Wall clock time and date at job start Mon Mar 8 2021 10:26:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45204 * 109.47143 * 2 1 4 4 C 1.34228 * 117.00178 * 179.97438 * 3 2 1 5 5 O 1.20825 * 119.99654 * 359.97438 * 4 3 2 6 6 C 1.50704 * 119.99961 * 180.02562 * 4 3 2 7 7 H 1.08994 * 109.46723 * 300.00073 * 6 4 3 8 8 C 1.52995 * 109.46940 * 59.99771 * 6 4 3 9 9 C 1.52999 * 109.46943 * 179.97438 * 8 6 4 10 10 C 1.53002 * 109.47538 * 300.00203 * 9 8 6 11 11 F 1.39905 * 109.46838 * 299.99965 * 10 9 8 12 12 C 1.52999 * 109.47538 * 179.97438 * 10 9 8 13 13 S 1.81395 * 109.46986 * 59.99873 * 12 10 9 14 14 O 1.42105 * 110.54530 * 291.62628 * 13 12 10 15 15 O 1.42101 * 110.54333 * 68.37799 * 13 12 10 16 16 O 1.52198 * 104.44745 * 180.02562 * 13 12 10 17 17 C 1.35923 * 114.00284 * 75.00333 * 16 13 12 18 18 C 1.38819 * 120.05737 * 269.72766 * 17 16 13 19 19 Cl 1.73598 * 120.03884 * 359.97438 * 18 17 16 20 20 C 1.38258 * 119.91974 * 179.74039 * 18 17 16 21 21 C 1.50702 * 119.97721 * 180.25313 * 20 18 17 22 22 O 1.42899 * 109.47182 * 285.25492 * 21 20 18 23 23 Si 1.86295 * 109.47245 * 165.25165 * 21 20 18 24 24 C 1.38241 * 120.04522 * 0.50668 * 20 18 17 25 25 C 1.38275 * 120.12146 * 359.76511 * 24 20 18 26 26 C 1.38152 * 120.07321 * 359.97438 * 25 24 20 27 27 C 1.53002 * 109.47034 * 59.99687 * 10 9 8 28 28 C 1.53000 * 109.46896 * 179.97438 * 6 4 3 29 29 H 1.08993 * 109.47482 * 300.00006 * 1 2 3 30 30 H 1.09004 * 109.46885 * 60.00226 * 1 2 3 31 31 H 1.08998 * 109.46785 * 179.97438 * 1 2 3 32 32 H 1.08993 * 109.47482 * 239.99994 * 2 1 3 33 33 H 1.08995 * 109.47118 * 119.99868 * 2 1 3 34 34 H 1.08995 * 109.47355 * 300.00119 * 8 6 4 35 35 H 1.09003 * 109.47352 * 60.00413 * 8 6 4 36 36 H 1.08996 * 109.47233 * 180.02562 * 9 8 6 37 37 H 1.09004 * 109.47080 * 60.00351 * 9 8 6 38 38 H 1.09003 * 109.46593 * 299.99948 * 12 10 9 39 39 H 1.08994 * 109.46870 * 180.02562 * 12 10 9 40 40 H 1.09007 * 109.46966 * 45.25464 * 21 20 18 41 41 H 0.96697 * 113.99731 * 299.99951 * 22 21 20 42 42 H 1.48504 * 110.00198 * 179.97438 * 23 21 20 43 43 H 1.48495 * 110.00312 * 301.31889 * 23 21 20 44 44 H 1.08006 * 119.94344 * 179.74551 * 24 20 18 45 45 H 1.07994 * 119.96763 * 179.97438 * 25 24 20 46 46 H 1.08007 * 120.01914 * 179.97438 * 26 25 24 47 47 H 1.09003 * 109.47218 * 59.99978 * 27 10 9 48 48 H 1.08995 * 109.47220 * 180.02562 * 27 10 9 49 49 H 1.09003 * 109.46766 * 60.00616 * 28 6 4 50 50 H 1.08995 * 109.47704 * 300.00327 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0015 6 6 3.9207 2.9375 0.0012 7 1 3.5850 3.4698 -0.8888 8 6 3.4486 3.6841 1.2504 9 6 4.0339 5.0977 1.2513 10 6 5.5618 5.0172 1.2522 11 9 5.9921 4.3336 2.3945 12 6 6.1470 6.4308 1.2525 13 16 5.5874 7.3166 2.7333 14 8 4.1916 7.5740 2.6627 15 8 6.1705 6.7545 3.9008 16 8 6.2284 8.6922 2.6179 17 6 5.6389 9.5016 1.6987 18 6 6.0855 9.5019 0.3843 19 17 7.3984 8.4688 -0.0876 20 6 5.4803 10.3224 -0.5495 21 6 5.9604 10.3196 -1.9780 22 8 7.2024 11.0209 -2.0645 23 14 4.6967 11.1586 -3.0595 24 6 4.4385 11.1492 -0.1725 25 6 3.9959 11.1545 1.1375 26 6 4.5935 10.3327 2.0734 27 6 6.0338 4.2706 0.0029 28 6 5.4486 2.8575 0.0023 29 1 -0.3634 0.5138 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 1.8934 -0.5138 -0.8899 33 1 1.8933 -0.5138 0.8900 34 1 2.3601 3.7411 1.2500 35 1 3.7843 3.1517 2.1404 36 1 3.6979 5.6294 2.1415 37 1 3.6986 5.6303 0.3614 38 1 5.8117 6.9630 0.3623 39 1 7.2354 6.3734 1.2527 40 1 6.0996 9.2915 -2.3125 41 1 7.1531 11.9444 -1.7819 42 1 5.1586 11.1630 -4.4708 43 1 3.3919 10.4576 -2.9538 44 1 3.9696 11.7925 -0.9025 45 1 3.1821 11.8017 1.4293 46 1 4.2474 10.3378 3.0965 47 1 5.6985 4.8032 -0.8871 48 1 7.1223 4.2129 0.0037 49 1 5.7852 2.3255 -0.8876 50 1 5.7839 2.3252 0.8924 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10544596_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:26:19 Heat of formation + Delta-G solvation = -237.529096 kcal Electronic energy + Delta-G solvation = -41138.415729 eV Core-core repulsion = 35587.217507 eV Total energy + Delta-G solvation = -5551.198223 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.093 amu Computer time = 3.27 seconds Orbital eigenvalues (eV) -49.05136 -42.56122 -41.66726 -40.17607 -39.16518 -38.41131 -38.06765 -37.71080 -37.52025 -37.29270 -34.27038 -32.99847 -32.67674 -32.19493 -31.84842 -29.21685 -27.34775 -25.26394 -24.98170 -24.26189 -23.64633 -23.51929 -22.01640 -21.54702 -20.93485 -19.72853 -19.21905 -18.96351 -18.69247 -18.35872 -17.90814 -17.81158 -17.62655 -17.25654 -17.06622 -16.90893 -16.59907 -16.35292 -16.26539 -15.77409 -15.61408 -15.32924 -15.06335 -14.94198 -14.81717 -14.70884 -14.52130 -14.33267 -14.16599 -14.03324 -13.84098 -13.64478 -13.64019 -13.48480 -13.37387 -13.34193 -13.28149 -13.24614 -13.11055 -12.92908 -12.88080 -12.76500 -12.56316 -12.36052 -12.28344 -12.18513 -12.02663 -11.92318 -11.73833 -11.50361 -11.28585 -11.16985 -10.76928 -10.43798 -10.27051 -5.28443 -1.34164 -0.51217 -0.41292 0.48078 0.74804 0.99489 1.20214 1.42009 1.61989 1.76369 1.88030 2.26608 2.60910 2.75236 2.89054 2.98405 3.15304 3.23338 3.26496 3.38861 3.42192 3.46935 3.51442 3.58999 3.70068 3.73553 3.88495 3.93079 3.95426 3.97325 3.99185 4.03832 4.12912 4.16584 4.21925 4.29000 4.37699 4.43708 4.46056 4.50219 4.64502 4.68891 4.70156 4.73986 4.79019 4.79814 4.84125 4.89239 4.99633 5.01646 5.15365 5.16090 5.48087 6.31936 6.75946 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.467 3.533 5 O -0.503 6.503 6 C -0.082 4.082 7 H 0.114 0.886 8 C -0.111 4.111 9 C -0.168 4.168 10 C 0.137 3.863 11 F -0.189 7.189 12 C -0.686 4.686 13 S 2.591 3.409 14 O -0.940 6.940 15 O -0.902 6.902 16 O -0.654 6.654 17 C 0.075 3.925 18 C -0.036 4.036 19 Cl -0.030 7.030 20 C -0.096 4.096 21 C -0.074 4.074 22 O -0.527 6.527 23 Si 0.690 3.310 24 C -0.085 4.085 25 C -0.086 4.086 26 C -0.070 4.070 27 C -0.127 4.127 28 C -0.109 4.109 29 H 0.068 0.932 30 H 0.067 0.933 31 H 0.081 0.919 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.093 0.907 35 H 0.081 0.919 36 H 0.098 0.902 37 H 0.100 0.900 38 H 0.155 0.845 39 H 0.154 0.846 40 H 0.120 0.880 41 H 0.381 0.619 42 H -0.248 1.248 43 H -0.250 1.250 44 H 0.151 0.849 45 H 0.156 0.844 46 H 0.156 0.844 47 H 0.089 0.911 48 H 0.089 0.911 49 H 0.085 0.915 50 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.074 7.307 -4.862 10.138 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.309 3.691 5 O -0.390 6.390 6 C -0.101 4.101 7 H 0.131 0.869 8 C -0.149 4.149 9 C -0.206 4.206 10 C 0.117 3.883 11 F -0.169 7.169 12 C -0.812 4.812 13 S 2.685 3.315 14 O -0.938 6.938 15 O -0.900 6.900 16 O -0.612 6.612 17 C 0.032 3.968 18 C -0.065 4.065 19 Cl -0.001 7.001 20 C -0.097 4.097 21 C -0.184 4.184 22 O -0.332 6.332 23 Si 0.589 3.411 24 C -0.103 4.103 25 C -0.104 4.104 26 C -0.090 4.090 27 C -0.166 4.166 28 C -0.147 4.147 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.100 0.900 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.112 0.888 35 H 0.100 0.900 36 H 0.116 0.884 37 H 0.119 0.881 38 H 0.173 0.827 39 H 0.172 0.828 40 H 0.137 0.863 41 H 0.228 0.772 42 H -0.172 1.172 43 H -0.174 1.174 44 H 0.168 0.832 45 H 0.173 0.827 46 H 0.174 0.826 47 H 0.108 0.892 48 H 0.107 0.893 49 H 0.103 0.897 50 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -5.213 6.366 -5.024 9.640 hybrid contribution 0.988 -1.235 -0.102 1.585 sum -4.226 5.131 -5.126 8.394 Atomic orbital electron populations 1.21820 0.92298 1.03272 1.03657 1.23087 0.95609 0.79821 1.02776 1.86498 1.24304 1.32787 1.83788 1.23600 0.80747 0.92418 0.72331 1.90694 1.60460 1.43039 1.44820 1.21168 0.96681 0.90214 1.02052 0.86852 1.21500 1.02353 0.94069 0.96940 1.22650 0.91908 0.99463 1.06564 1.20519 0.94856 0.87483 0.85417 1.92985 1.91194 1.81081 1.51664 1.32028 1.14504 1.09587 1.25064 1.05800 0.74731 0.74162 0.76819 1.93657 1.31773 1.81325 1.87040 1.93703 1.78023 1.75654 1.42601 1.85792 1.70538 1.43277 1.61616 1.17809 0.96614 0.97824 0.84527 1.21059 0.93991 0.99027 0.92465 1.98429 1.46000 1.63645 1.91981 1.20280 0.96555 0.96244 0.96638 1.25221 0.95416 1.02652 0.95119 1.86597 1.29599 1.28210 1.88789 0.94860 0.76698 0.89652 0.79863 1.21269 0.94850 0.97122 0.97065 1.21271 0.99479 0.97742 0.91897 1.21455 0.92361 0.92950 1.02262 1.22073 1.02600 0.95833 0.96067 1.21478 0.91641 0.96387 1.05187 0.91310 0.91397 0.90008 0.91124 0.91052 0.88838 0.90049 0.88356 0.88115 0.82713 0.82815 0.86271 0.77174 1.17188 1.17413 0.83156 0.82671 0.82650 0.89200 0.89256 0.89669 0.89686 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.21 10.29 37.16 0.38 0.60 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.65 10.12 -39.25 -0.40 -1.05 16 4 C 0.47 1.13 7.26 36.01 0.26 1.39 16 5 O -0.50 -2.71 15.73 -18.75 -0.29 -3.00 16 6 C -0.08 0.03 2.63 -91.77 -0.24 -0.22 16 7 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 8 C -0.11 0.04 5.01 -26.73 -0.13 -0.10 16 9 C -0.17 0.08 4.52 -26.73 -0.12 -0.04 16 10 C 0.14 0.04 0.88 -90.62 -0.08 -0.03 16 11 F -0.19 -0.62 15.04 2.25 0.03 -0.59 16 12 C -0.69 0.18 3.29 37.16 0.12 0.30 16 13 S 2.59 6.73 4.51 -107.50 -0.49 6.25 16 14 O -0.94 -2.52 13.88 -67.04 -0.93 -3.45 16 15 O -0.90 -5.83 17.61 -67.03 -1.18 -7.01 16 16 O -0.65 -1.35 9.58 -51.82 -0.50 -1.84 16 17 C 0.07 0.03 4.79 -39.19 -0.19 -0.16 16 18 C -0.04 0.02 5.61 -39.36 -0.22 -0.20 16 19 Cl -0.03 0.01 22.36 -51.86 -1.16 -1.15 16 20 C -0.10 0.25 5.26 -104.61 -0.55 -0.30 16 21 C -0.07 0.21 2.09 36.01 0.08 0.29 16 22 O -0.53 1.19 12.81 -35.23 -0.45 0.74 16 23 Si 0.69 -2.79 29.91 -169.99 -5.08 -7.87 16 24 C -0.08 0.39 8.66 -39.57 -0.34 0.04 16 25 C -0.09 0.36 10.04 -39.60 -0.40 -0.04 16 26 C -0.07 0.11 9.05 -39.44 -0.36 -0.25 16 27 C -0.13 0.18 5.00 -26.75 -0.13 0.04 16 28 C -0.11 0.00 4.37 -26.75 -0.12 -0.12 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 33 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 34 H 0.09 -0.12 8.11 -51.93 -0.42 -0.54 16 35 H 0.08 0.06 7.80 -51.93 -0.41 -0.34 16 36 H 0.10 0.04 5.46 -51.93 -0.28 -0.24 16 37 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 38 H 0.15 -0.39 5.57 -51.92 -0.29 -0.68 16 39 H 0.15 -0.20 7.25 -51.93 -0.38 -0.57 16 40 H 0.12 -0.28 7.42 -51.93 -0.39 -0.67 16 41 H 0.38 -2.39 8.70 45.56 0.40 -1.99 16 42 H -0.25 0.09 7.11 56.52 0.40 0.50 16 43 H -0.25 0.49 7.11 56.52 0.40 0.89 16 44 H 0.15 -1.15 5.12 -52.48 -0.27 -1.42 16 45 H 0.16 -1.11 8.06 -52.49 -0.42 -1.53 16 46 H 0.16 -0.40 8.06 -52.48 -0.42 -0.83 16 47 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 48 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 49 H 0.08 -0.01 8.10 -51.93 -0.42 -0.43 16 50 H 0.08 0.15 7.76 -51.93 -0.40 -0.25 16 LS Contribution 421.38 15.07 6.35 6.35 Total: 0.00 -11.80 421.38 -12.61 -24.41 By element: Atomic # 1 Polarization: -6.56 SS G_CDS: -6.70 Total: -13.26 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: -1.81 Total: 1.48 kcal Atomic # 8 Polarization: -11.87 SS G_CDS: -3.75 Total: -15.62 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.03 Total: -0.59 kcal Atomic # 14 Polarization: -2.79 SS G_CDS: -5.08 Total: -7.87 kcal Atomic # 16 Polarization: 6.73 SS G_CDS: -0.49 Total: 6.25 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -1.16 Total: -1.15 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -11.80 -12.61 -24.41 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10544596_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -213.115 kcal (2) G-P(sol) polarization free energy of solvation -11.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -224.917 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.612 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.414 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.529 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.27 seconds