Wall clock time and date at job start Mon Mar 8 2021 10:26:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45199 * 109.47221 * 2 1 4 4 C 1.34225 * 116.99893 * 180.02562 * 3 2 1 5 5 O 1.20822 * 120.00620 * 359.97438 * 4 3 2 6 6 C 1.50704 * 119.99715 * 179.97438 * 4 3 2 7 7 H 1.08998 * 109.47530 * 300.00019 * 6 4 3 8 8 C 1.53001 * 109.47170 * 60.00074 * 6 4 3 9 9 C 1.52997 * 109.47367 * 179.97438 * 8 6 4 10 10 C 1.53005 * 109.47154 * 300.00009 * 9 8 6 11 11 F 1.39901 * 109.46945 * 179.97438 * 10 9 8 12 12 C 1.52993 * 109.46959 * 299.99712 * 10 9 8 13 13 S 1.81400 * 109.47386 * 305.00071 * 12 10 9 14 14 O 1.42097 * 110.54373 * 68.37483 * 13 12 10 15 15 O 1.42104 * 110.54084 * 291.62551 * 13 12 10 16 16 O 1.52196 * 104.45129 * 179.97438 * 13 12 10 17 17 C 1.35930 * 114.00004 * 75.00091 * 16 13 12 18 18 C 1.38815 * 120.05926 * 90.00085 * 17 16 13 19 19 Cl 1.73599 * 120.03810 * 359.97438 * 18 17 16 20 20 C 1.38256 * 119.91843 * 180.25569 * 18 17 16 21 21 C 1.50704 * 119.97541 * 179.71656 * 20 18 17 22 22 O 1.42905 * 109.46636 * 75.00217 * 21 20 18 23 23 Si 1.86304 * 109.47077 * 194.99959 * 21 20 18 24 24 C 1.38249 * 120.04395 * 359.44600 * 20 18 17 25 25 C 1.38275 * 120.12075 * 0.55270 * 24 20 18 26 26 C 1.38154 * 120.07440 * 359.72612 * 25 24 20 27 27 C 1.53001 * 109.46991 * 59.99760 * 10 9 8 28 28 C 1.52997 * 109.47367 * 300.00109 * 27 10 9 29 29 H 1.09003 * 109.46579 * 300.00304 * 1 2 3 30 30 H 1.08999 * 109.47038 * 59.99824 * 1 2 3 31 31 H 1.08991 * 109.46896 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47052 * 239.99804 * 2 1 3 33 33 H 1.08997 * 109.46673 * 119.99780 * 2 1 3 34 34 H 1.09000 * 109.46841 * 300.00123 * 8 6 4 35 35 H 1.08997 * 109.47439 * 59.99421 * 8 6 4 36 36 H 1.08996 * 109.47594 * 179.97438 * 9 8 6 37 37 H 1.09011 * 109.46887 * 60.00027 * 9 8 6 38 38 H 1.08999 * 109.47203 * 184.99762 * 12 10 9 39 39 H 1.09008 * 109.47231 * 65.00007 * 12 10 9 40 40 H 1.08991 * 109.47393 * 315.00324 * 21 20 18 41 41 H 0.96698 * 113.99854 * 60.00104 * 22 21 20 42 42 H 1.48504 * 109.99722 * 58.68626 * 23 21 20 43 43 H 1.48500 * 109.99891 * 180.02562 * 23 21 20 44 44 H 1.07998 * 119.93718 * 180.25542 * 24 20 18 45 45 H 1.07996 * 119.96849 * 179.74878 * 25 24 20 46 46 H 1.08003 * 120.02595 * 180.02562 * 26 25 24 47 47 H 1.08998 * 109.46939 * 60.00230 * 27 10 9 48 48 H 1.09000 * 109.46841 * 179.97438 * 27 10 9 49 49 H 1.08996 * 109.47594 * 180.02562 * 28 27 10 50 50 H 1.08997 * 109.47072 * 300.00507 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9208 2.9374 -0.0012 7 1 3.5845 3.4693 -0.8911 8 6 3.4497 3.6847 1.2481 9 6 4.0349 5.0983 1.2478 10 6 5.5629 5.0177 1.2476 11 9 6.0980 6.3104 1.2467 12 6 6.0343 4.2709 2.4968 13 16 5.3525 5.0728 3.9742 14 8 3.9444 4.8919 4.0348 15 8 5.9349 6.3558 4.1588 16 8 5.8868 4.2468 5.1355 17 6 7.2000 4.4645 5.4107 18 6 7.5666 5.4519 6.3150 19 17 6.3482 6.4110 7.0956 20 6 8.9034 5.6743 6.5888 21 6 9.3030 6.7502 7.5654 22 8 9.0378 6.3064 8.8977 23 14 11.1215 7.1114 7.3817 24 6 9.8734 4.9067 5.9714 25 6 9.5103 3.9227 5.0704 26 6 8.1762 3.7001 4.7888 27 6 6.0340 4.2704 -0.0016 28 6 5.4487 2.8568 -0.0014 29 1 -0.3632 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 1.8934 -0.5139 -0.8900 33 1 1.8933 -0.5138 0.8900 34 1 2.3612 3.7417 1.2484 35 1 3.7858 3.1528 2.1381 36 1 3.6990 5.6309 2.1375 37 1 3.6990 5.6305 0.3577 38 1 7.1232 4.2904 2.5426 39 1 5.6910 3.2372 2.4534 40 1 8.7306 7.6554 7.3633 41 1 9.5149 5.5031 9.1470 42 1 11.4155 7.5433 5.9916 43 1 11.5283 8.1704 8.3399 44 1 10.9169 5.0792 6.1896 45 1 10.2702 3.3273 4.5864 46 1 7.8934 2.9310 4.0852 47 1 5.6981 4.8026 -0.8916 48 1 7.1225 4.2134 -0.0020 49 1 5.7846 2.3242 -0.8910 50 1 5.7845 2.3247 0.8887 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_10544596_16464696.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:26:13 Heat of formation + Delta-G solvation = -239.895602 kcal Electronic energy + Delta-G solvation = -41171.904600 eV Core-core repulsion = 35620.603758 eV Total energy + Delta-G solvation = -5551.300842 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.093 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -49.08519 -42.48032 -41.87619 -40.02089 -39.66852 -38.56075 -37.77548 -37.70248 -37.55378 -37.42439 -33.62640 -32.81407 -32.46268 -32.13127 -31.61260 -29.35036 -27.13328 -25.42640 -24.99820 -24.21383 -23.66636 -23.33899 -21.95995 -21.74161 -20.52852 -19.64458 -19.21244 -18.85363 -18.78033 -18.20202 -18.05608 -17.81744 -17.69002 -17.38186 -17.12196 -16.79013 -16.40211 -16.23174 -16.06411 -15.58719 -15.43681 -15.35443 -15.14816 -14.98697 -14.65999 -14.58303 -14.49884 -14.26006 -14.14666 -13.93666 -13.81095 -13.71078 -13.60223 -13.47902 -13.37109 -13.31603 -13.20287 -13.14403 -12.92193 -12.82892 -12.79257 -12.68205 -12.51773 -12.44635 -12.31029 -12.12047 -11.99555 -11.82816 -11.63987 -11.53209 -11.41936 -11.18816 -10.54824 -10.28061 -10.02065 -5.04607 -1.39082 -0.29729 -0.23292 0.65159 0.91422 1.06039 1.22209 1.60098 1.67070 2.00337 2.11826 2.23812 2.60453 2.77216 3.03820 3.06549 3.14373 3.31628 3.39922 3.53168 3.58515 3.62382 3.69925 3.75206 3.79567 3.90363 3.96955 3.98283 4.00416 4.02664 4.13799 4.17106 4.18514 4.25923 4.30945 4.39715 4.49434 4.61458 4.63722 4.72191 4.73579 4.79918 4.85866 4.88092 4.88838 4.96841 4.99307 5.01743 5.08173 5.12442 5.21216 5.43151 5.46718 6.62636 6.75597 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.054 3.946 3 O -0.362 6.362 4 C 0.465 3.535 5 O -0.532 6.532 6 C -0.083 4.083 7 H 0.140 0.860 8 C -0.108 4.108 9 C -0.177 4.177 10 C 0.133 3.867 11 F -0.206 7.206 12 C -0.675 4.675 13 S 2.573 3.427 14 O -0.948 6.948 15 O -0.961 6.961 16 O -0.664 6.664 17 C 0.037 3.963 18 C -0.025 4.025 19 Cl -0.063 7.063 20 C -0.110 4.110 21 C -0.098 4.098 22 O -0.548 6.548 23 Si 0.814 3.186 24 C -0.075 4.075 25 C -0.073 4.073 26 C -0.114 4.114 27 C -0.119 4.119 28 C -0.106 4.106 29 H 0.065 0.935 30 H 0.069 0.931 31 H 0.096 0.904 32 H 0.071 0.929 33 H 0.068 0.932 34 H 0.097 0.903 35 H 0.068 0.932 36 H 0.071 0.929 37 H 0.121 0.879 38 H 0.183 0.817 39 H 0.185 0.815 40 H 0.093 0.907 41 H 0.397 0.603 42 H -0.273 1.273 43 H -0.300 1.300 44 H 0.189 0.811 45 H 0.204 0.796 46 H 0.188 0.812 47 H 0.103 0.897 48 H 0.108 0.892 49 H 0.095 0.905 50 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.964 -7.227 -4.980 11.851 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.020 4.020 3 O -0.279 6.279 4 C 0.310 3.690 5 O -0.422 6.422 6 C -0.101 4.101 7 H 0.158 0.842 8 C -0.146 4.146 9 C -0.215 4.215 10 C 0.114 3.886 11 F -0.186 7.186 12 C -0.804 4.804 13 S 2.672 3.328 14 O -0.946 6.946 15 O -0.959 6.959 16 O -0.623 6.623 17 C -0.005 4.005 18 C -0.054 4.054 19 Cl -0.034 7.034 20 C -0.111 4.111 21 C -0.206 4.206 22 O -0.356 6.356 23 Si 0.716 3.284 24 C -0.093 4.093 25 C -0.090 4.090 26 C -0.133 4.133 27 C -0.158 4.158 28 C -0.144 4.144 29 H 0.085 0.915 30 H 0.088 0.912 31 H 0.114 0.886 32 H 0.090 0.910 33 H 0.086 0.914 34 H 0.115 0.885 35 H 0.086 0.914 36 H 0.090 0.910 37 H 0.140 0.860 38 H 0.201 0.799 39 H 0.203 0.797 40 H 0.111 0.889 41 H 0.247 0.753 42 H -0.199 1.199 43 H -0.228 1.228 44 H 0.205 0.795 45 H 0.221 0.779 46 H 0.205 0.795 47 H 0.122 0.878 48 H 0.127 0.873 49 H 0.113 0.887 50 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 7.689 -5.989 -4.543 10.753 hybrid contribution -1.590 0.230 0.031 1.607 sum 6.099 -5.759 -4.511 9.524 Atomic orbital electron populations 1.21836 0.91015 1.04230 1.03655 1.23252 0.96749 0.79330 1.02620 1.86523 1.24435 1.33511 1.83392 1.24116 0.80609 0.93058 0.71264 1.90667 1.60911 1.44111 1.46498 1.21340 0.97251 0.88728 1.02812 0.84205 1.21500 1.03198 0.93531 0.96355 1.22686 0.92553 0.99665 1.06607 1.20682 0.93808 0.78458 0.95689 1.92975 1.87839 1.40247 1.97539 1.31577 1.17320 1.16176 1.15291 1.06076 0.75291 0.74826 0.76594 1.93619 1.29561 1.85835 1.85555 1.93671 1.78211 1.40885 1.83152 1.85745 1.32273 1.77841 1.66405 1.18341 0.78325 1.00575 1.03236 1.21365 0.91784 0.94791 0.97436 1.98407 1.55095 1.70688 1.79220 1.20547 0.90315 0.99998 1.00256 1.25665 1.15581 0.96395 0.82910 1.86562 1.73229 1.49206 1.26595 0.93964 0.71566 0.85282 0.77583 1.21739 1.00085 0.93349 0.94146 1.21796 0.95219 0.96479 0.95534 1.21992 0.92424 0.98581 1.00337 1.22067 1.03612 0.94917 0.95166 1.21556 0.90887 0.96541 1.05400 0.91542 0.91195 0.88561 0.91030 0.91380 0.88485 0.91356 0.91036 0.86023 0.79914 0.79750 0.88945 0.75269 1.19885 1.22835 0.79480 0.77920 0.79479 0.87837 0.87332 0.88695 0.89951 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.51 10.29 71.98 0.74 1.25 16 2 C 0.05 0.02 6.19 71.98 0.45 0.46 16 3 O -0.36 -0.91 10.12 -51.37 -0.52 -1.43 16 4 C 0.47 0.94 7.25 71.24 0.52 1.46 16 5 O -0.53 -3.66 15.73 21.97 0.35 -3.32 16 6 C -0.08 0.35 2.63 -11.54 -0.03 0.31 16 7 H 0.14 -1.19 8.14 -2.39 -0.02 -1.21 16 8 C -0.11 0.17 4.56 30.59 0.14 0.31 16 9 C -0.18 0.09 4.61 30.59 0.14 0.23 16 10 C 0.13 -0.27 1.11 -10.79 -0.01 -0.28 16 11 F -0.21 -0.79 16.37 44.97 0.74 -0.05 16 12 C -0.67 2.45 4.07 71.98 0.29 2.75 16 13 S 2.57 19.85 4.39 -56.49 -0.25 19.60 16 14 O -0.95 -12.35 14.90 -118.57 -1.77 -14.12 16 15 O -0.96 -13.07 14.88 -118.57 -1.76 -14.83 16 16 O -0.66 -4.73 9.51 -61.86 -0.59 -5.32 16 17 C 0.04 0.14 4.79 22.52 0.11 0.25 16 18 C -0.02 -0.18 5.65 22.41 0.13 -0.05 16 19 Cl -0.06 -0.88 25.90 -2.72 -0.07 -0.95 16 20 C -0.11 -0.01 5.26 -19.86 -0.10 -0.12 16 21 C -0.10 -0.09 2.09 71.24 0.15 0.06 16 22 O -0.55 -0.72 12.83 -148.98 -1.91 -2.63 16 23 Si 0.81 -4.22 29.92 68.60 2.05 -2.17 16 24 C -0.08 0.69 8.66 22.28 0.19 0.89 16 25 C -0.07 0.89 10.04 22.26 0.22 1.12 16 26 C -0.11 0.81 8.46 22.36 0.19 0.99 16 27 C -0.12 0.95 5.19 30.59 0.16 1.11 16 28 C -0.11 0.73 4.22 30.59 0.13 0.86 16 29 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 30 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 31 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 32 H 0.07 0.00 8.13 -2.39 -0.02 -0.02 16 33 H 0.07 0.05 8.13 -2.39 -0.02 0.03 16 34 H 0.10 -0.12 8.11 -2.39 -0.02 -0.14 16 35 H 0.07 -0.05 6.05 -2.39 -0.01 -0.06 16 36 H 0.07 0.33 5.40 -2.39 -0.01 0.31 16 37 H 0.12 -0.57 8.14 -2.38 -0.02 -0.59 16 38 H 0.18 -1.90 6.61 -2.39 -0.02 -1.92 16 39 H 0.19 -1.61 4.83 -2.39 -0.01 -1.63 16 40 H 0.09 0.57 7.41 -2.39 -0.02 0.55 16 41 H 0.40 -3.52 8.70 -74.06 -0.64 -4.16 16 42 H -0.27 0.42 7.11 99.48 0.71 1.13 16 43 H -0.30 -1.02 7.11 99.48 0.71 -0.32 16 44 H 0.19 -3.23 5.13 -2.91 -0.01 -3.24 16 45 H 0.20 -4.38 8.06 -2.91 -0.02 -4.41 16 46 H 0.19 -2.81 7.50 -2.91 -0.02 -2.83 16 47 H 0.10 -1.01 8.14 -2.39 -0.02 -1.03 16 48 H 0.11 -1.19 8.14 -2.39 -0.02 -1.21 16 49 H 0.09 -0.67 8.10 -2.39 -0.02 -0.69 16 50 H 0.08 -0.61 6.28 -2.39 -0.01 -0.62 16 Total: 0.00 -36.86 419.27 0.08 -36.78 By element: Atomic # 1 Polarization: -23.56 SS G_CDS: 0.41 Total: -23.16 kcal Atomic # 6 Polarization: 8.20 SS G_CDS: 3.41 Total: 11.60 kcal Atomic # 8 Polarization: -35.45 SS G_CDS: -6.21 Total: -41.66 kcal Atomic # 9 Polarization: -0.79 SS G_CDS: 0.74 Total: -0.05 kcal Atomic # 14 Polarization: -4.22 SS G_CDS: 2.05 Total: -2.17 kcal Atomic # 16 Polarization: 19.85 SS G_CDS: -0.25 Total: 19.60 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -0.07 Total: -0.95 kcal Total: -36.86 0.08 -36.78 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10544596_16464696.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -203.119 kcal (2) G-P(sol) polarization free energy of solvation -36.858 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -239.976 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.081 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.777 kcal (6) G-S(sol) free energy of system = (1) + (5) -239.896 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds