Wall clock time and date at job start Mon Mar 8 2021 10:26:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45204 * 109.47143 * 2 1 4 4 C 1.34228 * 117.00178 * 179.97438 * 3 2 1 5 5 O 1.20825 * 119.99654 * 359.97438 * 4 3 2 6 6 C 1.50704 * 119.99961 * 180.02562 * 4 3 2 7 7 H 1.08994 * 109.46723 * 300.00073 * 6 4 3 8 8 C 1.52995 * 109.46940 * 59.99771 * 6 4 3 9 9 C 1.52999 * 109.46943 * 179.97438 * 8 6 4 10 10 C 1.53002 * 109.47538 * 300.00203 * 9 8 6 11 11 F 1.39905 * 109.46838 * 299.99965 * 10 9 8 12 12 C 1.52999 * 109.47538 * 179.97438 * 10 9 8 13 13 S 1.81395 * 109.46986 * 59.99873 * 12 10 9 14 14 O 1.42105 * 110.54530 * 291.62628 * 13 12 10 15 15 O 1.42101 * 110.54333 * 68.37799 * 13 12 10 16 16 O 1.52198 * 104.44745 * 180.02562 * 13 12 10 17 17 C 1.35923 * 114.00284 * 75.00333 * 16 13 12 18 18 C 1.38819 * 120.05737 * 269.72766 * 17 16 13 19 19 Cl 1.73598 * 120.03884 * 359.97438 * 18 17 16 20 20 C 1.38258 * 119.91974 * 179.74039 * 18 17 16 21 21 C 1.50702 * 119.97721 * 180.25313 * 20 18 17 22 22 O 1.42899 * 109.47182 * 285.25492 * 21 20 18 23 23 Si 1.86295 * 109.47245 * 165.25165 * 21 20 18 24 24 C 1.38241 * 120.04522 * 0.50668 * 20 18 17 25 25 C 1.38275 * 120.12146 * 359.76511 * 24 20 18 26 26 C 1.38152 * 120.07321 * 359.97438 * 25 24 20 27 27 C 1.53002 * 109.47034 * 59.99687 * 10 9 8 28 28 C 1.53000 * 109.46896 * 179.97438 * 6 4 3 29 29 H 1.08993 * 109.47482 * 300.00006 * 1 2 3 30 30 H 1.09004 * 109.46885 * 60.00226 * 1 2 3 31 31 H 1.08998 * 109.46785 * 179.97438 * 1 2 3 32 32 H 1.08993 * 109.47482 * 239.99994 * 2 1 3 33 33 H 1.08995 * 109.47118 * 119.99868 * 2 1 3 34 34 H 1.08995 * 109.47355 * 300.00119 * 8 6 4 35 35 H 1.09003 * 109.47352 * 60.00413 * 8 6 4 36 36 H 1.08996 * 109.47233 * 180.02562 * 9 8 6 37 37 H 1.09004 * 109.47080 * 60.00351 * 9 8 6 38 38 H 1.09003 * 109.46593 * 299.99948 * 12 10 9 39 39 H 1.08994 * 109.46870 * 180.02562 * 12 10 9 40 40 H 1.09007 * 109.46966 * 45.25464 * 21 20 18 41 41 H 0.96697 * 113.99731 * 299.99951 * 22 21 20 42 42 H 1.48504 * 110.00198 * 179.97438 * 23 21 20 43 43 H 1.48495 * 110.00312 * 301.31889 * 23 21 20 44 44 H 1.08006 * 119.94344 * 179.74551 * 24 20 18 45 45 H 1.07994 * 119.96763 * 179.97438 * 25 24 20 46 46 H 1.08007 * 120.01914 * 179.97438 * 26 25 24 47 47 H 1.09003 * 109.47218 * 59.99978 * 27 10 9 48 48 H 1.08995 * 109.47220 * 180.02562 * 27 10 9 49 49 H 1.09003 * 109.46766 * 60.00616 * 28 6 4 50 50 H 1.08995 * 109.47704 * 300.00327 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0015 6 6 3.9207 2.9375 0.0012 7 1 3.5850 3.4698 -0.8888 8 6 3.4486 3.6841 1.2504 9 6 4.0339 5.0977 1.2513 10 6 5.5618 5.0172 1.2522 11 9 5.9921 4.3336 2.3945 12 6 6.1470 6.4308 1.2525 13 16 5.5874 7.3166 2.7333 14 8 4.1916 7.5740 2.6627 15 8 6.1705 6.7545 3.9008 16 8 6.2284 8.6922 2.6179 17 6 5.6389 9.5016 1.6987 18 6 6.0855 9.5019 0.3843 19 17 7.3984 8.4688 -0.0876 20 6 5.4803 10.3224 -0.5495 21 6 5.9604 10.3196 -1.9780 22 8 7.2024 11.0209 -2.0645 23 14 4.6967 11.1586 -3.0595 24 6 4.4385 11.1492 -0.1725 25 6 3.9959 11.1545 1.1375 26 6 4.5935 10.3327 2.0734 27 6 6.0338 4.2706 0.0029 28 6 5.4486 2.8575 0.0023 29 1 -0.3634 0.5138 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 1.8934 -0.5138 -0.8899 33 1 1.8933 -0.5138 0.8900 34 1 2.3601 3.7411 1.2500 35 1 3.7843 3.1517 2.1404 36 1 3.6979 5.6294 2.1415 37 1 3.6986 5.6303 0.3614 38 1 5.8117 6.9630 0.3623 39 1 7.2354 6.3734 1.2527 40 1 6.0996 9.2915 -2.3125 41 1 7.1531 11.9444 -1.7819 42 1 5.1586 11.1630 -4.4708 43 1 3.3919 10.4576 -2.9538 44 1 3.9696 11.7925 -0.9025 45 1 3.1821 11.8017 1.4293 46 1 4.2474 10.3378 3.0965 47 1 5.6985 4.8032 -0.8871 48 1 7.1223 4.2129 0.0037 49 1 5.7852 2.3255 -0.8876 50 1 5.7839 2.3252 0.8924 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_10544596_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:26:17 Heat of formation + Delta-G solvation = -238.205371 kcal Electronic energy + Delta-G solvation = -41138.445055 eV Core-core repulsion = 35587.217507 eV Total energy + Delta-G solvation = -5551.227548 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.093 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -49.18049 -42.49860 -41.82750 -40.01858 -39.18969 -38.60897 -37.96075 -37.71658 -37.52636 -37.44695 -34.30705 -32.76395 -32.66147 -32.15188 -31.64498 -29.22384 -27.10331 -25.25391 -24.91179 -24.22000 -23.59713 -23.36380 -22.08136 -21.52947 -20.94285 -19.77585 -19.20776 -18.95932 -18.80881 -18.25928 -17.89619 -17.75601 -17.71067 -17.24468 -17.04726 -16.94054 -16.48923 -16.39956 -16.21422 -15.57836 -15.40168 -15.34741 -15.08100 -14.95464 -14.81443 -14.62469 -14.55251 -14.23896 -14.15927 -14.07207 -13.76452 -13.62835 -13.58187 -13.54366 -13.40587 -13.29821 -13.26450 -13.19931 -13.16638 -12.95323 -12.88519 -12.62494 -12.56113 -12.29335 -12.14863 -12.05665 -12.03707 -11.83540 -11.72301 -11.59440 -11.38114 -11.19132 -10.50268 -10.23921 -10.07080 -4.95930 -1.40202 -0.33145 -0.20795 0.58175 0.76472 1.02751 1.28113 1.55480 1.72224 2.05021 2.13926 2.17315 2.55796 2.70562 3.01487 3.08846 3.19596 3.29494 3.45760 3.52309 3.59288 3.62457 3.72011 3.73451 3.77748 3.92197 3.93828 3.97683 4.00718 4.02014 4.07201 4.19504 4.23744 4.24265 4.28036 4.41038 4.46513 4.56394 4.63781 4.71234 4.73052 4.77036 4.83046 4.86296 4.87070 4.93484 5.01332 5.03048 5.07293 5.09731 5.17439 5.39123 5.46067 6.59480 6.79317 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.540 6.540 6 C -0.077 4.077 7 H 0.147 0.853 8 C -0.109 4.109 9 C -0.171 4.171 10 C 0.125 3.875 11 F -0.212 7.212 12 C -0.672 4.672 13 S 2.589 3.411 14 O -0.947 6.947 15 O -0.957 6.957 16 O -0.662 6.662 17 C 0.043 3.957 18 C -0.048 4.048 19 Cl -0.042 7.042 20 C -0.097 4.097 21 C -0.085 4.085 22 O -0.546 6.546 23 Si 0.789 3.211 24 C -0.072 4.072 25 C -0.074 4.074 26 C -0.086 4.086 27 C -0.123 4.123 28 C -0.109 4.109 29 H 0.068 0.932 30 H 0.071 0.929 31 H 0.095 0.905 32 H 0.069 0.931 33 H 0.064 0.936 34 H 0.105 0.895 35 H 0.060 0.940 36 H 0.086 0.914 37 H 0.133 0.867 38 H 0.181 0.819 39 H 0.162 0.838 40 H 0.111 0.889 41 H 0.397 0.603 42 H -0.302 1.302 43 H -0.270 1.270 44 H 0.187 0.813 45 H 0.191 0.809 46 H 0.157 0.843 47 H 0.122 0.878 48 H 0.092 0.908 49 H 0.087 0.913 50 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.814 9.582 -6.979 13.673 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.020 4.020 3 O -0.274 6.274 4 C 0.310 3.690 5 O -0.430 6.430 6 C -0.096 4.096 7 H 0.165 0.835 8 C -0.147 4.147 9 C -0.208 4.208 10 C 0.105 3.895 11 F -0.193 7.193 12 C -0.800 4.800 13 S 2.687 3.313 14 O -0.946 6.946 15 O -0.955 6.955 16 O -0.622 6.622 17 C 0.001 3.999 18 C -0.077 4.077 19 Cl -0.013 7.013 20 C -0.098 4.098 21 C -0.194 4.194 22 O -0.354 6.354 23 Si 0.692 3.308 24 C -0.090 4.090 25 C -0.092 4.092 26 C -0.107 4.107 27 C -0.161 4.161 28 C -0.146 4.146 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.114 0.886 32 H 0.087 0.913 33 H 0.082 0.918 34 H 0.124 0.876 35 H 0.079 0.921 36 H 0.104 0.896 37 H 0.151 0.849 38 H 0.198 0.802 39 H 0.180 0.820 40 H 0.129 0.871 41 H 0.247 0.753 42 H -0.230 1.230 43 H -0.195 1.195 44 H 0.204 0.796 45 H 0.208 0.792 46 H 0.175 0.825 47 H 0.140 0.860 48 H 0.111 0.889 49 H 0.106 0.894 50 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -6.962 8.665 -7.071 13.174 hybrid contribution 1.516 -1.886 0.457 2.462 sum -5.446 6.780 -6.614 10.925 Atomic orbital electron populations 1.21821 0.90508 1.04267 1.03846 1.23256 0.97035 0.79377 1.02378 1.86507 1.24032 1.33419 1.83431 1.24191 0.80665 0.93115 0.71079 1.90676 1.61198 1.44431 1.46678 1.21269 0.96201 0.88775 1.03319 0.83537 1.21477 1.03047 0.94038 0.96126 1.22739 0.91172 0.99360 1.07572 1.20877 0.95651 0.87596 0.85337 1.92945 1.91496 1.81634 1.53182 1.31938 1.15039 1.09020 1.24005 1.05661 0.74434 0.74194 0.77028 1.93622 1.32115 1.81479 1.87346 1.93633 1.78855 1.76967 1.46028 1.85765 1.70638 1.43265 1.62488 1.18214 0.98134 0.98815 0.84764 1.21195 0.94145 0.99832 0.92529 1.98417 1.46728 1.64181 1.91988 1.20461 0.96901 0.96118 0.96318 1.25472 0.95850 1.02739 0.95314 1.86563 1.30169 1.29711 1.88952 0.93781 0.73765 0.87585 0.75665 1.21700 0.93489 0.96142 0.97670 1.21710 0.99404 0.96757 0.91333 1.21759 0.92285 0.93351 1.03265 1.22119 1.02832 0.94902 0.96256 1.21442 0.92090 0.97089 1.04011 0.91259 0.90978 0.88638 0.91300 0.91788 0.87637 0.92144 0.89575 0.84883 0.80158 0.82031 0.87105 0.75258 1.23025 1.19550 0.79597 0.79182 0.82504 0.85971 0.88942 0.89425 0.92360 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.45 10.29 71.98 0.74 1.19 16 2 C 0.05 0.10 6.19 71.98 0.45 0.55 16 3 O -0.36 -1.43 10.12 -51.39 -0.52 -1.95 16 4 C 0.47 2.61 7.26 71.24 0.52 3.13 16 5 O -0.54 -6.76 15.73 21.97 0.35 -6.41 16 6 C -0.08 0.07 2.63 -11.54 -0.03 0.04 16 7 H 0.15 -1.09 8.14 -2.39 -0.02 -1.11 16 8 C -0.11 0.03 5.01 30.59 0.15 0.19 16 9 C -0.17 0.20 4.52 30.59 0.14 0.34 16 10 C 0.12 0.14 0.88 -10.79 -0.01 0.13 16 11 F -0.21 -1.91 15.04 44.97 0.68 -1.23 16 12 C -0.67 0.03 3.29 71.98 0.24 0.27 16 13 S 2.59 18.06 4.51 -56.49 -0.25 17.81 16 14 O -0.95 -6.19 13.88 -118.57 -1.65 -7.83 16 15 O -0.96 -15.54 17.61 -118.57 -2.09 -17.63 16 16 O -0.66 -3.82 9.58 -61.77 -0.59 -4.42 16 17 C 0.04 0.04 4.79 22.52 0.11 0.15 16 18 C -0.05 0.08 5.61 22.41 0.13 0.21 16 19 Cl -0.04 0.02 22.36 -2.72 -0.06 -0.04 16 20 C -0.10 0.67 5.26 -19.86 -0.10 0.57 16 21 C -0.09 0.61 2.09 71.24 0.15 0.76 16 22 O -0.55 3.03 12.81 -148.98 -1.91 1.12 16 23 Si 0.79 -7.98 29.91 68.60 2.05 -5.93 16 24 C -0.07 0.88 8.66 22.28 0.19 1.07 16 25 C -0.07 0.83 10.04 22.26 0.22 1.05 16 26 C -0.09 0.32 9.05 22.36 0.20 0.52 16 27 C -0.12 0.40 5.00 30.58 0.15 0.56 16 28 C -0.11 -0.06 4.37 30.58 0.13 0.08 16 29 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 30 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 31 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.07 0.15 8.13 -2.39 -0.02 0.13 16 33 H 0.06 0.20 8.13 -2.39 -0.02 0.18 16 34 H 0.11 -0.30 8.11 -2.39 -0.02 -0.32 16 35 H 0.06 0.23 7.80 -2.39 -0.02 0.21 16 36 H 0.09 0.16 5.46 -2.39 -0.01 0.14 16 37 H 0.13 -1.07 8.14 -2.39 -0.02 -1.09 16 38 H 0.18 -1.04 5.57 -2.39 -0.01 -1.05 16 39 H 0.16 -0.26 7.25 -2.39 -0.02 -0.28 16 40 H 0.11 -0.63 7.42 -2.38 -0.02 -0.65 16 41 H 0.40 -5.59 8.70 -74.06 -0.64 -6.23 16 42 H -0.30 0.26 7.11 99.48 0.71 0.97 16 43 H -0.27 1.79 7.11 99.48 0.71 2.50 16 44 H 0.19 -3.69 5.12 -2.91 -0.01 -3.70 16 45 H 0.19 -3.48 8.06 -2.91 -0.02 -3.51 16 46 H 0.16 -0.76 8.06 -2.91 -0.02 -0.79 16 47 H 0.12 -1.18 8.14 -2.39 -0.02 -1.20 16 48 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 49 H 0.09 0.00 8.10 -2.39 -0.02 -0.02 16 50 H 0.06 0.35 7.76 -2.39 -0.02 0.33 16 Total: 0.00 -32.41 421.38 -0.23 -32.64 By element: Atomic # 1 Polarization: -17.32 SS G_CDS: 0.40 Total: -16.92 kcal Atomic # 6 Polarization: 7.42 SS G_CDS: 3.37 Total: 10.80 kcal Atomic # 8 Polarization: -30.71 SS G_CDS: -6.41 Total: -37.12 kcal Atomic # 9 Polarization: -1.91 SS G_CDS: 0.68 Total: -1.23 kcal Atomic # 14 Polarization: -7.98 SS G_CDS: 2.05 Total: -5.93 kcal Atomic # 16 Polarization: 18.06 SS G_CDS: -0.25 Total: 17.81 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.06 Total: -0.04 kcal Total: -32.41 -0.23 -32.64 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10544596_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -205.569 kcal (2) G-P(sol) polarization free energy of solvation -32.411 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -237.979 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.637 kcal (6) G-S(sol) free energy of system = (1) + (5) -238.205 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds