Wall clock time and date at job start Mon Mar 8 2021 10:26:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45199 * 109.47221 * 2 1 4 4 C 1.34225 * 116.99893 * 180.02562 * 3 2 1 5 5 O 1.20822 * 120.00620 * 359.97438 * 4 3 2 6 6 C 1.50704 * 119.99715 * 179.97438 * 4 3 2 7 7 H 1.08998 * 109.47530 * 300.00019 * 6 4 3 8 8 C 1.53001 * 109.47170 * 60.00074 * 6 4 3 9 9 C 1.52997 * 109.47367 * 179.97438 * 8 6 4 10 10 C 1.53005 * 109.47154 * 300.00009 * 9 8 6 11 11 F 1.39901 * 109.46945 * 179.97438 * 10 9 8 12 12 C 1.52993 * 109.46959 * 299.99712 * 10 9 8 13 13 S 1.81400 * 109.47386 * 305.00071 * 12 10 9 14 14 O 1.42097 * 110.54373 * 68.37483 * 13 12 10 15 15 O 1.42104 * 110.54084 * 291.62551 * 13 12 10 16 16 O 1.52196 * 104.45129 * 179.97438 * 13 12 10 17 17 C 1.35930 * 114.00004 * 75.00091 * 16 13 12 18 18 C 1.38815 * 120.05926 * 90.00085 * 17 16 13 19 19 Cl 1.73599 * 120.03810 * 359.97438 * 18 17 16 20 20 C 1.38256 * 119.91843 * 180.25569 * 18 17 16 21 21 C 1.50704 * 119.97541 * 179.71656 * 20 18 17 22 22 O 1.42905 * 109.46636 * 75.00217 * 21 20 18 23 23 Si 1.86304 * 109.47077 * 194.99959 * 21 20 18 24 24 C 1.38249 * 120.04395 * 359.44600 * 20 18 17 25 25 C 1.38275 * 120.12075 * 0.55270 * 24 20 18 26 26 C 1.38154 * 120.07440 * 359.72612 * 25 24 20 27 27 C 1.53001 * 109.46991 * 59.99760 * 10 9 8 28 28 C 1.52997 * 109.47367 * 300.00109 * 27 10 9 29 29 H 1.09003 * 109.46579 * 300.00304 * 1 2 3 30 30 H 1.08999 * 109.47038 * 59.99824 * 1 2 3 31 31 H 1.08991 * 109.46896 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47052 * 239.99804 * 2 1 3 33 33 H 1.08997 * 109.46673 * 119.99780 * 2 1 3 34 34 H 1.09000 * 109.46841 * 300.00123 * 8 6 4 35 35 H 1.08997 * 109.47439 * 59.99421 * 8 6 4 36 36 H 1.08996 * 109.47594 * 179.97438 * 9 8 6 37 37 H 1.09011 * 109.46887 * 60.00027 * 9 8 6 38 38 H 1.08999 * 109.47203 * 184.99762 * 12 10 9 39 39 H 1.09008 * 109.47231 * 65.00007 * 12 10 9 40 40 H 1.08991 * 109.47393 * 315.00324 * 21 20 18 41 41 H 0.96698 * 113.99854 * 60.00104 * 22 21 20 42 42 H 1.48504 * 109.99722 * 58.68626 * 23 21 20 43 43 H 1.48500 * 109.99891 * 180.02562 * 23 21 20 44 44 H 1.07998 * 119.93718 * 180.25542 * 24 20 18 45 45 H 1.07996 * 119.96849 * 179.74878 * 25 24 20 46 46 H 1.08003 * 120.02595 * 180.02562 * 26 25 24 47 47 H 1.08998 * 109.46939 * 60.00230 * 27 10 9 48 48 H 1.09000 * 109.46841 * 179.97438 * 27 10 9 49 49 H 1.08996 * 109.47594 * 180.02562 * 28 27 10 50 50 H 1.08997 * 109.47072 * 300.00507 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9208 2.9374 -0.0012 7 1 3.5845 3.4693 -0.8911 8 6 3.4497 3.6847 1.2481 9 6 4.0349 5.0983 1.2478 10 6 5.5629 5.0177 1.2476 11 9 6.0980 6.3104 1.2467 12 6 6.0343 4.2709 2.4968 13 16 5.3525 5.0728 3.9742 14 8 3.9444 4.8919 4.0348 15 8 5.9349 6.3558 4.1588 16 8 5.8868 4.2468 5.1355 17 6 7.2000 4.4645 5.4107 18 6 7.5666 5.4519 6.3150 19 17 6.3482 6.4110 7.0956 20 6 8.9034 5.6743 6.5888 21 6 9.3030 6.7502 7.5654 22 8 9.0378 6.3064 8.8977 23 14 11.1215 7.1114 7.3817 24 6 9.8734 4.9067 5.9714 25 6 9.5103 3.9227 5.0704 26 6 8.1762 3.7001 4.7888 27 6 6.0340 4.2704 -0.0016 28 6 5.4487 2.8568 -0.0014 29 1 -0.3632 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 1.8934 -0.5139 -0.8900 33 1 1.8933 -0.5138 0.8900 34 1 2.3612 3.7417 1.2484 35 1 3.7858 3.1528 2.1381 36 1 3.6990 5.6309 2.1375 37 1 3.6990 5.6305 0.3577 38 1 7.1232 4.2904 2.5426 39 1 5.6910 3.2372 2.4534 40 1 8.7306 7.6554 7.3633 41 1 9.5149 5.5031 9.1470 42 1 11.4155 7.5433 5.9916 43 1 11.5283 8.1704 8.3399 44 1 10.9169 5.0792 6.1896 45 1 10.2702 3.3273 4.5864 46 1 7.8934 2.9310 4.0852 47 1 5.6981 4.8026 -0.8916 48 1 7.1225 4.2134 -0.0020 49 1 5.7846 2.3242 -0.8910 50 1 5.7845 2.3247 0.8887 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10544596_16464696.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:26:14 Heat of formation + Delta-G solvation = -238.094975 kcal Electronic energy + Delta-G solvation = -41171.826519 eV Core-core repulsion = 35620.603758 eV Total energy + Delta-G solvation = -5551.222761 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.093 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -49.05718 -42.49709 -41.84889 -40.09293 -39.72851 -38.36074 -37.68234 -37.61557 -37.56121 -37.24570 -33.68831 -32.94513 -32.56689 -32.25574 -31.73469 -29.42792 -27.23605 -25.47957 -25.06167 -24.35000 -23.74041 -23.46536 -21.95711 -21.73020 -20.61914 -19.57556 -19.21157 -18.81647 -18.74789 -18.23815 -18.09810 -17.91795 -17.65966 -17.38581 -17.16960 -16.81918 -16.45059 -16.19261 -16.04910 -15.69162 -15.51421 -15.46657 -15.14884 -15.08377 -14.64699 -14.59379 -14.56500 -14.29643 -14.19788 -13.99653 -13.85292 -13.75182 -13.65260 -13.50831 -13.34482 -13.26712 -13.22010 -13.09062 -12.93363 -12.92758 -12.83119 -12.67843 -12.57803 -12.44753 -12.42653 -12.12168 -12.01851 -11.81113 -11.75183 -11.54300 -11.38079 -11.28189 -10.62876 -10.41959 -10.07412 -5.18847 -1.32737 -0.42372 -0.34756 0.72297 0.94448 1.11235 1.11734 1.53485 1.55826 1.88351 1.93182 2.27993 2.62931 2.72996 2.94018 2.97808 3.04983 3.17908 3.28319 3.35258 3.43388 3.48919 3.52638 3.56336 3.64704 3.73848 3.80195 3.84849 3.92724 3.96492 3.99017 4.02784 4.04039 4.08680 4.25887 4.32084 4.36066 4.43664 4.45914 4.50316 4.61359 4.66111 4.69558 4.71928 4.73815 4.78213 4.79237 4.79644 4.92673 4.99540 5.02170 5.19640 5.42368 6.45230 6.67776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.467 3.533 5 O -0.505 6.505 6 C -0.087 4.087 7 H 0.119 0.881 8 C -0.109 4.109 9 C -0.171 4.171 10 C 0.141 3.859 11 F -0.189 7.189 12 C -0.695 4.695 13 S 2.586 3.414 14 O -0.909 6.909 15 O -0.924 6.924 16 O -0.655 6.655 17 C 0.069 3.931 18 C 0.011 3.989 19 Cl -0.019 7.019 20 C -0.098 4.098 21 C -0.077 4.077 22 O -0.527 6.527 23 Si 0.692 3.308 24 C -0.083 4.083 25 C -0.091 4.091 26 C -0.116 4.116 27 C -0.128 4.128 28 C -0.108 4.108 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.100 0.900 35 H 0.073 0.927 36 H 0.094 0.906 37 H 0.104 0.896 38 H 0.151 0.849 39 H 0.160 0.840 40 H 0.123 0.877 41 H 0.379 0.621 42 H -0.250 1.250 43 H -0.247 1.247 44 H 0.151 0.849 45 H 0.155 0.845 46 H 0.153 0.847 47 H 0.091 0.909 48 H 0.090 0.910 49 H 0.089 0.911 50 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.982 -4.967 -2.733 7.548 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.309 3.691 5 O -0.393 6.393 6 C -0.106 4.106 7 H 0.137 0.863 8 C -0.146 4.146 9 C -0.209 4.209 10 C 0.122 3.878 11 F -0.170 7.170 12 C -0.820 4.820 13 S 2.679 3.321 14 O -0.907 6.907 15 O -0.922 6.922 16 O -0.613 6.613 17 C 0.026 3.974 18 C -0.019 4.019 19 Cl 0.011 6.989 20 C -0.099 4.099 21 C -0.187 4.187 22 O -0.332 6.332 23 Si 0.591 3.409 24 C -0.102 4.102 25 C -0.109 4.109 26 C -0.136 4.136 27 C -0.166 4.166 28 C -0.145 4.145 29 H 0.088 0.912 30 H 0.087 0.913 31 H 0.100 0.900 32 H 0.089 0.911 33 H 0.090 0.910 34 H 0.118 0.882 35 H 0.092 0.908 36 H 0.112 0.888 37 H 0.123 0.877 38 H 0.169 0.831 39 H 0.178 0.822 40 H 0.140 0.860 41 H 0.226 0.774 42 H -0.175 1.175 43 H -0.172 1.172 44 H 0.169 0.831 45 H 0.172 0.828 46 H 0.170 0.830 47 H 0.110 0.890 48 H 0.108 0.892 49 H 0.107 0.893 50 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 4.769 -3.722 -2.338 6.486 hybrid contribution -0.687 -0.439 -0.671 1.056 sum 4.082 -4.161 -3.009 6.560 Atomic orbital electron populations 1.21829 0.92233 1.03313 1.03768 1.23107 0.95708 0.79698 1.02764 1.86508 1.24158 1.32881 1.83588 1.23579 0.80872 0.92329 0.72288 1.90686 1.60477 1.43039 1.45087 1.21246 0.96535 0.90387 1.02475 0.86316 1.21526 1.03271 0.93736 0.96083 1.22633 0.91934 0.99493 1.06816 1.20415 0.94089 0.78894 0.94414 1.93002 1.87682 1.38857 1.97412 1.31708 1.15573 1.15757 1.18915 1.05987 0.75815 0.74907 0.75378 1.93674 1.27139 1.85369 1.84515 1.93721 1.78018 1.38495 1.81974 1.85775 1.31052 1.78397 1.66083 1.17804 0.78195 0.99353 1.02032 1.20988 0.91545 0.93722 0.95645 1.98441 1.53044 1.69253 1.78183 1.20359 0.90684 0.99246 0.99618 1.25281 1.13481 0.97071 0.82823 1.86609 1.72246 1.47953 1.26351 0.95154 0.75965 0.88064 0.81682 1.21260 0.99212 0.94402 0.95287 1.21156 0.95119 0.97482 0.97105 1.21436 0.92515 0.98994 1.00668 1.22062 1.02573 0.95697 0.96294 1.21526 0.91831 0.96230 1.04923 0.91243 0.91330 0.89973 0.91063 0.91037 0.88179 0.90813 0.88790 0.87713 0.83095 0.82224 0.85957 0.77390 1.17480 1.17174 0.83145 0.82768 0.82976 0.89023 0.89155 0.89257 0.90270 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.35 -0.41 10.12 -39.24 -0.40 -0.81 16 4 C 0.47 0.55 7.25 36.01 0.26 0.82 16 5 O -0.51 -1.84 15.73 -18.75 -0.29 -2.14 16 6 C -0.09 0.13 2.63 -91.77 -0.24 -0.11 16 7 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 8 C -0.11 0.10 4.56 -26.73 -0.12 -0.03 16 9 C -0.17 0.08 4.61 -26.73 -0.12 -0.04 16 10 C 0.14 -0.08 1.11 -90.62 -0.10 -0.18 16 11 F -0.19 -0.37 16.37 2.25 0.04 -0.34 16 12 C -0.69 0.91 4.07 37.15 0.15 1.06 16 13 S 2.59 7.45 4.39 -107.50 -0.47 6.98 16 14 O -0.91 -4.42 14.90 -67.04 -1.00 -5.42 16 15 O -0.92 -4.87 14.88 -67.03 -1.00 -5.87 16 16 O -0.65 -1.73 9.51 -51.85 -0.49 -2.22 16 17 C 0.07 0.11 4.79 -39.19 -0.19 -0.08 16 18 C 0.01 0.03 5.65 -39.36 -0.22 -0.19 16 19 Cl -0.02 -0.09 25.90 -51.86 -1.34 -1.43 16 20 C -0.10 0.01 5.26 -104.61 -0.55 -0.54 16 21 C -0.08 0.02 2.09 36.01 0.08 0.10 16 22 O -0.53 0.11 12.83 -35.23 -0.45 -0.34 16 23 Si 0.69 -1.59 29.92 -169.99 -5.09 -6.68 16 24 C -0.08 0.27 8.66 -39.56 -0.34 -0.07 16 25 C -0.09 0.37 10.04 -39.60 -0.40 -0.03 16 26 C -0.12 0.26 8.46 -39.44 -0.33 -0.07 16 27 C -0.13 0.34 5.19 -26.73 -0.14 0.20 16 28 C -0.11 0.25 4.22 -26.73 -0.11 0.13 16 29 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 33 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 34 H 0.10 -0.11 8.11 -51.93 -0.42 -0.54 16 35 H 0.07 -0.05 6.05 -51.93 -0.31 -0.36 16 36 H 0.09 0.10 5.40 -51.93 -0.28 -0.18 16 37 H 0.10 -0.24 8.14 -51.92 -0.42 -0.67 16 38 H 0.15 -0.57 6.61 -51.92 -0.34 -0.92 16 39 H 0.16 -0.56 4.83 -51.92 -0.25 -0.81 16 40 H 0.12 0.16 7.41 -51.93 -0.38 -0.23 16 41 H 0.38 -1.79 8.70 45.56 0.40 -1.39 16 42 H -0.25 0.02 7.11 56.52 0.40 0.42 16 43 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 44 H 0.15 -0.98 5.13 -52.49 -0.27 -1.25 16 45 H 0.15 -1.14 8.06 -52.49 -0.42 -1.56 16 46 H 0.15 -0.83 7.50 -52.48 -0.39 -1.22 16 47 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 48 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 49 H 0.09 -0.20 8.10 -51.93 -0.42 -0.62 16 50 H 0.08 -0.19 6.28 -51.93 -0.33 -0.52 16 LS Contribution 419.27 15.07 6.32 6.32 Total: 0.00 -12.34 419.27 -12.38 -24.73 By element: Atomic # 1 Polarization: -8.20 SS G_CDS: -6.43 Total: -14.63 kcal Atomic # 6 Polarization: 3.62 SS G_CDS: -1.77 Total: 1.84 kcal Atomic # 8 Polarization: -13.16 SS G_CDS: -3.63 Total: -16.79 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.09 Total: -6.68 kcal Atomic # 16 Polarization: 7.45 SS G_CDS: -0.47 Total: 6.98 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.34 Total: -1.43 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -12.34 -12.38 -24.73 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10544596_16464696.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -213.367 kcal (2) G-P(sol) polarization free energy of solvation -12.344 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -225.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.728 kcal (6) G-S(sol) free energy of system = (1) + (5) -238.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds