Wall clock time and date at job start Mon Mar 8 2021 09:05:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42902 * 113.99653 * 2 1 4 4 C 1.53006 * 112.85008 * 65.89489 * 3 2 1 5 5 F 1.39896 * 109.47125 * 283.58465 * 4 3 2 6 6 F 1.39905 * 109.46508 * 43.58489 * 4 3 2 7 7 F 1.39900 * 109.47111 * 163.58120 * 4 3 2 8 8 C 1.53779 * 113.61541 * 294.70062 * 3 2 1 9 9 C 1.53779 * 87.08080 * 270.88610 * 8 3 2 10 10 H 1.09002 * 113.61290 * 219.93663 * 9 8 3 11 11 C 1.52993 * 113.61512 * 89.11637 * 9 8 3 12 12 S 1.81404 * 109.47139 * 175.00056 * 11 9 8 13 13 O 1.42098 * 110.54255 * 68.37381 * 12 11 9 14 14 O 1.42103 * 110.54075 * 291.62372 * 12 11 9 15 15 O 1.52198 * 104.45122 * 179.97438 * 12 11 9 16 16 C 1.35906 * 113.99777 * 75.00213 * 15 12 11 17 17 C 1.38711 * 120.05893 * 90.00136 * 16 15 12 18 18 C 1.38158 * 119.94451 * 180.02562 * 17 16 15 19 19 C 1.50704 * 119.97413 * 179.97438 * 18 17 16 20 20 F 1.39901 * 109.47202 * 269.97978 * 19 18 17 21 21 F 1.39898 * 109.46667 * 29.97830 * 19 18 17 22 22 F 1.39896 * 109.47248 * 149.97669 * 19 18 17 23 23 C 1.38249 * 120.05869 * 359.97438 * 18 17 16 24 24 C 1.38287 * 120.10710 * 0.02562 * 23 18 17 25 25 C 1.50705 * 119.96909 * 179.97438 * 24 23 18 26 26 O 1.42895 * 109.47504 * 300.00287 * 25 24 23 27 27 Si 1.86300 * 109.47001 * 180.02562 * 25 24 23 28 28 C 1.38123 * 120.06101 * 0.02562 * 24 23 18 29 29 C 1.53773 * 113.61225 * 197.20229 * 3 2 1 30 30 H 1.09002 * 109.47135 * 56.91526 * 1 2 3 31 31 H 1.09009 * 109.47085 * 176.91734 * 1 2 3 32 32 H 1.09001 * 109.47474 * 296.91108 * 1 2 3 33 33 H 1.08998 * 113.61363 * 156.33376 * 8 3 2 34 34 H 1.09005 * 113.69144 * 25.44332 * 8 3 2 35 35 H 1.08998 * 109.47758 * 55.00399 * 11 9 8 36 36 H 1.08998 * 109.47544 * 294.99881 * 11 9 8 37 37 H 1.07995 * 120.02711 * 359.97438 * 17 16 15 38 38 H 1.07998 * 119.94280 * 179.74492 * 23 18 17 39 39 H 1.09001 * 109.46996 * 60.00401 * 25 24 23 40 40 H 0.96696 * 114.00125 * 180.02562 * 26 25 24 41 41 H 1.48500 * 110.00002 * 60.00328 * 27 25 24 42 42 H 1.48500 * 110.00195 * 181.32200 * 27 25 24 43 43 H 1.07999 * 120.03349 * 179.97438 * 28 24 23 44 44 H 1.08996 * 113.61880 * 334.56797 * 29 3 2 45 45 H 1.09004 * 113.61692 * 203.66256 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7257 2.0825 1.2870 5 9 0.4089 2.5544 1.2655 6 9 1.9009 1.2389 2.3893 7 9 2.6074 3.1645 1.3831 8 6 1.7228 2.1077 -1.2801 9 6 2.9995 1.4813 -1.8652 10 1 3.5962 2.1768 -2.4554 11 6 2.7569 0.1510 -2.5810 12 16 4.3001 -0.4116 -3.3509 13 8 5.2480 -0.7782 -2.3578 14 8 4.6604 0.4427 -4.4278 15 8 3.9322 -1.7273 -4.0217 16 6 3.2112 -1.5823 -5.1647 17 6 3.8598 -1.4681 -6.3855 18 6 3.1246 -1.3204 -7.5458 19 6 3.8286 -1.1956 -8.8725 20 9 4.0835 0.1537 -9.1401 21 9 5.0373 -1.8985 -8.8268 22 9 3.0184 -1.7263 -9.8820 23 6 1.7436 -1.2868 -7.4910 24 6 1.0946 -1.4004 -6.2752 25 6 -0.4109 -1.3628 -6.2190 26 8 -0.8763 -0.1180 -6.7441 27 14 -0.9709 -1.5385 -4.4508 28 6 1.8251 -1.5473 -5.1121 29 6 3.4903 1.3208 -0.4167 30 1 -0.3633 0.5610 -0.8611 31 1 -0.3634 -1.0263 -0.0553 32 1 -0.3634 0.4651 0.9164 33 1 1.7892 3.1870 -1.1431 34 1 0.8113 1.8015 -1.7935 35 1 1.9955 0.2853 -3.3494 36 1 2.4182 -0.5931 -1.8601 37 1 4.9386 -1.4939 -6.4288 38 1 1.1708 -1.1670 -8.3987 39 1 -0.8172 -2.1821 -6.8122 40 1 -1.8387 -0.0240 -6.7385 41 1 -0.4236 -0.4271 -3.6319 42 1 -2.4544 -1.5350 -4.3851 43 1 1.3178 -1.6356 -4.1627 44 1 4.0057 0.3783 -0.2322 45 1 4.0400 2.1851 -0.0438 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10339942_17541816.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:05:37 Heat of formation + Delta-G solvation = -400.454522 kcal Electronic energy + Delta-G solvation = -46315.768054 eV Core-core repulsion = 39372.480721 eV Total energy + Delta-G solvation = -6943.287333 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 451.070 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -51.24301 -51.23906 -48.79126 -48.75966 -48.67561 -48.67010 -42.63989 -41.67648 -40.19530 -38.42734 -38.02572 -37.56628 -37.29657 -34.10465 -32.34502 -31.93737 -28.66428 -28.06414 -27.54048 -27.45440 -27.05332 -24.99608 -23.77168 -22.96607 -21.80231 -20.85909 -20.11191 -19.80239 -19.67624 -19.56618 -19.54152 -19.32429 -19.13752 -18.90969 -18.44055 -18.31286 -18.03778 -17.50365 -17.16808 -16.71646 -16.48590 -16.18795 -15.97326 -15.85431 -15.70138 -15.59009 -15.57997 -15.46813 -15.42774 -15.15979 -15.11206 -14.96218 -14.87635 -14.85306 -14.82511 -14.80095 -14.75455 -14.59040 -14.50444 -14.20900 -14.04083 -13.72991 -13.57876 -13.51941 -13.42951 -13.33361 -13.30599 -13.24846 -13.18739 -12.60000 -12.52112 -12.44769 -12.30963 -12.23212 -11.65270 -11.04164 -10.99916 -10.82320 -10.40311 -5.35540 -1.34705 -0.73909 -0.43127 0.71466 0.80440 1.18232 1.43185 1.45387 1.54495 1.67013 1.85637 2.27615 2.41545 2.47507 2.51181 2.63085 2.64721 2.68957 2.81635 2.93730 3.06480 3.16635 3.21704 3.23394 3.27898 3.39250 3.41779 3.48783 3.61673 3.66345 3.81474 3.91832 3.95436 4.05099 4.05829 4.15412 4.18671 4.28408 4.36221 4.37046 4.38741 4.47642 4.54788 4.57254 4.59901 4.64739 5.06040 5.47031 6.04826 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.007 3.993 2 O -0.331 6.331 3 C 0.041 3.959 4 C 0.438 3.562 5 F -0.181 7.181 6 F -0.172 7.172 7 F -0.173 7.173 8 C -0.138 4.138 9 C -0.091 4.091 10 H 0.112 0.888 11 C -0.647 4.647 12 S 2.588 3.412 13 O -0.909 6.909 14 O -0.941 6.941 15 O -0.655 6.655 16 C 0.075 3.925 17 C -0.036 4.036 18 C -0.163 4.163 19 C 0.513 3.487 20 F -0.167 7.167 21 F -0.171 7.171 22 F -0.171 7.171 23 C -0.023 4.023 24 C -0.054 4.054 25 C -0.077 4.077 26 O -0.532 6.532 27 Si 0.669 3.331 28 C -0.098 4.098 29 C -0.125 4.125 30 H 0.054 0.946 31 H 0.104 0.896 32 H 0.056 0.944 33 H 0.114 0.886 34 H 0.096 0.904 35 H 0.139 0.861 36 H 0.159 0.841 37 H 0.160 0.840 38 H 0.155 0.845 39 H 0.092 0.908 40 H 0.387 0.613 41 H -0.245 1.245 42 H -0.248 1.248 43 H 0.152 0.848 44 H 0.111 0.889 45 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.871 -2.220 -1.063 7.298 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 O -0.249 6.249 3 C -0.001 4.001 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.153 7.153 7 F -0.155 7.155 8 C -0.176 4.176 9 C -0.111 4.111 10 H 0.130 0.870 11 C -0.773 4.773 12 S 2.683 3.317 13 O -0.907 6.907 14 O -0.940 6.940 15 O -0.613 6.613 16 C 0.033 3.967 17 C -0.056 4.056 18 C -0.165 4.165 19 C 0.459 3.541 20 F -0.148 7.148 21 F -0.152 7.152 22 F -0.152 7.152 23 C -0.042 4.042 24 C -0.054 4.054 25 C -0.187 4.187 26 O -0.340 6.340 27 Si 0.568 3.432 28 C -0.118 4.118 29 C -0.162 4.162 30 H 0.072 0.928 31 H 0.123 0.877 32 H 0.074 0.926 33 H 0.133 0.867 34 H 0.115 0.885 35 H 0.158 0.842 36 H 0.177 0.823 37 H 0.178 0.822 38 H 0.172 0.828 39 H 0.110 0.890 40 H 0.236 0.764 41 H -0.169 1.169 42 H -0.172 1.172 43 H 0.169 0.831 44 H 0.129 0.871 45 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -5.814 -2.132 -0.565 6.218 hybrid contribution -1.585 1.071 -0.175 1.921 sum -7.399 -1.062 -0.740 7.511 Atomic orbital electron populations 1.23185 0.79516 1.04473 1.01681 1.88045 1.21107 1.21902 1.93849 1.23943 0.99681 0.86411 0.90110 1.21098 0.74356 0.78757 0.87451 1.93193 1.36901 1.89361 1.96816 1.93231 1.94942 1.70620 1.56530 1.93188 1.68830 1.56896 1.96554 1.23594 0.99239 1.01149 0.93639 1.21694 0.99362 0.94008 0.95989 0.86959 1.30911 1.24157 1.08325 1.13945 1.05804 0.76966 0.73464 0.75492 1.93685 1.56235 1.80082 1.60699 1.93692 1.81491 1.67389 1.51414 1.85796 1.73595 1.59125 1.42791 1.17493 0.88767 1.07785 0.82652 1.21107 1.02319 0.92632 0.89567 1.19882 0.94934 1.09160 0.92519 1.17999 0.77068 0.74535 0.84522 1.93285 1.94200 1.32759 1.94602 1.93238 1.46513 1.78863 1.96563 1.93228 1.72781 1.86314 1.62875 1.21063 0.92038 0.91660 0.99400 1.18986 0.94420 1.00252 0.91752 1.24755 0.92508 0.89725 1.11663 1.86571 1.27762 1.35404 1.84255 0.95240 0.82513 0.89515 0.75919 1.21348 0.91857 0.98702 0.99889 1.23497 0.91598 1.07125 0.94006 0.92789 0.87747 0.92556 0.86722 0.88542 0.84243 0.82298 0.82240 0.82763 0.89011 0.76358 1.16938 1.17230 0.83096 0.87060 0.85507 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 101.05 1.04 1.03 16 2 O -0.33 0.27 8.35 -35.23 -0.29 -0.03 16 3 C 0.04 -0.04 0.85 -89.81 -0.08 -0.11 16 4 C 0.44 0.29 2.51 37.16 0.09 0.38 16 5 F -0.18 -0.16 15.37 2.25 0.03 -0.12 16 6 F -0.17 -0.40 17.09 2.25 0.04 -0.36 16 7 F -0.17 -0.13 15.83 2.25 0.04 -0.10 16 8 C -0.14 0.36 6.51 -25.92 -0.17 0.19 16 9 C -0.09 0.20 3.84 -89.81 -0.35 -0.14 16 10 H 0.11 -0.39 8.13 -51.93 -0.42 -0.82 16 11 C -0.65 1.54 5.04 37.15 0.19 1.73 16 12 S 2.59 1.79 5.16 -107.50 -0.55 1.24 16 13 O -0.91 -3.30 18.09 -67.04 -1.21 -4.51 16 14 O -0.94 -2.56 16.26 -67.03 -1.09 -3.65 16 15 O -0.65 -0.12 10.05 -51.77 -0.52 -0.64 16 16 C 0.07 -0.02 4.80 -39.21 -0.19 -0.21 16 17 C -0.04 -0.01 8.40 -39.44 -0.33 -0.34 16 18 C -0.16 0.02 5.45 -104.65 -0.57 -0.55 16 19 C 0.51 0.39 3.36 36.01 0.12 0.51 16 20 F -0.17 -0.34 17.30 2.25 0.04 -0.30 16 21 F -0.17 -0.23 16.46 2.25 0.04 -0.19 16 22 F -0.17 -0.10 16.46 2.25 0.04 -0.06 16 23 C -0.02 0.03 8.96 -39.56 -0.35 -0.32 16 24 C -0.05 0.13 5.42 -104.64 -0.57 -0.44 16 25 C -0.08 0.31 2.81 36.01 0.10 0.41 16 26 O -0.53 1.54 12.74 -35.23 -0.45 1.09 16 27 Si 0.67 -3.14 29.79 -169.99 -5.06 -8.21 16 28 C -0.10 0.24 7.08 -39.43 -0.28 -0.04 16 29 C -0.13 0.18 6.89 -25.92 -0.18 0.01 16 30 H 0.05 -0.19 6.60 -51.93 -0.34 -0.53 16 31 H 0.10 -0.46 8.14 -51.92 -0.42 -0.88 16 32 H 0.06 -0.10 6.60 -51.93 -0.34 -0.44 16 33 H 0.11 -0.41 8.06 -51.93 -0.42 -0.83 16 34 H 0.10 -0.32 6.65 -51.93 -0.35 -0.67 16 35 H 0.14 -0.58 6.60 -51.92 -0.34 -0.92 16 36 H 0.16 -0.55 6.12 -51.92 -0.32 -0.87 16 37 H 0.16 -0.04 7.60 -52.49 -0.40 -0.44 16 38 H 0.15 -0.42 7.60 -52.49 -0.40 -0.82 16 39 H 0.09 -0.55 7.96 -51.93 -0.41 -0.96 16 40 H 0.39 -2.55 8.74 45.56 0.40 -2.15 16 41 H -0.25 0.81 7.11 56.52 0.40 1.21 16 42 H -0.25 0.64 7.11 56.52 0.40 1.04 16 43 H 0.15 -0.77 4.31 -52.49 -0.23 -1.00 16 44 H 0.11 -0.13 8.10 -51.93 -0.42 -0.55 16 45 H 0.13 -0.35 7.02 -51.93 -0.36 -0.71 16 LS Contribution 403.67 15.07 6.08 6.08 Total: 0.00 -9.65 403.67 -8.37 -18.01 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -3.98 Total: -10.34 kcal Atomic # 6 Polarization: 3.59 SS G_CDS: -1.51 Total: 2.08 kcal Atomic # 8 Polarization: -4.17 SS G_CDS: -3.57 Total: -7.73 kcal Atomic # 9 Polarization: -1.35 SS G_CDS: 0.22 Total: -1.13 kcal Atomic # 14 Polarization: -3.14 SS G_CDS: -5.06 Total: -8.21 kcal Atomic # 16 Polarization: 1.79 SS G_CDS: -0.55 Total: 1.24 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.65 -8.37 -18.01 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10339942_17541816.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -382.442 kcal (2) G-P(sol) polarization free energy of solvation -9.645 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -392.088 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.367 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.012 kcal (6) G-S(sol) free energy of system = (1) + (5) -400.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds