101 25 C -0.067 4.067 26 O -0.531 6.531 27 Si 0.671 3.329 28 C -0.104 4.104 29 C -0.144 4.144 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.082 0.918 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.124 0.876 36 H 0.103 0.897 37 H 0.156 0.844 38 H 0.162 0.838 39 H 0.160 0.840 40 H 0.157 0.843 41 H 0.129 0.871 42 H 0.382 0.618 43 H -0.241 1.241 44 H -0.246 1.246 45 H 0.151 0.849 46 H 0.110 0.890 47 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.909 -4.700 2.267 5.297 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.012 4.012 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.389 6.389 6 C -0.129 4.129 7 H 0.156 0.844 8 C -0.160 4.160 9 C 0.083 3.917 10 F -0.150 7.150 11 C -0.803 4.803 12 S 2.681 3.319 13 O -0.896 6.896 14 O -0.931 6.931 15 O -0.614 6.614 16 C 0.031 3.969 17 C -0.055 4.055 18 C -0.164 4.164 19 C 0.458 3.542 20 F -0.148 7.148 21 F -0.152 7.152 22 F -0.152 7.152 23 C -0.042 4.042 24 C -0.101 4.101 25 C -0.177 4.177 26 O -0.336 6.336 27 Si 0.571 3.429 28 C -0.123 4.123 29 C -0.182 4.182 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.101 0.899 33 H 0.091 0.909 34 H 0.090 0.910 35 H 0.142 0.858 36 H 0.121 0.879 37 H 0.174 0.826 38 H 0.180 0.820 39 H 0.178 0.822 40 H 0.175 0.825 41 H 0.147 0.853 42 H 0.230 0.770 43 H -0.165 1.165 44 H -0.171 1.171 45 H 0.169 0.831 46 H 0.129 0.871 47 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 0.262 -4.709 1.924 5.094 hybrid contribution 0.211 -0.222 -0.239 0.388 sum 0.473 -4.931 1.685 5.232 Atomic orbital electron populations 1.21833 0.92245 1.03342 1.03790 1.23124 0.95718 0.79555 1.02844 1.86525 1.24024 1.32999 1.83441 1.23191 0.80915 0.91772 0.72328 1.90686 1.60510 1.42671 1.45061 1.22476 0.97201 0.92174 1.01046 0.84438 1.23611 0.93819 0.97639 1.00892 1.21168 0.95324 0.82360 0.92811 1.93026 1.96995 1.41511 1.83433 1.31409 1.10158 1.24693 1.14022 1.05851 0.73916 0.76742 0.75357 1.93714 1.81973 1.39953 1.73968 1.93695 1.45391 1.86776 1.67260 1.85826 1.67806 1.59210 1.48534 1.17578 1.03512 0.85271 0.90576 1.21126 0.92734 1.01185 0.90454 1.19921 1.04794 0.95843 0.95830 1.18007 0.77828 0.74863 0.83485 1.93286 1.31558 1.95207 1.94726 1.93242 1.93652 1.35407 1.92893 1.93236 1.90173 1.70813 1.60936 1.21111 0.91945 0.94654 0.96491 1.20223 0.99448 0.96571 0.93884 1.25106 0.94327 0.85848 1.12465 1.86577 1.33460 1.54140 1.59430 0.95247 0.83581 0.83201 0.80873 1.21467 0.98808 0.91135 1.00934 1.23792 0.95975 1.01845 0.96549 0.91320 0.91256 0.89941 0.90916 0.90990 0.85776 0.87893 0.82602 0.81981 0.82206 0.82542 0.85343 0.77007 1.16465 1.17071 0.83143 0.87104 0.86471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.43 10.29 37.16 0.38 0.81 16 2 C 0.06 -0.09 6.19 37.16 0.23 0.14 16 3 O -0.35 0.09 10.22 -39.26 -0.40 -0.31 16 4 C 0.48 -0.29 7.49 36.01 0.27 -0.02 16 5 O -0.50 -0.69 15.65 -18.75 -0.29 -0.99 16 6 C -0.11 0.31 4.24 -90.96 -0.39 -0.08 16 7 H 0.14 -0.52 8.14 -51.93 -0.42 -0.94 16 8 C -0.12 0.45 6.86 -25.92 -0.18 0.28 16 9 C 0.10 -0.27 1.62 -89.81 -0.15 -0.42 16 10 F -0.17 -0.05 16.28 2.25 0.04 -0.01 16 11 C -0.68 2.85 5.18 37.16 0.19 3.04 16 12 S 2.59 0.58 4.89 -107.50 -0.53 0.05 16 13 O -0.90 -3.80 17.53 -67.03 -1.18 -4.98 16 14 O -0.93 -1.35 16.26 -67.04 -1.09 -2.44 16 15 O -0.66 0.15 10.05 -51.73 -0.52 -0.37 16 16 C 0.07 -0.07 4.80 -39.21 -0.19 -0.26 16 17 C -0.03 0.01 8.40 -39.43 -0.33 -0.32 16 18 C -0.16 0.15 5.45 -104.65 -0.57 -0.43 16 19 C 0.51 0.12 3.36 36.01 0.12 0.24 16 20 F -0.17 -0.19 17.30 2.25 0.04 -0.15 16 21 F -0.17 -0.18 16.46 2.25 0.04 -0.15 16 22 F -0.17 -0.07 16.46 2.25 0.04 -0.03 16 23 C -0.02 0.06 8.96 -39.56 -0.35 -0.30 16 24 C -0.10 0.34 5.39 -104.64 -0.56 -0.22 16 25 C -0.07 0.26 2.82 36.01 0.10 0.36 16 26 O -0.53 1.79 12.77 -35.23 -0.45 1.34 16 27 Si 0.67 -2.76 29.79 -169.99 -5.06 -7.83 16 28 C -0.10 0.35 7.08 -39.43 -0.28 0.07 16 29 C -0.14 0.47 7.08 -25.92 -0.18 0.29 16 30 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 31 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 32 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 33 H 0.07 -0.14 8.13 -51.93 -0.42 -0.56 16 34 H 0.07 -0.10 8.13 -51.93 -0.42 -0.52 16 35 H 0.12 -0.61 7.40 -51.93 -0.38 -0.99 16 36 H 0.10 -0.43 8.14 -51.93 -0.42 -0.86 16 37 H 0.16 -1.22 6.40 -51.92 -0.33 -1.56 16 38 H 0.16 -1.12 8.14 -51.92 -0.42 -1.54 16 39 H 0.16 -0.13 7.60 -52.49 -0.40 -0.53 16 40 H 0.16 -0.52 7.60 -52.49 -0.40 -0.92 16 41 H 0.13 -0.50 7.96 -51.93 -0.41 -0.92 16 42 H 0.38 -2.75 8.70 45.56 0.40 -2.35 16 43 H -0.24 0.12 7.11 56.52 0.40 0.53 16 44 H -0.25 0.56 7.11 56.52 0.40 0.96 16 45 H 0.15 -0.91 4.32 -52.49 -0.23 -1.14 16 46 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 47 H 0.12 -0.60 7.92 -51.93 -0.41 -1.01 16 LS Contribution 424.22 15.07 6.39 6.39 Total: 0.00 -11.34 424.22 -10.03 -21.37 By element: Atomic # 1 Polarization: -9.92 SS G_CDS: -5.17 Total: -15.09 kcal Atomic # 6 Polarization: 5.08 SS G_CDS: -1.88 Total: 3.19 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -3.93 Total: -7.75 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.15 Total: -0.35 kcal Atomic # 14 Polarization: -2.76 SS G_CDS: -5.06 Total: -7.83 kcal Atomic # 16 Polarization: 0.58 SS G_CDS: -0.53 Total: 0.05 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -11.34 -10.03 -21.37 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10339942_16464788.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -324.377 kcal (2) G-P(sol) polarization free energy of solvation -11.344 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -335.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.029 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.373 kcal (6) G-S(sol) free energy of system = (1) + (5) -345.750 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds