Wall clock time and date at job start Mon Mar 8 2021 08:08:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86297 * 109.47029 * 2 1 4 4 C 1.50699 * 109.47222 * 119.99951 * 2 1 3 5 5 C 1.38706 * 119.99581 * 75.00088 * 4 2 1 6 6 O 1.35921 * 120.03321 * 359.97438 * 5 4 2 7 7 S 1.52200 * 113.99862 * 89.99796 * 6 5 4 8 8 O 1.42097 * 104.28078 * 318.93013 * 7 6 5 9 9 O 1.42099 * 104.27691 * 191.07224 * 7 6 5 10 10 C 1.81406 * 104.44879 * 75.00231 * 7 6 5 11 11 H 1.09007 * 112.84975 * 53.80124 * 10 7 6 12 12 C 1.53783 * 113.61389 * 184.99981 * 10 7 6 13 13 C 1.53777 * 87.07939 * 139.97992 * 12 10 7 14 14 H 1.08997 * 113.61338 * 219.93250 * 13 12 10 15 15 O 1.42901 * 113.61283 * 89.11693 * 13 12 10 16 16 C 1.42905 * 114.00134 * 151.52697 * 15 13 12 17 17 C 1.50703 * 109.47264 * 179.97438 * 16 15 13 18 18 C 1.38237 * 119.99944 * 269.72694 * 17 16 15 19 19 C 1.38237 * 119.99768 * 179.78788 * 18 17 16 20 20 C 1.38232 * 119.99839 * 0.44105 * 19 18 17 21 21 C 1.38236 * 120.00279 * 359.81168 * 20 19 18 22 22 C 1.38227 * 119.99868 * 90.00146 * 17 16 15 23 23 C 1.53776 * 87.17366 * 334.52531 * 13 12 10 24 24 C 1.38719 * 119.93935 * 180.24984 * 5 4 2 25 25 C 1.38336 * 119.92718 * 359.45591 * 24 5 4 26 26 F 1.35102 * 119.99919 * 180.25203 * 25 24 5 27 27 C 1.38609 * 119.99660 * 0.54148 * 25 24 5 28 28 Cl 1.73596 * 119.96777 * 179.70419 * 27 25 24 29 29 C 1.38190 * 119.99789 * 254.98108 * 4 2 1 30 30 H 0.96705 * 114.00000 * 179.97438 * 1 2 3 31 31 H 1.09005 * 109.47039 * 240.00288 * 2 1 3 32 32 H 1.48497 * 110.00066 * 58.68137 * 3 2 1 33 33 H 1.48503 * 110.00222 * 179.97438 * 3 2 1 34 34 H 1.09003 * 113.61394 * 25.42894 * 12 10 7 35 35 H 1.09009 * 113.68678 * 254.54307 * 12 10 7 36 36 H 1.09001 * 109.47103 * 300.00246 * 16 15 13 37 37 H 1.09004 * 109.47054 * 59.99750 * 16 15 13 38 38 H 1.08000 * 119.99953 * 0.02562 * 18 17 16 39 39 H 1.07999 * 119.99755 * 180.27437 * 19 18 17 40 40 H 1.08001 * 119.99982 * 179.83262 * 20 19 18 41 41 H 1.07997 * 120.00219 * 179.97438 * 21 20 19 42 42 H 1.08005 * 120.00195 * 359.97438 * 22 17 16 43 43 H 1.09005 * 113.61632 * 140.02642 * 23 13 12 44 44 H 1.09003 * 113.61463 * 270.92030 * 23 13 12 45 45 H 1.08000 * 120.03725 * 179.70153 * 24 5 4 46 46 H 1.07999 * 119.96756 * 359.97438 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.8694 -2.0940 1.3062 6 8 1.3553 -2.8096 0.2713 7 16 2.3871 -3.2233 -0.7682 8 8 3.2167 -2.0789 -0.9134 9 8 1.6130 -3.7097 -1.8560 10 6 3.3030 -4.5780 0.0172 11 1 2.6530 -5.3761 0.3762 12 6 4.4937 -5.0809 -0.8159 13 6 5.2716 -5.1895 0.5061 14 1 6.3110 -4.8707 0.4285 15 8 5.1263 -6.4552 1.1535 16 6 6.2473 -6.8292 1.9570 17 6 5.9867 -8.1723 2.5889 18 6 5.3752 -8.2470 3.8264 19 6 5.1322 -9.4792 4.4040 20 6 5.5089 -10.6363 3.7482 21 6 6.1250 -10.5614 2.5130 22 6 6.3642 -9.3293 1.9335 23 6 4.3338 -4.1035 1.0590 24 6 2.3274 -2.7464 2.4416 25 6 2.8554 -2.0164 3.4913 26 9 3.3065 -2.6506 4.5956 27 6 2.9160 -0.6338 3.4126 28 17 3.5716 0.2820 4.7336 29 6 2.4541 0.0167 2.2830 30 1 -0.3933 -0.8834 -0.0004 31 1 1.7923 -0.5138 -0.8900 32 1 1.5354 2.4771 1.1921 33 1 3.5349 1.7702 0.0006 34 1 4.8957 -4.3327 -1.4990 35 1 4.3158 -6.0422 -1.2982 36 1 7.1386 -6.8879 1.3324 37 1 6.3993 -6.0840 2.7379 38 1 5.0839 -7.3428 4.3403 39 1 4.6505 -9.5377 5.3688 40 1 5.3215 -11.5989 4.2006 41 1 6.4197 -11.4654 2.0008 42 1 6.8455 -9.2708 0.9684 43 1 4.0257 -4.2762 2.0903 44 1 4.6923 -3.0885 0.8877 45 1 2.2754 -3.8233 2.5042 46 1 2.5027 1.0939 2.2230 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_10548610_15608174.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:08:07 Heat of formation + Delta-G solvation = -119.575381 kcal Electronic energy + Delta-G solvation = -38386.586423 eV Core-core repulsion = 33085.582066 eV Total energy + Delta-G solvation = -5301.004357 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 429.062 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -50.41546 -42.87157 -40.85570 -40.01226 -39.81697 -38.63640 -38.15419 -37.66760 -37.42883 -37.06572 -33.14309 -32.71672 -31.84589 -31.81940 -27.64805 -27.27679 -27.09346 -26.56716 -25.28778 -23.69854 -23.53964 -22.33294 -22.23878 -21.19791 -20.17365 -19.54582 -19.22918 -18.71651 -18.49902 -17.99941 -17.77355 -17.57054 -17.34098 -17.08135 -16.72074 -16.63492 -16.39046 -16.23564 -15.89078 -15.77222 -15.50737 -15.36692 -14.85941 -14.77784 -14.57771 -14.34763 -14.25353 -14.18383 -14.12193 -14.04222 -13.80203 -13.72033 -13.64200 -13.58113 -13.45798 -13.32933 -13.22001 -12.76718 -12.49404 -12.24923 -12.20893 -12.11466 -11.92502 -11.80540 -11.64984 -11.35750 -11.24960 -10.76362 -10.47601 -10.16287 -9.88144 -9.82411 -4.91634 -1.45405 -0.69896 -0.65442 0.27154 0.44148 0.46181 0.63219 1.20124 1.51686 1.64054 1.76995 2.17927 2.34247 2.44741 2.46435 2.88917 2.90092 2.97810 3.03825 3.07335 3.23058 3.38957 3.47396 3.63543 3.73350 3.82764 3.87067 3.88863 4.04148 4.09547 4.14491 4.17660 4.19894 4.24731 4.28583 4.30348 4.33550 4.41039 4.51490 4.53817 4.59329 4.67355 4.71069 4.75211 4.79845 4.97149 5.02974 5.09691 5.49526 5.57073 5.58961 6.03411 6.12875 6.35887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.120 4.120 3 Si 0.801 3.199 4 C -0.088 4.088 5 C 0.105 3.895 6 O -0.659 6.659 7 S 2.587 3.413 8 O -0.955 6.955 9 O -0.956 6.956 10 C -0.618 4.618 11 H 0.176 0.824 12 C -0.115 4.115 13 C 0.080 3.920 14 H 0.110 0.890 15 O -0.371 6.371 16 C 0.100 3.900 17 C -0.107 4.107 18 C -0.111 4.111 19 C -0.135 4.135 20 C -0.125 4.125 21 C -0.135 4.135 22 C -0.112 4.112 23 C -0.145 4.145 24 C -0.133 4.133 25 C 0.134 3.866 26 F -0.109 7.109 27 C -0.055 4.055 28 Cl -0.024 7.024 29 C -0.076 4.076 30 H 0.376 0.624 31 H 0.089 0.911 32 H -0.260 1.260 33 H -0.249 1.249 34 H 0.121 0.879 35 H 0.104 0.896 36 H 0.074 0.926 37 H 0.074 0.926 38 H 0.134 0.866 39 H 0.137 0.863 40 H 0.137 0.863 41 H 0.137 0.863 42 H 0.133 0.867 43 H 0.108 0.892 44 H 0.119 0.881 45 H 0.196 0.804 46 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.163 -1.283 1.333 4.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.227 4.227 3 Si 0.698 3.302 4 C -0.092 4.092 5 C 0.063 3.937 6 O -0.618 6.618 7 S 2.688 3.312 8 O -0.953 6.953 9 O -0.954 6.954 10 C -0.729 4.729 11 H 0.194 0.806 12 C -0.154 4.154 13 C 0.021 3.979 14 H 0.127 0.873 15 O -0.291 6.291 16 C 0.025 3.975 17 C -0.107 4.107 18 C -0.129 4.129 19 C -0.153 4.153 20 C -0.143 4.143 21 C -0.153 4.153 22 C -0.130 4.130 23 C -0.184 4.184 24 C -0.153 4.153 25 C 0.114 3.886 26 F -0.087 7.087 27 C -0.083 4.083 28 Cl 0.005 6.995 29 C -0.095 4.095 30 H 0.225 0.775 31 H 0.106 0.894 32 H -0.186 1.186 33 H -0.173 1.173 34 H 0.140 0.860 35 H 0.122 0.878 36 H 0.093 0.907 37 H 0.092 0.908 38 H 0.152 0.848 39 H 0.155 0.845 40 H 0.155 0.845 41 H 0.155 0.845 42 H 0.151 0.849 43 H 0.127 0.873 44 H 0.138 0.862 45 H 0.213 0.787 46 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 4.162 0.300 1.354 4.387 hybrid contribution 0.042 -2.365 1.114 2.614 sum 4.205 -2.065 2.468 5.295 Atomic orbital electron populations 1.86735 1.16225 1.34267 1.96971 1.25953 0.85196 1.16839 0.94667 0.91826 0.77776 0.73912 0.86694 1.20598 0.98484 0.92349 0.97724 1.17463 1.00535 0.88703 0.86976 1.85705 1.58796 1.72867 1.44385 1.05782 0.74015 0.77012 0.74435 1.93625 1.70265 1.46310 1.85094 1.93631 1.68512 1.82746 1.50548 1.32128 1.10466 1.18490 1.11847 0.80602 1.23065 0.91211 1.04459 0.96643 1.22855 0.99544 0.83722 0.91778 0.87265 1.87952 1.41455 1.35474 1.64197 1.21524 0.88887 0.92847 0.94284 1.19798 1.00874 0.94707 0.95368 1.21319 0.97684 0.98630 0.95277 1.21465 1.00329 0.92575 1.00929 1.21536 0.97881 0.99405 0.95437 1.21467 0.99335 0.98366 0.96116 1.21327 0.99459 0.92197 0.99979 1.23749 0.94373 1.01205 0.99045 1.21482 0.99289 1.03825 0.90721 1.16798 0.99138 0.87895 0.84806 1.91639 1.86116 1.81490 1.49499 1.21162 1.03066 0.91195 0.92909 1.98450 1.83571 1.72901 1.44582 1.20832 0.96911 1.01358 0.90364 0.77544 0.89361 1.18553 1.17349 0.86039 0.87762 0.90738 0.90812 0.84822 0.84500 0.84539 0.84499 0.84881 0.87344 0.86249 0.78729 0.82134 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.11 12.65 -148.98 -1.89 -3.99 16 2 C -0.12 -0.41 2.19 71.24 0.16 -0.26 16 3 Si 0.80 0.11 30.40 68.60 2.09 2.20 16 4 C -0.09 -0.23 4.68 -19.76 -0.09 -0.32 16 5 C 0.11 0.04 4.56 22.50 0.10 0.14 16 6 O -0.66 -0.69 9.04 -61.76 -0.56 -1.24 16 7 S 2.59 4.51 4.91 -56.49 -0.28 4.23 16 8 O -0.95 -3.53 13.56 -118.57 -1.61 -5.13 16 9 O -0.96 -9.28 18.09 -118.57 -2.15 -11.43 16 10 C -0.62 2.81 3.92 31.21 0.12 2.93 16 11 H 0.18 -1.20 8.14 -2.38 -0.02 -1.22 16 12 C -0.12 0.62 7.50 31.12 0.23 0.86 16 13 C 0.08 -0.48 4.36 31.12 0.14 -0.35 16 14 H 0.11 -1.06 7.88 -2.39 -0.02 -1.08 16 15 O -0.37 0.70 10.25 -148.98 -1.53 -0.83 16 16 C 0.10 -0.36 5.91 71.24 0.42 0.06 16 17 C -0.11 -0.03 5.51 -19.87 -0.11 -0.14 16 18 C -0.11 -0.03 9.70 22.27 0.22 0.19 16 19 C -0.14 -0.04 10.05 22.27 0.22 0.19 16 20 C -0.12 -0.04 10.05 22.27 0.22 0.18 16 21 C -0.13 -0.06 10.05 22.27 0.22 0.17 16 22 C -0.11 -0.06 9.70 22.27 0.22 0.15 16 23 C -0.15 0.98 5.17 31.21 0.16 1.14 16 24 C -0.13 0.46 6.68 22.41 0.15 0.61 16 25 C 0.13 -0.19 7.27 22.38 0.16 -0.03 16 26 F -0.11 0.10 16.83 44.97 0.76 0.86 16 27 C -0.05 -0.03 6.33 22.37 0.14 0.11 16 28 Cl -0.02 -0.03 28.61 -2.72 -0.08 -0.10 16 29 C -0.08 -0.12 8.44 22.27 0.19 0.07 16 30 H 0.38 0.13 8.60 -74.05 -0.64 -0.50 16 31 H 0.09 0.34 5.42 -2.38 -0.01 0.33 16 32 H -0.26 -0.63 6.81 99.48 0.68 0.05 16 33 H -0.25 -0.49 7.11 99.48 0.71 0.22 16 34 H 0.12 -1.01 8.10 -2.39 -0.02 -1.03 16 35 H 0.10 -0.54 8.14 -2.38 -0.02 -0.56 16 36 H 0.07 -0.45 8.09 -2.39 -0.02 -0.47 16 37 H 0.07 -0.45 8.08 -2.38 -0.02 -0.47 16 38 H 0.13 -0.40 8.06 -2.91 -0.02 -0.42 16 39 H 0.14 -0.44 8.06 -2.91 -0.02 -0.46 16 40 H 0.14 -0.44 8.06 -2.91 -0.02 -0.46 16 41 H 0.14 -0.42 8.06 -2.91 -0.02 -0.44 16 42 H 0.13 -0.33 8.06 -2.91 -0.02 -0.35 16 43 H 0.11 -0.95 5.98 -2.38 -0.01 -0.96 16 44 H 0.12 -0.93 7.54 -2.39 -0.02 -0.95 16 45 H 0.20 -1.79 6.61 -2.91 -0.02 -1.81 16 46 H 0.16 0.06 4.93 -2.91 -0.01 0.04 16 Total: 0.00 -18.39 408.12 -1.93 -20.32 By element: Atomic # 1 Polarization: -10.99 SS G_CDS: 0.44 Total: -10.56 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: 2.88 Total: 5.69 kcal Atomic # 8 Polarization: -14.91 SS G_CDS: -7.72 Total: -22.63 kcal Atomic # 9 Polarization: 0.10 SS G_CDS: 0.76 Total: 0.86 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: 2.09 Total: 2.20 kcal Atomic # 16 Polarization: 4.51 SS G_CDS: -0.28 Total: 4.23 kcal Atomic # 17 Polarization: -0.03 SS G_CDS: -0.08 Total: -0.10 kcal Total: -18.39 -1.93 -20.32 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10548610_15608174.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.259 kcal (2) G-P(sol) polarization free energy of solvation -18.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.650 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.316 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.575 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds