Wall clock time and date at job start Mon Mar 8 2021 11:06:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86302 * 1 3 3 C 1.86302 * 109.47005 * 2 1 4 4 C 1.86305 * 109.47104 * 240.00446 * 2 1 3 5 5 C 1.86293 * 109.47317 * 120.00198 * 2 1 3 6 6 C 1.52997 * 109.47155 * 59.99702 * 5 2 1 7 7 C 1.52998 * 109.47275 * 179.97438 * 6 5 2 8 8 S 1.81401 * 109.47224 * 180.02562 * 7 6 5 9 9 O 1.42103 * 110.53922 * 70.30999 * 8 7 6 10 10 O 1.42090 * 110.54538 * 293.56008 * 8 7 6 11 11 O 1.52203 * 104.45070 * 181.92984 * 8 7 6 12 12 C 1.35923 * 113.99367 * 73.58049 * 11 8 7 13 13 C 1.38671 * 120.03328 * 80.46687 * 12 11 8 14 14 C 1.38365 * 119.93117 * 180.02562 * 13 12 11 15 15 F 1.35108 * 119.99976 * 180.02562 * 14 13 12 16 16 C 1.38569 * 119.99966 * 359.97438 * 14 13 12 17 17 Cl 1.73599 * 119.97175 * 179.97438 * 16 14 13 18 18 C 1.38342 * 120.05733 * 0.02562 * 16 14 13 19 19 C 1.38140 * 120.06932 * 359.97438 * 18 16 14 20 20 C 1.50696 * 119.99642 * 179.97438 * 19 18 16 21 21 O 1.42911 * 109.46749 * 102.45060 * 20 19 18 22 22 Si 1.86293 * 109.47565 * 342.45225 * 20 19 18 23 23 H 1.48502 * 109.47238 * 59.99300 * 22 20 19 24 24 H 1.48500 * 109.47439 * 179.97438 * 22 20 19 25 25 H 1.48502 * 109.46758 * 299.99783 * 22 20 19 26 26 H 1.08995 * 109.47236 * 300.00053 * 1 2 3 27 27 H 1.09006 * 109.46933 * 59.99483 * 1 2 3 28 28 H 1.08995 * 109.46967 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.47507 * 179.97438 * 3 2 1 30 30 H 1.08997 * 109.47641 * 299.99878 * 3 2 1 31 31 H 1.09005 * 109.47018 * 60.00439 * 3 2 1 32 32 H 1.08994 * 109.46905 * 299.99465 * 4 2 1 33 33 H 1.08997 * 109.47336 * 60.00249 * 4 2 1 34 34 H 1.09001 * 109.46664 * 179.97438 * 4 2 1 35 35 H 1.09005 * 109.47274 * 299.99908 * 5 2 1 36 36 H 1.08993 * 109.47473 * 180.02562 * 5 2 1 37 37 H 1.09005 * 109.47096 * 60.00453 * 6 5 2 38 38 H 1.08993 * 109.47478 * 300.00668 * 6 5 2 39 39 H 1.09005 * 109.47102 * 60.00238 * 7 6 5 40 40 H 1.08995 * 109.47318 * 300.00275 * 7 6 5 41 41 H 1.07999 * 120.03274 * 0.03745 * 13 12 11 42 42 H 1.07999 * 119.96341 * 179.72297 * 18 16 14 43 43 H 1.09000 * 109.47530 * 222.44688 * 20 19 18 44 44 H 0.96695 * 113.99587 * 59.99702 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8781 -1.5212 5 6 2.4841 -0.8782 1.5210 6 6 1.9740 -2.3207 1.5210 7 6 2.4846 -3.0422 2.7699 8 16 1.8805 -4.7527 2.7695 9 8 2.5259 -5.5091 1.7544 10 8 0.4678 -4.7826 2.9191 11 8 2.4083 -5.3422 4.0697 12 6 1.7612 -4.8997 5.1800 13 6 0.5427 -5.4548 5.5407 14 6 -0.1145 -5.0024 6.6712 15 9 -1.3015 -5.5426 7.0242 16 6 0.4452 -3.9959 7.4418 17 17 -0.3803 -3.4284 8.8596 18 6 1.6608 -3.4423 7.0818 19 6 2.3192 -3.8920 5.9537 20 6 3.6430 -3.2874 5.5627 21 8 4.7001 -4.1747 5.9337 22 14 3.8643 -1.6578 6.4379 23 1 3.8344 -1.8765 7.9064 24 1 5.1691 -1.0623 6.0531 25 1 2.7659 -0.7358 6.0524 26 1 -0.3633 0.5138 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 3.5740 1.7566 0.0005 30 1 2.1207 2.2704 -0.8899 31 1 2.1207 2.2703 0.8901 32 1 2.1208 -1.9058 -1.5212 33 1 2.1208 -0.3642 -2.4112 34 1 3.5740 -0.8777 -1.5214 35 1 2.1207 -0.3644 2.4111 36 1 3.5740 -0.8779 1.5213 37 1 2.3374 -2.8346 0.6310 38 1 0.8841 -2.3207 1.5210 39 1 2.1216 -2.5285 3.6602 40 1 3.5745 -3.0422 2.7694 41 1 0.1072 -6.2396 4.9400 42 1 2.0936 -2.6549 7.6810 43 1 3.6650 -3.1268 4.4848 44 1 4.6486 -5.0445 5.5145 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10548610_14927650.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:06:54 Heat of formation + Delta-G solvation = -202.659586 kcal Electronic energy + Delta-G solvation = -30380.402744 eV Core-core repulsion = 25910.939377 eV Total energy + Delta-G solvation = -4469.463367 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 384.063 amu Computer time = 6.01 seconds Orbital eigenvalues (eV) -50.30733 -42.83970 -39.84773 -38.52528 -38.22192 -37.52325 -37.38057 -36.19439 -33.10564 -31.81366 -29.86631 -28.80645 -28.50546 -28.50181 -27.14660 -25.47870 -23.69094 -23.29233 -21.89258 -20.10223 -19.32615 -19.21772 -18.78109 -18.08967 -17.94227 -17.40680 -17.07502 -16.82643 -16.46785 -16.03851 -15.85768 -15.60373 -15.17709 -15.00898 -14.72776 -14.40725 -14.29002 -14.26745 -14.18245 -14.03851 -13.94973 -13.78434 -13.76611 -13.54223 -13.42464 -13.34892 -13.33237 -13.25911 -13.22789 -13.18091 -12.70956 -12.46946 -12.43942 -12.15352 -12.12129 -12.08220 -11.77388 -11.37065 -10.93179 -10.89828 -10.71993 -10.56636 -10.15422 -1.46213 -0.70997 -0.58335 0.51898 0.66436 0.78862 1.20077 1.25404 1.58295 1.60723 1.69882 1.74317 1.75992 2.28815 2.43450 2.50413 2.62599 2.84402 3.03670 3.08270 3.29122 3.36794 3.46307 3.50740 3.71216 3.85821 3.95428 4.05866 4.15860 4.23647 4.30895 4.33424 4.44658 4.50483 4.62750 4.63876 4.67098 4.67881 4.68671 4.69699 4.76678 4.99410 5.12015 5.38683 5.46562 5.48217 6.21924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.454 4.454 2 Si 1.003 2.997 3 C -0.449 4.449 4 C -0.454 4.454 5 C -0.409 4.409 6 C -0.100 4.100 7 C -0.658 4.658 8 S 2.579 3.421 9 O -0.912 6.912 10 O -0.941 6.941 11 O -0.658 6.658 12 C 0.106 3.894 13 C -0.110 4.110 14 C 0.138 3.862 15 F -0.108 7.108 16 C -0.053 4.053 17 Cl -0.021 7.021 18 C -0.072 4.072 19 C -0.114 4.114 20 C -0.112 4.112 21 O -0.524 6.524 22 Si 0.992 3.008 23 H -0.238 1.238 24 H -0.240 1.240 25 H -0.234 1.234 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.070 0.930 33 H 0.070 0.930 34 H 0.070 0.930 35 H 0.083 0.917 36 H 0.084 0.916 37 H 0.085 0.915 38 H 0.085 0.915 39 H 0.138 0.862 40 H 0.148 0.852 41 H 0.171 0.829 42 H 0.162 0.838 43 H 0.084 0.916 44 H 0.377 0.623 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.475 4.514 0.202 4.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.561 4.561 2 Si 1.199 2.801 3 C -0.557 4.557 4 C -0.561 4.561 5 C -0.495 4.495 6 C -0.139 4.139 7 C -0.785 4.785 8 S 2.675 3.325 9 O -0.910 6.910 10 O -0.939 6.939 11 O -0.616 6.616 12 C 0.064 3.936 13 C -0.131 4.131 14 C 0.117 3.883 15 F -0.086 7.086 16 C -0.081 4.081 17 Cl 0.009 6.991 18 C -0.090 4.090 19 C -0.117 4.117 20 C -0.219 4.219 21 O -0.330 6.330 22 Si 0.808 3.192 23 H -0.162 1.162 24 H -0.163 1.163 25 H -0.157 1.157 26 H 0.089 0.911 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.089 0.911 35 H 0.102 0.898 36 H 0.103 0.897 37 H 0.103 0.897 38 H 0.104 0.896 39 H 0.156 0.844 40 H 0.166 0.834 41 H 0.189 0.811 42 H 0.180 0.820 43 H 0.101 0.899 44 H 0.226 0.774 Dipole moment (debyes) X Y Z Total from point charges 1.504 5.041 0.909 5.339 hybrid contribution -0.235 -0.759 -0.430 0.904 sum 1.268 4.282 0.479 4.491 Atomic orbital electron populations 1.26180 1.20662 1.04623 1.04645 0.79315 0.67267 0.67077 0.66400 1.26106 1.06270 1.18775 1.04553 1.26178 1.06396 1.08151 1.15387 1.26192 1.06497 1.00278 1.16520 1.21002 1.01895 0.97051 0.93941 1.31214 1.13795 1.24320 1.09147 1.06051 0.75062 0.77508 0.73882 1.93694 1.76490 1.67052 1.53763 1.93684 1.30525 1.86192 1.83537 1.85773 1.70571 1.74906 1.30370 1.17432 0.91860 0.96716 0.87584 1.21367 0.93938 1.01599 0.96208 1.16955 0.83510 0.93893 0.93921 1.91645 1.41917 1.83987 1.91012 1.21139 0.95816 0.98154 0.93017 1.98453 1.77325 1.87598 1.35772 1.20866 0.92430 1.00159 0.95576 1.20445 0.98513 0.96927 0.95839 1.25915 0.84412 1.05351 1.06233 1.86748 1.45708 1.28055 1.72456 0.84736 0.82582 0.71546 0.80340 1.16157 1.16287 1.15714 0.91141 0.91081 0.91116 0.91210 0.91122 0.91234 0.91120 0.91080 0.91108 0.89835 0.89716 0.89679 0.89597 0.84356 0.83413 0.81139 0.82036 0.89858 0.77449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.09 8.65 101.05 0.87 1.96 16 2 Si 1.00 -3.89 12.19 -169.99 -2.07 -5.97 16 3 C -0.45 1.17 8.65 101.05 0.87 2.05 16 4 C -0.45 1.08 8.65 101.05 0.87 1.96 16 5 C -0.41 1.61 4.45 37.16 0.17 1.78 16 6 C -0.10 0.30 4.59 -26.73 -0.12 0.18 16 7 C -0.66 2.11 4.00 37.16 0.15 2.26 16 8 S 2.58 0.47 5.16 -107.50 -0.55 -0.09 16 9 O -0.91 -3.17 18.09 -67.04 -1.21 -4.38 16 10 O -0.94 -1.96 15.67 -67.04 -1.05 -3.01 16 11 O -0.66 0.27 9.25 -51.82 -0.48 -0.21 16 12 C 0.11 -0.04 4.90 -39.23 -0.19 -0.23 16 13 C -0.11 -0.02 8.51 -39.37 -0.34 -0.36 16 14 C 0.14 0.07 7.27 -39.41 -0.29 -0.22 16 15 F -0.11 -0.16 16.83 2.25 0.04 -0.12 16 16 C -0.05 0.01 6.33 -39.42 -0.25 -0.24 16 17 Cl -0.02 0.00 28.61 -51.86 -1.48 -1.48 16 18 C -0.07 0.10 8.44 -39.58 -0.33 -0.24 16 19 C -0.11 0.15 4.57 -104.47 -0.48 -0.32 16 20 C -0.11 0.25 1.93 36.00 0.07 0.32 16 21 O -0.52 0.67 12.65 -35.23 -0.45 0.23 16 22 Si 0.99 -2.30 25.85 -169.99 -4.39 -6.70 16 23 H -0.24 0.47 6.65 56.52 0.38 0.84 16 24 H -0.24 0.33 7.11 56.52 0.40 0.74 16 25 H -0.23 0.83 7.11 56.52 0.40 1.24 16 26 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 28 H 0.07 -0.16 7.79 -51.93 -0.40 -0.57 16 29 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 30 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 31 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 32 H 0.07 -0.16 7.79 -51.93 -0.40 -0.57 16 33 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 34 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 35 H 0.08 -0.39 7.96 -51.93 -0.41 -0.80 16 36 H 0.08 -0.40 7.96 -51.93 -0.41 -0.81 16 37 H 0.08 -0.32 7.79 -51.93 -0.40 -0.72 16 38 H 0.09 -0.32 7.79 -51.93 -0.40 -0.73 16 39 H 0.14 -0.70 6.45 -51.92 -0.33 -1.04 16 40 H 0.15 -0.82 6.98 -51.93 -0.36 -1.18 16 41 H 0.17 -0.10 7.80 -52.49 -0.41 -0.51 16 42 H 0.16 -0.48 4.92 -52.49 -0.26 -0.74 16 43 H 0.08 -0.36 3.35 -51.93 -0.17 -0.54 16 44 H 0.38 -1.28 8.92 45.56 0.41 -0.88 16 LS Contribution 387.38 15.07 5.84 5.84 Total: 0.00 -7.20 387.38 -10.10 -17.31 By element: Atomic # 1 Polarization: -5.01 SS G_CDS: -5.29 Total: -10.30 kcal Atomic # 6 Polarization: 7.89 SS G_CDS: 1.01 Total: 8.89 kcal Atomic # 8 Polarization: -4.19 SS G_CDS: -3.19 Total: -7.37 kcal Atomic # 9 Polarization: -0.16 SS G_CDS: 0.04 Total: -0.12 kcal Atomic # 14 Polarization: -6.20 SS G_CDS: -6.47 Total: -12.67 kcal Atomic # 16 Polarization: 0.47 SS G_CDS: -0.55 Total: -0.09 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -1.48 Total: -1.48 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -7.20 -10.10 -17.31 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10548610_14927650.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -185.355 kcal (2) G-P(sol) polarization free energy of solvation -7.202 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -192.556 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.103 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.305 kcal (6) G-S(sol) free energy of system = (1) + (5) -202.660 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 6.01 seconds