Wall clock time and date at job start Mon Mar 8 2021 08:35:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34227 * 117.00168 * 2 1 4 4 O 1.20828 * 119.99537 * 0.02562 * 3 2 1 5 5 C 1.50694 * 120.00427 * 179.97438 * 3 2 1 6 6 H 1.09006 * 112.84665 * 48.80493 * 5 3 2 7 7 C 1.53776 * 113.61713 * 180.02562 * 5 3 2 8 8 C 1.53785 * 87.08349 * 139.98384 * 7 5 3 9 9 H 1.09000 * 113.61221 * 89.20124 * 8 7 5 10 10 S 1.81398 * 113.61369 * 220.02390 * 8 7 5 11 11 O 1.42095 * 110.54763 * 68.36942 * 10 8 7 12 12 O 1.42104 * 110.53900 * 291.61845 * 10 8 7 13 13 O 1.52203 * 104.44909 * 179.97438 * 10 8 7 14 14 C 1.35926 * 114.00053 * 74.99420 * 13 10 8 15 15 C 1.38817 * 120.05709 * 90.00542 * 14 13 10 16 16 Cl 1.73593 * 120.03767 * 359.95166 * 15 14 13 17 17 C 1.38257 * 119.91878 * 179.97438 * 15 14 13 18 18 C 1.50706 * 119.97314 * 179.97438 * 17 15 14 19 19 O 1.42901 * 109.47017 * 75.00073 * 18 17 15 20 20 Si 1.86301 * 109.46932 * 194.99696 * 18 17 15 21 21 C 1.38240 * 120.04574 * 0.27049 * 17 15 14 22 22 C 1.38284 * 120.11773 * 359.45041 * 21 17 15 23 23 C 1.38148 * 120.07376 * 0.55266 * 22 21 17 24 24 C 1.53781 * 87.07901 * 334.56783 * 8 7 5 25 25 H 1.08996 * 109.47419 * 60.00112 * 1 2 3 26 26 H 1.08999 * 109.47032 * 179.97438 * 1 2 3 27 27 H 1.08996 * 109.47146 * 299.99653 * 1 2 3 28 28 H 1.09000 * 113.61534 * 25.43212 * 7 5 3 29 29 H 1.09004 * 113.61852 * 254.53279 * 7 5 3 30 30 H 1.08996 * 109.47392 * 314.99549 * 18 17 15 31 31 H 0.96699 * 113.99482 * 179.97438 * 19 18 17 32 32 H 1.48504 * 110.00052 * 300.00222 * 20 18 17 33 33 H 1.48503 * 110.00024 * 61.31904 * 20 18 17 34 34 H 1.08001 * 119.93891 * 179.72761 * 21 17 15 35 35 H 1.08002 * 119.95745 * 180.29871 * 22 21 17 36 36 H 1.08007 * 120.01611 * 179.70106 * 23 22 21 37 37 H 1.08997 * 113.61555 * 139.97649 * 24 8 7 38 38 H 1.09005 * 113.61507 * 270.88771 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0239 0.6362 -0.7550 7 6 4.1077 2.7142 0.0011 8 6 5.1807 2.2266 0.9890 9 1 6.0812 1.8494 0.5043 10 16 5.5381 3.4102 2.3163 11 8 4.4261 3.5270 3.1932 12 8 6.1843 4.5636 1.7952 13 8 6.6078 2.7273 3.1564 14 6 7.8420 2.7277 2.5868 15 6 8.7204 3.7744 2.8316 16 17 8.2436 5.0853 3.8649 17 6 9.9752 3.7716 2.2512 18 6 10.9296 4.9076 2.5157 19 8 11.4682 4.7802 3.8332 20 14 12.3150 4.8573 1.2711 21 6 10.3527 2.7307 1.4235 22 6 9.4812 1.6844 1.1830 23 6 8.2262 1.6821 1.7604 24 6 4.1906 1.1232 1.3978 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 3.4171 3.4403 0.4299 29 1 4.5111 3.0294 -0.9612 30 1 10.3987 5.8557 2.4302 31 1 12.0923 5.4791 4.0722 32 1 13.0468 3.5695 1.3774 33 1 11.7711 5.0206 -0.1011 34 1 11.3317 2.7326 0.9675 35 1 9.7806 0.8701 0.5398 36 1 7.5444 0.8668 1.5680 37 1 4.6609 0.1538 1.5629 38 1 3.5226 1.4143 2.2084 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10544596_13206342.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:35:32 Heat of formation + Delta-G solvation = -148.209265 kcal Electronic energy + Delta-G solvation = -28961.698864 eV Core-core repulsion = 24505.978292 eV Total energy + Delta-G solvation = -4455.720572 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.040 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.44729 -41.94766 -39.99657 -39.68900 -38.32295 -37.68490 -37.54230 -37.37659 -37.20794 -33.08398 -31.74255 -29.98886 -27.93538 -27.33024 -27.16988 -25.03852 -23.79135 -23.01251 -21.60241 -20.90927 -19.87864 -19.14480 -18.85057 -18.54170 -18.48215 -18.22347 -17.86385 -17.53811 -17.04039 -16.74323 -16.32569 -15.89216 -15.52596 -15.42901 -14.87830 -14.82917 -14.59460 -14.44541 -14.26446 -14.09583 -13.97718 -13.84909 -13.62733 -13.51285 -13.26830 -13.17625 -13.14799 -13.05373 -12.83257 -12.66919 -12.53956 -12.12033 -12.10251 -11.85715 -11.85001 -11.73834 -11.34155 -10.48845 -10.38692 -10.06342 -5.12825 -1.25695 -0.40957 -0.33317 0.73637 0.93784 1.04567 1.10407 1.49450 1.58721 1.76450 1.90928 2.36059 2.47072 2.71664 2.89928 2.99620 3.01094 3.30673 3.36093 3.42255 3.53867 3.69649 3.76729 3.77599 3.93196 3.98432 4.12435 4.17672 4.19071 4.21821 4.28376 4.33386 4.42089 4.45852 4.49860 4.56462 4.72417 4.74025 4.81318 5.19234 5.29327 6.50156 6.62355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.356 6.356 3 C 0.467 3.533 4 O -0.498 6.498 5 C -0.096 4.096 6 H 0.138 0.862 7 C -0.086 4.086 8 C -0.656 4.656 9 H 0.162 0.838 10 S 2.591 3.409 11 O -0.910 6.910 12 O -0.934 6.934 13 O -0.652 6.652 14 C 0.075 3.925 15 C 0.011 3.989 16 Cl -0.018 7.018 17 C -0.049 4.049 18 C -0.083 4.083 19 O -0.538 6.538 20 Si 0.695 3.305 21 C -0.094 4.094 22 C -0.091 4.091 23 C -0.115 4.115 24 C -0.093 4.093 25 H 0.065 0.935 26 H 0.105 0.895 27 H 0.066 0.934 28 H 0.109 0.891 29 H 0.106 0.894 30 H 0.084 0.916 31 H 0.386 0.614 32 H -0.246 1.246 33 H -0.249 1.249 34 H 0.143 0.857 35 H 0.153 0.847 36 H 0.155 0.845 37 H 0.106 0.894 38 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.503 -3.611 -4.521 7.985 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.272 6.272 3 C 0.309 3.691 4 O -0.385 6.385 5 C -0.115 4.115 6 H 0.156 0.844 7 C -0.124 4.124 8 C -0.762 4.762 9 H 0.180 0.820 10 S 2.685 3.315 11 O -0.908 6.908 12 O -0.932 6.932 13 O -0.611 6.611 14 C 0.032 3.968 15 C -0.019 4.019 16 Cl 0.012 6.988 17 C -0.050 4.050 18 C -0.193 4.193 19 O -0.344 6.344 20 Si 0.595 3.405 21 C -0.113 4.113 22 C -0.109 4.109 23 C -0.135 4.135 24 C -0.131 4.131 25 H 0.084 0.916 26 H 0.123 0.877 27 H 0.085 0.915 28 H 0.128 0.872 29 H 0.125 0.875 30 H 0.102 0.898 31 H 0.235 0.765 32 H -0.170 1.170 33 H -0.173 1.173 34 H 0.160 0.840 35 H 0.171 0.829 36 H 0.173 0.827 37 H 0.125 0.875 38 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 5.062 -3.631 -4.508 7.690 hybrid contribution -1.059 -0.487 -0.090 1.169 sum 4.003 -4.118 -4.598 7.357 Atomic orbital electron populations 1.23366 0.75619 1.04163 1.02931 1.86499 1.23979 1.32967 1.83743 1.23435 0.91476 0.81698 0.72515 1.90715 1.66816 1.36388 1.44545 1.22426 0.88010 1.00092 1.01022 0.84374 1.22618 0.93914 0.95966 0.99903 1.32313 1.08174 1.16636 1.19052 0.82048 1.05794 0.74632 0.75444 0.75613 1.93678 1.51183 1.84860 1.61126 1.93691 1.72086 1.46322 1.81125 1.85770 1.27489 1.85341 1.62480 1.17726 0.82651 0.96885 0.99541 1.20951 0.94089 0.90913 0.95898 1.98427 1.91243 1.45172 1.64003 1.19238 0.92386 0.96460 0.96964 1.24783 1.02604 0.97643 0.94236 1.86501 1.64412 1.53980 1.29541 0.94691 0.82429 0.86243 0.77143 1.21269 1.00222 0.92850 0.96913 1.21101 0.92048 0.98645 0.99081 1.21404 0.98710 0.97004 0.96374 1.22674 0.95527 0.98424 0.96451 0.91613 0.87695 0.91524 0.87248 0.87531 0.89763 0.76548 1.17045 1.17328 0.83992 0.82949 0.82739 0.87509 0.87025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.35 10.57 -39.25 -0.41 -0.76 16 3 C 0.47 0.77 7.48 36.00 0.27 1.04 16 4 O -0.50 -2.39 15.65 -18.75 -0.29 -2.69 16 5 C -0.10 0.15 4.26 -90.96 -0.39 -0.23 16 6 H 0.14 -0.62 8.14 -51.93 -0.42 -1.05 16 7 C -0.09 0.09 6.99 -25.92 -0.18 -0.09 16 8 C -0.66 1.10 4.03 -25.92 -0.10 0.99 16 9 H 0.16 -0.81 6.10 -51.93 -0.32 -1.12 16 10 S 2.59 7.65 5.12 -107.50 -0.55 7.10 16 11 O -0.91 -5.63 17.27 -67.04 -1.16 -6.79 16 12 O -0.93 -4.48 15.18 -67.03 -1.02 -5.50 16 13 O -0.65 -1.88 9.51 -51.83 -0.49 -2.37 16 14 C 0.07 0.16 4.79 -39.20 -0.19 -0.03 16 15 C 0.01 0.04 5.65 -39.36 -0.22 -0.18 16 16 Cl -0.02 -0.09 25.90 -51.86 -1.34 -1.43 16 17 C -0.05 -0.08 5.30 -104.61 -0.55 -0.64 16 18 C -0.08 0.03 2.08 36.01 0.07 0.10 16 19 O -0.54 0.19 12.80 -35.23 -0.45 -0.26 16 20 Si 0.70 -1.78 30.18 -169.99 -5.13 -6.91 16 21 C -0.09 0.04 8.66 -39.56 -0.34 -0.30 16 22 C -0.09 0.21 10.04 -39.60 -0.40 -0.19 16 23 C -0.11 0.18 8.50 -39.44 -0.34 -0.15 16 24 C -0.09 0.18 7.19 -25.92 -0.19 0.00 16 25 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 26 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 27 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 28 H 0.11 0.06 7.39 -51.93 -0.38 -0.32 16 29 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 30 H 0.08 -0.07 7.41 -51.93 -0.38 -0.46 16 31 H 0.39 -2.06 8.74 45.56 0.40 -1.66 16 32 H -0.25 0.15 6.75 56.52 0.38 0.54 16 33 H -0.25 0.08 7.11 56.52 0.40 0.48 16 34 H 0.14 -0.25 4.89 -52.49 -0.26 -0.51 16 35 H 0.15 -0.86 8.06 -52.49 -0.42 -1.29 16 36 H 0.16 -0.82 7.25 -52.48 -0.38 -1.20 16 37 H 0.11 -0.51 8.14 -51.93 -0.42 -0.93 16 38 H 0.11 -0.06 7.38 -51.93 -0.38 -0.44 16 LS Contribution 347.62 15.07 5.24 5.24 Total: 0.00 -12.44 347.62 -10.98 -23.43 By element: Atomic # 1 Polarization: -6.51 SS G_CDS: -3.88 Total: -10.39 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -1.49 Total: 1.35 kcal Atomic # 8 Polarization: -14.55 SS G_CDS: -3.83 Total: -18.38 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.13 Total: -6.91 kcal Atomic # 16 Polarization: 7.65 SS G_CDS: -0.55 Total: 7.10 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.34 Total: -1.43 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -12.44 -10.98 -23.43 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10544596_13206342.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.784 kcal (2) G-P(sol) polarization free energy of solvation -12.442 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.225 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.984 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.426 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.209 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds