Wall clock time and date at job start Mon Mar 8 2021 10:08:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45202 * 109.47563 * 2 1 4 4 C 1.34221 * 117.00212 * 179.97438 * 3 2 1 5 5 O 1.20828 * 120.00137 * 359.97438 * 4 3 2 6 6 C 1.50699 * 120.00048 * 179.97438 * 4 3 2 7 7 H 1.08997 * 112.85195 * 311.19921 * 6 4 3 8 8 C 1.54055 * 113.69333 * 82.46730 * 6 4 3 9 9 C 1.53785 * 86.98685 * 139.99133 * 8 6 4 10 10 F 1.39900 * 113.61268 * 219.98118 * 9 8 6 11 11 C 1.52998 * 113.61473 * 89.15923 * 9 8 6 12 12 S 1.81404 * 109.46991 * 80.86693 * 11 9 8 13 13 O 1.42100 * 110.54055 * 68.37128 * 12 11 9 14 14 O 1.42101 * 110.54189 * 291.62522 * 12 11 9 15 15 O 1.52199 * 104.45068 * 179.97438 * 12 11 9 16 16 C 1.35927 * 113.99712 * 75.00003 * 15 12 11 17 17 C 1.38816 * 120.05996 * 270.29245 * 16 15 12 18 18 Cl 1.73605 * 120.03807 * 359.97438 * 17 16 15 19 19 C 1.38250 * 119.92549 * 180.23604 * 17 16 15 20 20 C 1.50699 * 119.98141 * 179.76912 * 19 17 16 21 21 O 1.42907 * 109.46603 * 74.72774 * 20 19 17 22 22 Si 1.86298 * 109.47032 * 194.72077 * 20 19 17 23 23 C 1.38257 * 120.04035 * 359.49562 * 19 17 16 24 24 C 1.38275 * 120.11509 * 0.22836 * 23 19 17 25 25 C 1.38149 * 120.08224 * 0.02880 * 24 23 19 26 26 C 1.53782 * 113.61558 * 179.97438 * 6 4 3 27 27 H 1.09002 * 109.47591 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47231 * 300.00558 * 1 2 3 29 29 H 1.09005 * 109.46701 * 60.00270 * 1 2 3 30 30 H 1.08996 * 109.47231 * 239.99442 * 2 1 3 31 31 H 1.09005 * 109.46701 * 119.99730 * 2 1 3 32 32 H 1.09003 * 113.61042 * 25.48549 * 8 6 4 33 33 H 1.09003 * 113.69524 * 254.50763 * 8 6 4 34 34 H 1.09000 * 109.47142 * 320.87114 * 11 9 8 35 35 H 1.08999 * 109.47016 * 200.86311 * 11 9 8 36 36 H 1.08996 * 109.47117 * 314.72687 * 20 19 17 37 37 H 0.96697 * 114.00527 * 59.99993 * 21 20 19 38 38 H 1.48506 * 109.99834 * 58.68765 * 22 20 19 39 39 H 1.48502 * 110.00011 * 180.02562 * 22 20 19 40 40 H 1.07991 * 119.93754 * 180.25780 * 23 19 17 41 41 H 1.08005 * 119.95725 * 180.02562 * 24 23 19 42 42 H 1.08000 * 120.02388 * 180.02562 * 25 24 23 43 43 H 1.09007 * 113.61127 * 105.39387 * 26 6 4 44 44 H 1.08994 * 113.61598 * 334.48633 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5865 0.0015 6 6 3.9208 2.9373 0.0000 7 1 3.4716 3.5809 -0.7564 8 6 3.9859 3.5809 1.3982 9 6 5.3561 4.1444 0.9859 10 9 6.3096 4.1032 2.0088 11 6 5.2763 5.5109 0.3025 12 16 5.1143 6.8076 1.5607 13 8 6.3130 6.9231 2.3149 14 8 3.8496 6.7236 2.2033 15 8 5.0461 8.1029 0.7645 16 6 3.8529 8.3103 0.1472 17 6 3.6437 7.8339 -1.1397 18 17 4.9062 6.9729 -1.9635 19 6 2.4308 8.0506 -1.7667 20 6 2.2042 7.5385 -3.1658 21 8 2.0117 6.1229 -3.1295 22 14 0.6919 8.3525 -3.8877 23 6 1.4236 8.7319 -1.1089 24 6 1.6281 9.2022 0.1753 25 6 2.8400 8.9930 0.8045 26 6 5.4583 2.9679 0.0013 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 1.8933 -0.5139 -0.8899 31 1 1.8932 -0.5138 0.8901 32 1 4.0383 2.8559 2.2105 33 1 3.2296 4.3485 1.5627 34 1 4.4104 5.5363 -0.3590 35 1 6.1828 5.6799 -0.2787 36 1 3.0719 7.7715 -3.7830 37 1 1.2549 5.8424 -2.5969 38 1 0.8666 9.8272 -3.9016 39 1 0.4572 7.8554 -5.2672 40 1 0.4753 8.8966 -1.5987 41 1 0.8393 9.7337 0.6870 42 1 2.9986 9.3604 1.8076 43 1 5.8904 3.2410 -0.9615 44 1 5.9124 2.0759 0.4326 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10544596_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:08:18 Heat of formation + Delta-G solvation = -198.364556 kcal Electronic energy + Delta-G solvation = -36915.505402 eV Core-core repulsion = 31677.080719 eV Total energy + Delta-G solvation = -5238.424683 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.062 amu Computer time = 2.30 seconds Orbital eigenvalues (eV) -48.99944 -42.58619 -41.84601 -40.19717 -39.61211 -38.42449 -38.10470 -37.74385 -37.48394 -37.29297 -33.02076 -32.82400 -31.96883 -31.60730 -27.48605 -27.36049 -27.10240 -25.12646 -24.08949 -23.62560 -22.44469 -21.73859 -20.50671 -19.83904 -19.41541 -19.10888 -18.77027 -18.36602 -18.03717 -17.85552 -17.62308 -17.22070 -17.02491 -16.83222 -16.50864 -16.24297 -16.06093 -15.82604 -15.64451 -15.44833 -15.02225 -14.82110 -14.73861 -14.49609 -14.35373 -14.26351 -13.88057 -13.77468 -13.71528 -13.57610 -13.39460 -13.38251 -13.32066 -13.23307 -13.06271 -12.84492 -12.69880 -12.60740 -12.54466 -12.43871 -12.20160 -12.09772 -11.92894 -11.55759 -11.50120 -11.41194 -10.80060 -10.45855 -10.29924 -5.28599 -1.37624 -0.53297 -0.43112 0.43947 0.73198 0.98546 1.07392 1.42396 1.53296 1.77066 1.86535 2.22714 2.50064 2.67684 2.71260 2.87232 2.88500 3.06145 3.19920 3.19972 3.34894 3.40622 3.47037 3.63082 3.71900 3.79199 3.88963 3.92925 3.95973 3.96693 4.11291 4.21671 4.26333 4.32819 4.36613 4.39518 4.44382 4.46000 4.59653 4.68241 4.69746 4.77503 4.77741 4.93400 4.98806 5.14236 5.40579 6.27594 6.67738 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.500 6.500 6 C -0.107 4.107 7 H 0.137 0.863 8 C -0.147 4.147 9 C 0.103 3.897 10 F -0.180 7.180 11 C -0.670 4.670 12 S 2.593 3.407 13 O -0.900 6.900 14 O -0.936 6.936 15 O -0.653 6.653 16 C 0.074 3.926 17 C -0.038 4.038 18 Cl -0.031 7.031 19 C -0.094 4.094 20 C -0.074 4.074 21 O -0.528 6.528 22 Si 0.691 3.309 23 C -0.084 4.084 24 C -0.085 4.085 25 C -0.070 4.070 26 C -0.120 4.120 27 H 0.081 0.919 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.116 0.884 33 H 0.111 0.889 34 H 0.161 0.839 35 H 0.157 0.843 36 H 0.122 0.878 37 H 0.381 0.619 38 H -0.251 1.251 39 H -0.248 1.248 40 H 0.152 0.848 41 H 0.156 0.844 42 H 0.156 0.844 43 H 0.098 0.902 44 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.392 2.000 -2.870 10.022 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.387 6.387 6 C -0.126 4.126 7 H 0.154 0.846 8 C -0.184 4.184 9 C 0.083 3.917 10 F -0.160 7.160 11 C -0.795 4.795 12 S 2.686 3.314 13 O -0.898 6.898 14 O -0.934 6.934 15 O -0.612 6.612 16 C 0.032 3.968 17 C -0.067 4.067 18 Cl -0.002 7.002 19 C -0.096 4.096 20 C -0.184 4.184 21 O -0.333 6.333 22 Si 0.591 3.409 23 C -0.103 4.103 24 C -0.103 4.103 25 C -0.090 4.090 26 C -0.159 4.159 27 H 0.100 0.900 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.134 0.866 33 H 0.129 0.871 34 H 0.179 0.821 35 H 0.175 0.825 36 H 0.139 0.861 37 H 0.228 0.772 38 H -0.176 1.176 39 H -0.172 1.172 40 H 0.169 0.831 41 H 0.174 0.826 42 H 0.174 0.826 43 H 0.117 0.883 44 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -8.685 2.551 -3.329 9.645 hybrid contribution 1.335 -0.633 -0.465 1.549 sum -7.350 1.918 -3.794 8.491 Atomic orbital electron populations 1.21822 0.92183 1.03321 1.03720 1.23121 0.95707 0.79654 1.02852 1.86499 1.23960 1.32921 1.83605 1.23124 0.80899 0.91741 0.72418 1.90706 1.60542 1.42684 1.44786 1.22321 0.97219 0.92203 1.00822 0.84552 1.23900 0.95824 1.02024 0.96675 1.21567 0.88932 0.93497 0.87689 1.93003 1.65823 1.97226 1.59972 1.31791 1.14715 1.13051 1.19945 1.05750 0.75451 0.74750 0.75459 1.93701 1.47599 1.83127 1.65412 1.93662 1.42897 1.84526 1.72353 1.85817 1.41624 1.61110 1.72637 1.17809 0.82427 1.05280 0.91313 1.21062 0.92241 1.01203 0.92238 1.98428 1.49930 1.73570 1.78228 1.20270 0.91807 0.99452 0.98043 1.25220 1.11392 0.87454 0.94371 1.86584 1.54045 1.18526 1.74179 0.94941 0.82642 0.79762 0.83555 1.21281 0.98299 0.95772 0.94901 1.21282 0.96704 0.98073 0.94243 1.21463 0.91388 0.95117 1.01055 1.23583 0.93667 0.97976 1.00635 0.89989 0.91273 0.91292 0.91015 0.91021 0.86572 0.87075 0.82146 0.82474 0.86083 0.77188 1.17571 1.17208 0.83113 0.82631 0.82603 0.88331 0.86119 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.38 10.29 37.15 0.38 0.76 16 2 C 0.06 -0.02 6.19 37.15 0.23 0.21 16 3 O -0.35 -0.26 10.22 -39.23 -0.40 -0.66 16 4 C 0.48 0.68 7.49 36.01 0.27 0.95 16 5 O -0.50 -2.19 15.65 -18.75 -0.29 -2.48 16 6 C -0.11 0.11 3.91 -90.81 -0.36 -0.24 16 7 H 0.14 -0.48 7.64 -51.93 -0.40 -0.88 16 8 C -0.15 0.10 7.11 -25.77 -0.18 -0.08 16 9 C 0.10 0.05 1.76 -89.82 -0.16 -0.11 16 10 F -0.18 -0.62 16.37 2.25 0.04 -0.58 16 11 C -0.67 0.30 3.57 37.16 0.13 0.44 16 12 S 2.59 6.21 4.91 -107.50 -0.53 5.68 16 13 O -0.90 -5.67 17.56 -67.04 -1.18 -6.85 16 14 O -0.94 -2.46 15.50 -67.03 -1.04 -3.50 16 15 O -0.65 -1.12 9.59 -51.84 -0.50 -1.62 16 16 C 0.07 0.01 4.80 -39.19 -0.19 -0.18 16 17 C -0.04 0.04 5.61 -39.36 -0.22 -0.18 16 18 Cl -0.03 0.02 22.25 -51.86 -1.15 -1.13 16 19 C -0.09 0.27 5.26 -104.61 -0.55 -0.28 16 20 C -0.07 0.24 2.09 36.01 0.08 0.31 16 21 O -0.53 1.79 12.81 -35.23 -0.45 1.34 16 22 Si 0.69 -2.83 29.91 -169.99 -5.08 -7.91 16 23 C -0.08 0.40 8.66 -39.56 -0.34 0.06 16 24 C -0.08 0.37 10.04 -39.60 -0.40 -0.02 16 25 C -0.07 0.12 9.05 -39.44 -0.36 -0.24 16 26 C -0.12 0.05 6.88 -25.94 -0.18 -0.13 16 27 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 28 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 31 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 32 H 0.12 -0.08 8.10 -51.93 -0.42 -0.50 16 33 H 0.11 -0.21 7.32 -51.93 -0.38 -0.59 16 34 H 0.16 -0.42 4.70 -51.92 -0.24 -0.67 16 35 H 0.16 -0.28 7.23 -51.92 -0.38 -0.66 16 36 H 0.12 -0.26 7.42 -51.93 -0.39 -0.64 16 37 H 0.38 -2.83 8.70 45.56 0.40 -2.44 16 38 H -0.25 0.41 7.11 56.52 0.40 0.82 16 39 H -0.25 0.10 7.11 56.52 0.40 0.50 16 40 H 0.15 -1.18 5.12 -52.49 -0.27 -1.45 16 41 H 0.16 -1.14 8.06 -52.48 -0.42 -1.56 16 42 H 0.16 -0.43 8.06 -52.49 -0.42 -0.86 16 43 H 0.10 -0.19 8.10 -51.92 -0.42 -0.61 16 44 H 0.12 0.09 7.44 -51.93 -0.39 -0.30 16 LS Contribution 390.29 15.07 5.88 5.88 Total: 0.00 -11.60 390.29 -11.59 -23.19 By element: Atomic # 1 Polarization: -7.57 SS G_CDS: -5.04 Total: -12.61 kcal Atomic # 6 Polarization: 3.11 SS G_CDS: -1.84 Total: 1.26 kcal Atomic # 8 Polarization: -9.92 SS G_CDS: -3.86 Total: -13.78 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.04 Total: -0.58 kcal Atomic # 14 Polarization: -2.83 SS G_CDS: -5.08 Total: -7.91 kcal Atomic # 16 Polarization: 6.21 SS G_CDS: -0.53 Total: 5.68 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -1.15 Total: -1.13 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -11.60 -11.59 -23.19 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10544596_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -175.175 kcal (2) G-P(sol) polarization free energy of solvation -11.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.778 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.189 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.365 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.31 seconds