Wall clock time and date at job start Mon Mar 8 2021 10:08:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45202 * 109.47563 * 2 1 4 4 C 1.34221 * 117.00212 * 179.97438 * 3 2 1 5 5 O 1.20828 * 120.00137 * 359.97438 * 4 3 2 6 6 C 1.50699 * 120.00048 * 179.97438 * 4 3 2 7 7 H 1.08997 * 112.85195 * 311.19921 * 6 4 3 8 8 C 1.54055 * 113.69333 * 82.46730 * 6 4 3 9 9 C 1.53785 * 86.98685 * 139.99133 * 8 6 4 10 10 F 1.39900 * 113.61268 * 219.98118 * 9 8 6 11 11 C 1.52998 * 113.61473 * 89.15923 * 9 8 6 12 12 S 1.81404 * 109.46991 * 80.86693 * 11 9 8 13 13 O 1.42100 * 110.54055 * 68.37128 * 12 11 9 14 14 O 1.42101 * 110.54189 * 291.62522 * 12 11 9 15 15 O 1.52199 * 104.45068 * 179.97438 * 12 11 9 16 16 C 1.35927 * 113.99712 * 75.00003 * 15 12 11 17 17 C 1.38816 * 120.05996 * 270.29245 * 16 15 12 18 18 Cl 1.73605 * 120.03807 * 359.97438 * 17 16 15 19 19 C 1.38250 * 119.92549 * 180.23604 * 17 16 15 20 20 C 1.50699 * 119.98141 * 179.76912 * 19 17 16 21 21 O 1.42907 * 109.46603 * 74.72774 * 20 19 17 22 22 Si 1.86298 * 109.47032 * 194.72077 * 20 19 17 23 23 C 1.38257 * 120.04035 * 359.49562 * 19 17 16 24 24 C 1.38275 * 120.11509 * 0.22836 * 23 19 17 25 25 C 1.38149 * 120.08224 * 0.02880 * 24 23 19 26 26 C 1.53782 * 113.61558 * 179.97438 * 6 4 3 27 27 H 1.09002 * 109.47591 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47231 * 300.00558 * 1 2 3 29 29 H 1.09005 * 109.46701 * 60.00270 * 1 2 3 30 30 H 1.08996 * 109.47231 * 239.99442 * 2 1 3 31 31 H 1.09005 * 109.46701 * 119.99730 * 2 1 3 32 32 H 1.09003 * 113.61042 * 25.48549 * 8 6 4 33 33 H 1.09003 * 113.69524 * 254.50763 * 8 6 4 34 34 H 1.09000 * 109.47142 * 320.87114 * 11 9 8 35 35 H 1.08999 * 109.47016 * 200.86311 * 11 9 8 36 36 H 1.08996 * 109.47117 * 314.72687 * 20 19 17 37 37 H 0.96697 * 114.00527 * 59.99993 * 21 20 19 38 38 H 1.48506 * 109.99834 * 58.68765 * 22 20 19 39 39 H 1.48502 * 110.00011 * 180.02562 * 22 20 19 40 40 H 1.07991 * 119.93754 * 180.25780 * 23 19 17 41 41 H 1.08005 * 119.95725 * 180.02562 * 24 23 19 42 42 H 1.08000 * 120.02388 * 180.02562 * 25 24 23 43 43 H 1.09007 * 113.61127 * 105.39387 * 26 6 4 44 44 H 1.08994 * 113.61598 * 334.48633 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5865 0.0015 6 6 3.9208 2.9373 0.0000 7 1 3.4716 3.5809 -0.7564 8 6 3.9859 3.5809 1.3982 9 6 5.3561 4.1444 0.9859 10 9 6.3096 4.1032 2.0088 11 6 5.2763 5.5109 0.3025 12 16 5.1143 6.8076 1.5607 13 8 6.3130 6.9231 2.3149 14 8 3.8496 6.7236 2.2033 15 8 5.0461 8.1029 0.7645 16 6 3.8529 8.3103 0.1472 17 6 3.6437 7.8339 -1.1397 18 17 4.9062 6.9729 -1.9635 19 6 2.4308 8.0506 -1.7667 20 6 2.2042 7.5385 -3.1658 21 8 2.0117 6.1229 -3.1295 22 14 0.6919 8.3525 -3.8877 23 6 1.4236 8.7319 -1.1089 24 6 1.6281 9.2022 0.1753 25 6 2.8400 8.9930 0.8045 26 6 5.4583 2.9679 0.0013 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 1.8933 -0.5139 -0.8899 31 1 1.8932 -0.5138 0.8901 32 1 4.0383 2.8559 2.2105 33 1 3.2296 4.3485 1.5627 34 1 4.4104 5.5363 -0.3590 35 1 6.1828 5.6799 -0.2787 36 1 3.0719 7.7715 -3.7830 37 1 1.2549 5.8424 -2.5969 38 1 0.8666 9.8272 -3.9016 39 1 0.4572 7.8554 -5.2672 40 1 0.4753 8.8966 -1.5987 41 1 0.8393 9.7337 0.6870 42 1 2.9986 9.3604 1.8076 43 1 5.8904 3.2410 -0.9615 44 1 5.9124 2.0759 0.4326 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_10544596_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:08:17 Heat of formation + Delta-G solvation = -199.863167 kcal Electronic energy + Delta-G solvation = -36915.570386 eV Core-core repulsion = 31677.080719 eV Total energy + Delta-G solvation = -5238.489667 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.062 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -49.15780 -42.50672 -41.92638 -40.02155 -39.62287 -38.62455 -37.97233 -37.61115 -37.51739 -37.43040 -32.77066 -32.73489 -31.83388 -31.51650 -27.40812 -27.25210 -26.99330 -24.99018 -24.01038 -23.38548 -22.48603 -21.71277 -20.50570 -19.88292 -19.44497 -19.07679 -18.73441 -18.27925 -18.04338 -17.75010 -17.57939 -17.15471 -16.99320 -16.87200 -16.38015 -16.26038 -16.04099 -15.63803 -15.51797 -15.34077 -14.97821 -14.80331 -14.64330 -14.51282 -14.37470 -14.13831 -13.85128 -13.69149 -13.63610 -13.60841 -13.52645 -13.39053 -13.24223 -13.15496 -12.99963 -12.81073 -12.57100 -12.52617 -12.47480 -12.30801 -12.12447 -12.04976 -11.76989 -11.55675 -11.50901 -11.50198 -10.50256 -10.24312 -10.07828 -4.97679 -1.42987 -0.33517 -0.20738 0.56518 0.75434 0.97834 1.27221 1.53207 1.71234 2.04976 2.13904 2.14904 2.48546 2.63677 2.68522 2.88746 3.07767 3.10221 3.22129 3.48931 3.58628 3.66295 3.72678 3.76818 3.83298 3.99179 4.01751 4.02317 4.06533 4.16884 4.23892 4.34481 4.36862 4.40608 4.42161 4.54543 4.63981 4.66374 4.73193 4.85451 4.94112 4.95824 5.01313 5.07687 5.15705 5.41587 5.46032 6.59465 6.83426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.352 6.352 4 C 0.476 3.524 5 O -0.535 6.535 6 C -0.097 4.097 7 H 0.168 0.832 8 C -0.148 4.148 9 C 0.091 3.909 10 F -0.201 7.201 11 C -0.656 4.656 12 S 2.593 3.407 13 O -0.954 6.954 14 O -0.945 6.945 15 O -0.660 6.660 16 C 0.042 3.958 17 C -0.049 4.049 18 Cl -0.042 7.042 19 C -0.095 4.095 20 C -0.081 4.081 21 O -0.541 6.541 22 Si 0.792 3.208 23 C -0.072 4.072 24 C -0.074 4.074 25 C -0.086 4.086 26 C -0.121 4.121 27 H 0.093 0.907 28 H 0.070 0.930 29 H 0.073 0.927 30 H 0.068 0.932 31 H 0.065 0.935 32 H 0.112 0.888 33 H 0.125 0.875 34 H 0.185 0.815 35 H 0.169 0.831 36 H 0.107 0.893 37 H 0.399 0.601 38 H -0.280 1.280 39 H -0.302 1.302 40 H 0.187 0.813 41 H 0.191 0.809 42 H 0.158 0.842 43 H 0.116 0.884 44 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.103 2.657 -3.834 12.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.268 6.268 4 C 0.320 3.680 5 O -0.425 6.425 6 C -0.115 4.115 7 H 0.185 0.815 8 C -0.186 4.186 9 C 0.071 3.929 10 F -0.181 7.181 11 C -0.783 4.783 12 S 2.690 3.310 13 O -0.952 6.952 14 O -0.944 6.944 15 O -0.619 6.619 16 C 0.000 4.000 17 C -0.078 4.078 18 Cl -0.013 7.013 19 C -0.097 4.097 20 C -0.190 4.190 21 O -0.349 6.349 22 Si 0.696 3.304 23 C -0.090 4.090 24 C -0.092 4.092 25 C -0.106 4.106 26 C -0.159 4.159 27 H 0.112 0.888 28 H 0.089 0.911 29 H 0.092 0.908 30 H 0.087 0.913 31 H 0.084 0.916 32 H 0.130 0.870 33 H 0.144 0.856 34 H 0.202 0.798 35 H 0.187 0.813 36 H 0.125 0.875 37 H 0.250 0.750 38 H -0.207 1.207 39 H -0.230 1.230 40 H 0.204 0.796 41 H 0.208 0.792 42 H 0.176 0.824 43 H 0.134 0.866 44 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -11.404 3.213 -4.229 12.580 hybrid contribution 2.083 -0.832 -0.279 2.260 sum -9.321 2.381 -4.508 10.624 Atomic orbital electron populations 1.21824 0.90367 1.04237 1.04036 1.23296 0.97150 0.79186 1.02462 1.86507 1.23542 1.33541 1.83201 1.23576 0.80886 0.92234 0.71263 1.90694 1.61273 1.44003 1.46532 1.22429 0.96592 0.91200 1.01315 0.81486 1.23959 0.95411 1.02272 0.96912 1.21858 0.89158 0.94191 0.87678 1.92961 1.66779 1.97346 1.61063 1.31721 1.16492 1.11074 1.19033 1.05550 0.74365 0.75220 0.75896 1.93634 1.49431 1.84303 1.67828 1.93624 1.42609 1.84866 1.73281 1.85790 1.42781 1.60624 1.72738 1.18209 0.82432 1.07264 0.92091 1.21185 0.92691 1.01891 0.92044 1.98416 1.50694 1.73844 1.78310 1.20448 0.91550 0.99559 0.98116 1.25357 1.11579 0.87978 0.94123 1.86553 1.55382 1.18182 1.74785 0.93924 0.80051 0.76277 0.80144 1.21705 0.98908 0.93770 0.94597 1.21716 0.96211 0.97000 0.94240 1.21769 0.92124 0.95202 1.01554 1.23586 0.94437 0.96880 1.01040 0.88798 0.91091 0.90763 0.91326 0.91619 0.86976 0.85646 0.79755 0.81309 0.87529 0.75025 1.20654 1.22991 0.79637 0.79189 0.82430 0.86595 0.87575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.85 10.29 71.98 0.74 1.59 16 2 C 0.05 -0.04 6.19 71.98 0.45 0.41 16 3 O -0.35 -0.39 10.22 -51.33 -0.52 -0.92 16 4 C 0.48 1.42 7.49 71.24 0.53 1.95 16 5 O -0.54 -5.24 15.65 21.96 0.34 -4.90 16 6 C -0.10 0.26 3.91 -10.92 -0.04 0.22 16 7 H 0.17 -1.53 7.64 -2.39 -0.02 -1.55 16 8 C -0.15 0.18 7.11 31.22 0.22 0.40 16 9 C 0.09 0.16 1.76 -10.28 -0.02 0.14 16 10 F -0.20 -1.79 16.37 44.97 0.74 -1.06 16 11 C -0.66 0.32 3.57 71.98 0.26 0.58 16 12 S 2.59 16.30 4.91 -56.49 -0.28 16.02 16 13 O -0.95 -14.70 17.56 -118.57 -2.08 -16.78 16 14 O -0.95 -5.87 15.50 -118.57 -1.84 -7.71 16 15 O -0.66 -3.20 9.59 -61.82 -0.59 -3.79 16 16 C 0.04 0.01 4.80 22.52 0.11 0.12 16 17 C -0.05 0.12 5.61 22.41 0.13 0.24 16 18 Cl -0.04 0.06 22.25 -2.72 -0.06 0.00 16 19 C -0.10 0.71 5.26 -19.86 -0.10 0.61 16 20 C -0.08 0.63 2.09 71.24 0.15 0.78 16 21 O -0.54 4.62 12.81 -148.98 -1.91 2.71 16 22 Si 0.79 -7.79 29.91 68.60 2.05 -5.73 16 23 C -0.07 0.90 8.66 22.28 0.19 1.09 16 24 C -0.07 0.85 10.04 22.26 0.22 1.07 16 25 C -0.09 0.36 9.05 22.36 0.20 0.56 16 26 C -0.12 0.06 6.88 31.11 0.21 0.27 16 27 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 28 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 29 H 0.07 -0.48 8.14 -2.38 -0.02 -0.50 16 30 H 0.07 -0.01 8.13 -2.39 -0.02 -0.03 16 31 H 0.07 0.02 8.13 -2.38 -0.02 0.00 16 32 H 0.11 -0.05 8.10 -2.39 -0.02 -0.07 16 33 H 0.13 -0.53 7.32 -2.39 -0.02 -0.55 16 34 H 0.19 -1.09 4.70 -2.39 -0.01 -1.10 16 35 H 0.17 -0.49 7.23 -2.39 -0.02 -0.51 16 36 H 0.11 -0.50 7.42 -2.39 -0.02 -0.52 16 37 H 0.40 -6.99 8.70 -74.06 -0.64 -7.64 16 38 H -0.28 1.39 7.11 99.48 0.71 2.10 16 39 H -0.30 0.21 7.11 99.48 0.71 0.91 16 40 H 0.19 -3.71 5.12 -2.92 -0.01 -3.73 16 41 H 0.19 -3.53 8.06 -2.91 -0.02 -3.55 16 42 H 0.16 -0.84 8.06 -2.91 -0.02 -0.87 16 43 H 0.12 -0.49 8.10 -2.38 -0.02 -0.51 16 44 H 0.11 0.31 7.44 -2.39 -0.02 0.29 16 Total: 0.00 -30.70 390.29 -0.43 -31.14 By element: Atomic # 1 Polarization: -19.49 SS G_CDS: 0.47 Total: -19.02 kcal Atomic # 6 Polarization: 6.78 SS G_CDS: 3.25 Total: 10.03 kcal Atomic # 8 Polarization: -24.78 SS G_CDS: -6.60 Total: -31.38 kcal Atomic # 9 Polarization: -1.79 SS G_CDS: 0.74 Total: -1.06 kcal Atomic # 14 Polarization: -7.79 SS G_CDS: 2.05 Total: -5.73 kcal Atomic # 16 Polarization: 16.30 SS G_CDS: -0.28 Total: 16.02 kcal Atomic # 17 Polarization: 0.06 SS G_CDS: -0.06 Total: 0.00 kcal Total: -30.70 -0.43 -31.14 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10544596_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.728 kcal (2) G-P(sol) polarization free energy of solvation -30.704 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -199.432 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.432 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.135 kcal (6) G-S(sol) free energy of system = (1) + (5) -199.863 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds