Wall clock time and date at job start Mon Mar 8 2021 10:29:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.45192 * 109.47043 * 2 1 4 4 C 1.34229 * 117.00207 * 179.97438 * 3 2 1 5 5 O 1.20821 * 119.99821 * 359.97438 * 4 3 2 6 6 C 1.50702 * 119.99926 * 179.97438 * 4 3 2 7 7 H 1.08994 * 112.91064 * 48.75165 * 6 4 3 8 8 C 1.53787 * 113.61150 * 180.02562 * 6 4 3 9 9 C 1.53779 * 87.07963 * 139.98062 * 8 6 4 10 10 F 1.39901 * 113.61423 * 89.20237 * 9 8 6 11 11 C 1.52998 * 113.61250 * 220.01477 * 9 8 6 12 12 S 1.81400 * 109.47290 * 180.02562 * 11 9 8 13 13 O 1.42104 * 110.54206 * 291.62869 * 12 11 9 14 14 O 1.42101 * 110.54194 * 68.37366 * 12 11 9 15 15 O 1.52201 * 104.45256 * 179.97438 * 12 11 9 16 16 C 1.35927 * 113.99679 * 74.99934 * 15 12 11 17 17 C 1.38814 * 120.06046 * 269.72937 * 16 15 12 18 18 Cl 1.73600 * 120.03934 * 359.97438 * 17 16 15 19 19 C 1.38254 * 119.92399 * 179.74993 * 17 16 15 20 20 C 1.50700 * 119.97889 * 180.25165 * 19 17 16 21 21 O 1.42902 * 109.47285 * 75.25134 * 20 19 17 22 22 Si 1.86305 * 109.46857 * 195.24988 * 20 19 17 23 23 C 1.38252 * 120.04225 * 0.49818 * 19 17 16 24 24 C 1.38278 * 120.11827 * 359.77444 * 23 19 17 25 25 C 1.38154 * 120.07307 * 359.97438 * 24 23 19 26 26 C 1.53779 * 87.08402 * 334.56577 * 9 8 6 27 27 H 1.08996 * 109.47324 * 60.00548 * 1 2 3 28 28 H 1.09008 * 109.46622 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47423 * 299.99782 * 1 2 3 30 30 H 1.09000 * 109.46889 * 239.99436 * 2 1 3 31 31 H 1.09002 * 109.46652 * 119.99417 * 2 1 3 32 32 H 1.08997 * 113.61028 * 254.53022 * 8 6 4 33 33 H 1.08998 * 113.61447 * 25.34557 * 8 6 4 34 34 H 1.09001 * 109.47338 * 300.00218 * 11 9 8 35 35 H 1.09004 * 109.47040 * 60.00261 * 11 9 8 36 36 H 1.08996 * 109.47571 * 315.24890 * 20 19 17 37 37 H 0.96704 * 113.99897 * 60.00012 * 21 20 19 38 38 H 1.48497 * 110.00095 * 58.67953 * 22 20 19 39 39 H 1.48506 * 109.99845 * 180.02562 * 22 20 19 40 40 H 1.07995 * 119.94036 * 179.74940 * 23 19 17 41 41 H 1.08000 * 119.95977 * 179.97438 * 24 23 19 42 42 H 1.08005 * 120.01674 * 180.02562 * 25 24 23 43 43 H 1.09002 * 113.61557 * 270.88569 * 26 9 8 44 44 H 1.09004 * 113.61501 * 139.97990 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5867 0.0015 6 6 3.9206 2.9375 0.0000 7 1 3.4707 3.5830 0.7542 8 6 5.4582 2.9682 0.0001 9 6 5.3564 4.1421 -0.9880 10 9 5.2850 5.3933 -0.3663 11 6 6.3987 4.0934 -2.1070 12 16 6.1784 5.5232 -3.2013 13 8 4.9608 5.4137 -3.9258 14 8 6.5239 6.7253 -2.5269 15 8 7.2609 5.3625 -4.2590 16 6 6.9959 4.3976 -5.1791 17 6 7.4200 3.0939 -4.9613 18 17 8.2902 2.6935 -3.5135 19 6 7.1444 2.1137 -5.8965 20 6 7.5992 0.6968 -5.6587 21 8 6.7566 0.0838 -4.6807 22 14 7.5005 -0.2629 -7.2525 23 6 6.4563 2.4336 -7.0522 24 6 6.0380 3.7328 -7.2736 25 6 6.3062 4.7151 -6.3398 26 6 3.9863 3.5764 -1.3973 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0278 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 1.8933 -0.5139 -0.8899 31 1 1.8933 -0.5138 0.8901 32 1 5.8893 3.2436 0.9625 33 1 5.9128 2.0743 -0.4270 34 1 7.3986 4.1187 -1.6736 35 1 6.2742 3.1744 -2.6798 36 1 8.6285 0.7008 -5.3002 37 1 5.8240 0.0455 -4.9335 38 1 8.3476 0.3827 -8.2874 39 1 7.9458 -1.6622 -7.0313 40 1 6.2454 1.6674 -7.7835 41 1 5.5010 3.9800 -8.1774 42 1 5.9787 5.7295 -6.5135 43 1 4.0385 2.8494 -2.2078 44 1 3.2292 4.3429 -1.5629 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_10544596_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:29:22 Heat of formation + Delta-G solvation = -198.928044 kcal Electronic energy + Delta-G solvation = -36704.759695 eV Core-core repulsion = 31466.310577 eV Total energy + Delta-G solvation = -5238.449117 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.062 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -49.27979 -42.51953 -41.86143 -40.04635 -39.37952 -38.61788 -37.99328 -37.55522 -37.53367 -37.46768 -32.84851 -32.78271 -32.11469 -31.63171 -27.36695 -27.21574 -26.89927 -25.01424 -23.94653 -23.41887 -22.45092 -21.52789 -20.92836 -19.80683 -19.32242 -19.09902 -18.80171 -18.34912 -17.84945 -17.71783 -17.65665 -17.33488 -17.08473 -16.68084 -16.41821 -16.30958 -16.08226 -15.65611 -15.44105 -15.37342 -14.93945 -14.72193 -14.67183 -14.64011 -14.44616 -14.17048 -13.87250 -13.68097 -13.65621 -13.58926 -13.52484 -13.38783 -13.19729 -13.18003 -13.09870 -12.95252 -12.64827 -12.55383 -12.50170 -12.31788 -12.08579 -11.96083 -11.77369 -11.55575 -11.51830 -11.43854 -10.55101 -10.27503 -10.10845 -5.01872 -1.42000 -0.36067 -0.24140 0.54603 0.74400 0.99065 1.22980 1.54803 1.67412 2.00909 2.10931 2.18150 2.51889 2.63315 2.68173 2.80916 3.06528 3.12800 3.19560 3.46194 3.53567 3.64978 3.69726 3.73732 3.82005 3.98879 3.99447 4.04819 4.05842 4.19432 4.26517 4.31084 4.34677 4.38728 4.40005 4.59765 4.61039 4.68209 4.69950 4.83485 4.91931 4.97942 4.98897 5.03884 5.14352 5.41346 5.43077 6.60701 6.75320 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.053 3.947 3 O -0.358 6.358 4 C 0.478 3.522 5 O -0.528 6.528 6 C -0.106 4.106 7 H 0.152 0.848 8 C -0.117 4.117 9 C 0.092 3.908 10 F -0.186 7.186 11 C -0.661 4.661 12 S 2.592 3.408 13 O -0.946 6.946 14 O -0.952 6.952 15 O -0.662 6.662 16 C 0.043 3.957 17 C -0.050 4.050 18 Cl -0.044 7.044 19 C -0.098 4.098 20 C -0.086 4.086 21 O -0.543 6.543 22 Si 0.796 3.204 23 C -0.073 4.073 24 C -0.074 4.074 25 C -0.086 4.086 26 C -0.141 4.141 27 H 0.070 0.930 28 H 0.096 0.904 29 H 0.066 0.934 30 H 0.074 0.926 31 H 0.067 0.933 32 H 0.108 0.892 33 H 0.122 0.878 34 H 0.164 0.836 35 H 0.177 0.823 36 H 0.106 0.894 37 H 0.397 0.603 38 H -0.276 1.276 39 H -0.301 1.301 40 H 0.188 0.812 41 H 0.193 0.807 42 H 0.160 0.840 43 H 0.128 0.872 44 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.648 -5.445 -6.887 10.439 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.322 3.678 5 O -0.417 6.417 6 C -0.125 4.125 7 H 0.170 0.830 8 C -0.156 4.156 9 C 0.072 3.928 10 F -0.166 7.166 11 C -0.788 4.788 12 S 2.689 3.311 13 O -0.945 6.945 14 O -0.950 6.950 15 O -0.621 6.621 16 C 0.001 3.999 17 C -0.079 4.079 18 Cl -0.015 7.015 19 C -0.100 4.100 20 C -0.195 4.195 21 O -0.351 6.351 22 Si 0.699 3.301 23 C -0.091 4.091 24 C -0.092 4.092 25 C -0.106 4.106 26 C -0.179 4.179 27 H 0.089 0.911 28 H 0.115 0.885 29 H 0.085 0.915 30 H 0.093 0.907 31 H 0.085 0.915 32 H 0.127 0.873 33 H 0.140 0.860 34 H 0.182 0.818 35 H 0.194 0.806 36 H 0.123 0.877 37 H 0.247 0.753 38 H -0.202 1.202 39 H -0.229 1.229 40 H 0.204 0.796 41 H 0.210 0.790 42 H 0.178 0.822 43 H 0.147 0.853 44 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -4.464 -5.492 -7.246 10.129 hybrid contribution 1.256 0.166 1.701 2.121 sum -3.208 -5.326 -5.545 8.331 Atomic orbital electron populations 1.21838 0.90808 1.04275 1.03736 1.23298 0.96841 0.79069 1.02773 1.86527 1.23900 1.33789 1.83287 1.23510 0.80760 0.92126 0.71407 1.90685 1.61039 1.43684 1.46311 1.22552 0.97048 0.91256 1.01674 0.83050 1.23579 0.93952 0.97226 1.00824 1.21417 0.96297 0.81753 0.93287 1.92981 1.97127 1.42609 1.83923 1.31751 1.10041 1.23669 1.13364 1.05555 0.73545 0.76650 0.75302 1.93626 1.45929 1.87191 1.67728 1.93632 1.82823 1.43357 1.75162 1.85774 1.67475 1.59570 1.49262 1.18203 1.05871 0.83729 0.92125 1.21217 1.01219 0.92751 0.92746 1.98417 1.74676 1.93959 1.34440 1.20462 0.99738 0.95801 0.93964 1.25454 0.97083 0.91204 1.05739 1.86576 1.23744 1.80321 1.44484 0.93889 0.88894 0.75032 0.72259 1.21705 0.94004 0.98380 0.94962 1.21734 0.96939 0.90821 0.99658 1.21784 0.94620 1.03414 0.90783 1.23855 0.95218 1.02033 0.96750 0.91050 0.88496 0.91537 0.90729 0.91462 0.87324 0.85992 0.81804 0.80556 0.87686 0.75259 1.20203 1.22930 0.79583 0.78990 0.82232 0.85337 0.86551 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.72 10.29 71.98 0.74 1.46 16 2 C 0.05 -0.04 6.19 71.98 0.45 0.41 16 3 O -0.36 -0.79 10.22 -51.41 -0.53 -1.32 16 4 C 0.48 1.41 7.48 71.24 0.53 1.94 16 5 O -0.53 -4.31 15.65 21.98 0.34 -3.96 16 6 C -0.11 0.13 4.24 -11.01 -0.05 0.08 16 7 H 0.15 -0.64 8.14 -2.39 -0.02 -0.66 16 8 C -0.12 0.10 6.86 31.12 0.21 0.31 16 9 C 0.09 0.12 1.62 -10.27 -0.02 0.10 16 10 F -0.19 -1.19 16.28 44.97 0.73 -0.45 16 11 C -0.66 -0.74 3.72 71.98 0.27 -0.48 16 12 S 2.59 18.51 4.89 -56.49 -0.28 18.23 16 13 O -0.95 -6.86 16.27 -118.57 -1.93 -8.79 16 14 O -0.95 -14.65 17.53 -118.57 -2.08 -16.73 16 15 O -0.66 -4.09 9.58 -61.82 -0.59 -4.68 16 16 C 0.04 0.09 4.79 22.52 0.11 0.20 16 17 C -0.05 0.00 5.61 22.41 0.13 0.12 16 18 Cl -0.04 -0.07 22.37 -2.72 -0.06 -0.13 16 19 C -0.10 0.49 5.26 -19.86 -0.10 0.39 16 20 C -0.09 0.43 2.09 71.24 0.15 0.58 16 21 O -0.54 2.44 12.84 -148.98 -1.91 0.53 16 22 Si 0.80 -6.43 29.91 68.60 2.05 -4.38 16 23 C -0.07 0.78 8.66 22.28 0.19 0.97 16 24 C -0.07 0.75 10.04 22.26 0.22 0.97 16 25 C -0.09 0.24 9.05 22.36 0.20 0.44 16 26 C -0.14 0.25 7.08 31.12 0.22 0.47 16 27 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 28 H 0.10 -0.75 8.14 -2.38 -0.02 -0.77 16 29 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 30 H 0.07 -0.10 8.13 -2.39 -0.02 -0.12 16 31 H 0.07 0.00 8.13 -2.39 -0.02 -0.02 16 32 H 0.11 -0.26 8.14 -2.39 -0.02 -0.28 16 33 H 0.12 -0.07 7.39 -2.39 -0.02 -0.09 16 34 H 0.16 -0.16 7.25 -2.39 -0.02 -0.17 16 35 H 0.18 -0.45 5.38 -2.39 -0.01 -0.46 16 36 H 0.11 -0.19 7.39 -2.39 -0.02 -0.21 16 37 H 0.40 -5.32 8.70 -74.05 -0.64 -5.96 16 38 H -0.28 1.07 7.11 99.48 0.71 1.78 16 39 H -0.30 -0.29 7.11 99.48 0.71 0.42 16 40 H 0.19 -3.43 5.12 -2.91 -0.01 -3.44 16 41 H 0.19 -3.39 8.06 -2.91 -0.02 -3.41 16 42 H 0.16 -0.71 8.06 -2.91 -0.02 -0.74 16 43 H 0.13 -0.61 7.91 -2.39 -0.02 -0.63 16 44 H 0.12 -0.35 8.14 -2.39 -0.02 -0.37 16 Total: 0.00 -29.00 393.12 -0.52 -29.53 By element: Atomic # 1 Polarization: -16.29 SS G_CDS: 0.47 Total: -15.82 kcal Atomic # 6 Polarization: 4.72 SS G_CDS: 3.25 Total: 7.97 kcal Atomic # 8 Polarization: -28.25 SS G_CDS: -6.69 Total: -34.95 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 0.73 Total: -0.45 kcal Atomic # 14 Polarization: -6.43 SS G_CDS: 2.05 Total: -4.38 kcal Atomic # 16 Polarization: 18.51 SS G_CDS: -0.28 Total: 18.23 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -0.06 Total: -0.13 kcal Total: -29.00 -0.52 -29.53 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10544596_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.401 kcal (2) G-P(sol) polarization free energy of solvation -29.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.527 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds