Wall clock time and date at job start Mon Mar 8 2021 08:19:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45198 * 109.47099 * 2 1 4 4 C 1.34229 * 116.99977 * 180.02562 * 3 2 1 5 5 O 1.20833 * 120.00028 * 359.97438 * 4 3 2 6 6 C 1.50700 * 120.00168 * 180.02562 * 4 3 2 7 7 H 1.09002 * 109.46974 * 299.99919 * 6 4 3 8 8 C 1.53005 * 109.47278 * 59.99896 * 6 4 3 9 9 C 1.53000 * 109.47158 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.46919 * 299.99800 * 9 8 6 11 11 F 1.39907 * 109.46626 * 180.02562 * 10 9 8 12 12 C 1.52993 * 109.47137 * 299.99779 * 10 9 8 13 13 S 1.81400 * 109.47544 * 305.00471 * 12 10 9 14 14 O 1.42098 * 110.53959 * 297.39305 * 13 12 10 15 15 O 1.42092 * 110.54211 * 74.14622 * 13 12 10 16 16 O 1.52207 * 104.44895 * 185.77437 * 13 12 10 17 17 C 1.35915 * 113.99919 * 76.77635 * 16 13 12 18 18 C 1.38709 * 120.03126 * 97.09102 * 17 16 13 19 19 C 1.50698 * 119.99956 * 359.97438 * 18 17 16 20 20 O 1.42900 * 109.46921 * 283.90311 * 19 18 17 21 21 Si 1.86298 * 109.47308 * 163.90110 * 19 18 17 22 22 C 1.38192 * 120.00304 * 179.71943 * 18 17 16 23 23 C 1.38293 * 120.06631 * 0.54602 * 22 18 17 24 24 Cl 1.73600 * 119.96757 * 179.70074 * 23 22 18 25 25 C 1.38611 * 120.06060 * 359.73051 * 23 22 18 26 26 F 1.35100 * 119.99907 * 179.97438 * 25 23 22 27 27 C 1.38325 * 119.99926 * 359.97438 * 25 23 22 28 28 C 1.52998 * 109.47450 * 60.00345 * 10 9 8 29 29 C 1.52999 * 109.47327 * 179.97438 * 6 4 3 30 30 H 1.08997 * 109.47624 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47033 * 300.00110 * 1 2 3 32 32 H 1.08998 * 109.47593 * 59.99698 * 1 2 3 33 33 H 1.09000 * 109.47033 * 239.99889 * 2 1 3 34 34 H 1.08998 * 109.47593 * 120.00302 * 2 1 3 35 35 H 1.09006 * 109.46578 * 300.00372 * 8 6 4 36 36 H 1.08994 * 109.47005 * 59.99813 * 8 6 4 37 37 H 1.09000 * 109.46580 * 179.97438 * 9 8 6 38 38 H 1.09002 * 109.47138 * 59.99996 * 9 8 6 39 39 H 1.09000 * 109.46925 * 65.00763 * 12 10 9 40 40 H 1.09007 * 109.47366 * 184.99797 * 12 10 9 41 41 H 1.09004 * 109.47173 * 43.90090 * 19 18 17 42 42 H 0.96701 * 113.99689 * 299.99945 * 20 19 18 43 43 H 1.48498 * 109.99721 * 58.68004 * 21 19 18 44 44 H 1.48500 * 109.99836 * 179.97438 * 21 19 18 45 45 H 1.07999 * 119.96925 * 180.25984 * 22 18 17 46 46 H 1.07993 * 120.03908 * 180.02562 * 27 25 23 47 47 H 1.09002 * 109.47071 * 59.99519 * 28 10 9 48 48 H 1.08998 * 109.47533 * 179.97438 * 28 10 9 49 49 H 1.08995 * 109.47216 * 59.99510 * 29 6 4 50 50 H 1.09002 * 109.47143 * 299.99957 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.5843 3.4700 -0.8895 8 6 3.4498 3.6837 1.2499 9 6 4.0341 5.0977 1.2501 10 6 5.5620 5.0181 1.2491 11 9 6.0963 6.3111 1.2499 12 6 6.0346 4.2708 2.4977 13 16 5.3530 5.0714 3.9759 14 8 5.8338 6.4039 4.0878 15 8 3.9689 4.7785 4.1082 16 8 6.0048 4.3383 5.1396 17 6 7.2943 4.7015 5.3692 18 6 7.5871 5.6430 6.3448 19 6 6.4752 6.2642 7.1503 20 8 5.7968 7.2378 6.3542 21 14 7.1882 7.0860 8.6626 22 6 8.8988 6.0076 6.5817 23 6 9.9198 5.4430 5.8392 24 17 11.5660 5.9087 6.1336 25 6 9.6298 4.5061 4.8597 26 9 10.6281 3.9557 4.1347 27 6 8.3182 4.1347 4.6245 28 6 6.0330 4.2719 -0.0008 29 6 5.4486 2.8573 -0.0001 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5139 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 1.8933 -0.5139 -0.8900 34 1 1.8934 -0.5139 0.8899 35 1 2.3612 3.7407 1.2504 36 1 3.7861 3.1510 2.1394 37 1 3.6982 5.6294 2.1404 38 1 3.6974 5.6301 0.3606 39 1 5.6920 3.2370 2.4538 40 1 7.1235 4.2910 2.5429 41 1 5.7712 5.4899 7.4554 42 1 6.3635 7.9586 6.0468 43 1 8.1733 8.1220 8.2608 44 1 6.1017 7.7029 9.4652 45 1 9.1265 6.7377 7.3443 46 1 8.0916 3.4045 3.8618 47 1 5.6963 4.8043 -0.8903 48 1 7.1215 4.2155 -0.0017 49 1 5.7845 2.3255 -0.8903 50 1 5.7846 2.3248 0.8896 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10548610_16464696.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:19:16 Heat of formation + Delta-G solvation = -278.057070 kcal Electronic energy + Delta-G solvation = -44523.350280 eV Core-core repulsion = 38500.940657 eV Total energy + Delta-G solvation = -6022.409623 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 455.084 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -50.39865 -49.05145 -42.73771 -41.84812 -39.84273 -39.69712 -38.35588 -38.11166 -37.61535 -37.53746 -37.16346 -33.73287 -33.04709 -32.58245 -32.26581 -31.78744 -29.43165 -27.11989 -25.61124 -25.30727 -24.36623 -23.71881 -23.58212 -22.25905 -21.86135 -20.71003 -19.81887 -19.36290 -19.25321 -18.77026 -18.58292 -18.22727 -17.93581 -17.82265 -17.64992 -17.36882 -17.19092 -16.91722 -16.83661 -16.29026 -16.27434 -16.00974 -15.77233 -15.52343 -15.43394 -15.27657 -15.10350 -15.03591 -14.56897 -14.42996 -14.26557 -14.14217 -14.08255 -13.88163 -13.85335 -13.74582 -13.63161 -13.29148 -13.26100 -13.17851 -13.14456 -12.94163 -12.92668 -12.81553 -12.72790 -12.59651 -12.55988 -12.46711 -12.20185 -12.01269 -11.91419 -11.77393 -11.54167 -11.38317 -11.30688 -10.77460 -10.63308 -10.11230 -5.11238 -1.41717 -0.67072 -0.62580 0.54104 0.75967 1.03831 1.11681 1.40843 1.55684 1.58932 1.83617 2.24991 2.48943 2.64858 2.69102 2.87267 2.93085 2.98885 3.04368 3.12726 3.23496 3.32136 3.33761 3.50815 3.54974 3.65549 3.78580 3.81213 3.85174 3.92828 3.96373 3.97924 4.01782 4.05711 4.09051 4.18531 4.25970 4.31361 4.32340 4.33236 4.43365 4.56449 4.59984 4.64918 4.67808 4.71328 4.77334 4.78613 4.91822 4.98139 4.99376 5.01776 5.42451 6.41625 6.67921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.467 3.533 5 O -0.505 6.505 6 C -0.087 4.087 7 H 0.119 0.881 8 C -0.111 4.111 9 C -0.167 4.167 10 C 0.143 3.857 11 F -0.188 7.188 12 C -0.705 4.705 13 S 2.593 3.407 14 O -0.907 6.907 15 O -0.907 6.907 16 O -0.657 6.657 17 C 0.132 3.868 18 C -0.086 4.086 19 C -0.093 4.093 20 O -0.504 6.504 21 Si 0.693 3.307 22 C -0.067 4.067 23 C -0.057 4.057 24 Cl -0.021 7.021 25 C 0.144 3.856 26 F -0.109 7.109 27 C -0.171 4.171 28 C -0.129 4.129 29 C -0.108 4.108 30 H 0.082 0.918 31 H 0.069 0.931 32 H 0.068 0.932 33 H 0.071 0.929 34 H 0.071 0.929 35 H 0.100 0.900 36 H 0.075 0.925 37 H 0.087 0.913 38 H 0.106 0.894 39 H 0.160 0.840 40 H 0.148 0.852 41 H 0.129 0.871 42 H 0.385 0.615 43 H -0.250 1.250 44 H -0.245 1.245 45 H 0.166 0.834 46 H 0.165 0.835 47 H 0.092 0.908 48 H 0.090 0.910 49 H 0.089 0.911 50 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.906 -1.669 0.145 1.905 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.309 3.691 5 O -0.392 6.392 6 C -0.106 4.106 7 H 0.137 0.863 8 C -0.148 4.148 9 C -0.204 4.204 10 C 0.124 3.876 11 F -0.168 7.168 12 C -0.829 4.829 13 S 2.686 3.314 14 O -0.906 6.906 15 O -0.906 6.906 16 O -0.615 6.615 17 C 0.090 3.910 18 C -0.089 4.089 19 C -0.202 4.202 20 O -0.312 6.312 21 Si 0.592 3.408 22 C -0.086 4.086 23 C -0.085 4.085 24 Cl 0.008 6.992 25 C 0.123 3.877 26 F -0.087 7.087 27 C -0.192 4.192 28 C -0.167 4.167 29 C -0.146 4.146 30 H 0.100 0.900 31 H 0.088 0.912 32 H 0.087 0.913 33 H 0.089 0.911 34 H 0.090 0.910 35 H 0.119 0.881 36 H 0.094 0.906 37 H 0.105 0.895 38 H 0.124 0.876 39 H 0.178 0.822 40 H 0.166 0.834 41 H 0.146 0.854 42 H 0.234 0.766 43 H -0.175 1.175 44 H -0.170 1.170 45 H 0.183 0.817 46 H 0.183 0.817 47 H 0.110 0.890 48 H 0.108 0.892 49 H 0.108 0.892 50 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 0.385 -1.308 1.202 1.817 hybrid contribution 0.508 -0.193 -1.780 1.861 sum 0.893 -1.501 -0.578 1.840 Atomic orbital electron populations 1.21826 0.92231 1.03315 1.03762 1.23106 0.95702 0.79694 1.02781 1.86506 1.24147 1.32889 1.83604 1.23573 0.80877 0.92323 0.72318 1.90693 1.60481 1.43024 1.45033 1.21234 0.96531 0.90407 1.02410 0.86297 1.21558 1.03298 0.93726 0.96268 1.22557 0.92062 0.99370 1.06451 1.20378 0.93951 0.78933 0.94364 1.93007 1.87678 1.38691 1.97401 1.31893 1.15462 1.16040 1.19479 1.05815 0.75591 0.74991 0.75028 1.93693 1.80295 1.34135 1.82437 1.93683 1.28402 1.84598 1.83875 1.85761 1.31601 1.77023 1.67121 1.17329 0.78511 0.96679 0.98513 1.20468 0.95679 0.95725 0.96999 1.25248 0.97059 0.96465 1.01450 1.86696 1.38117 1.37405 1.68944 0.95112 0.81573 0.85272 0.78848 1.21002 0.89512 0.99167 0.98885 1.21077 0.89201 0.99517 0.98727 1.98453 1.14990 1.90765 1.94966 1.16822 0.84653 0.94339 0.91849 1.91640 1.58602 1.83348 1.75090 1.21303 0.90606 1.03534 1.03724 1.22081 1.02625 0.95702 0.96310 1.21542 0.91824 0.96237 1.04973 0.89974 0.91235 0.91339 0.91064 0.91025 0.88145 0.90629 0.89483 0.87562 0.82206 0.83358 0.85357 0.76599 1.17480 1.16952 0.81705 0.81739 0.88974 0.89153 0.89230 0.90256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.15 0.38 0.65 16 2 C 0.06 0.00 6.19 37.15 0.23 0.23 16 3 O -0.35 -0.41 10.12 -39.26 -0.40 -0.81 16 4 C 0.47 0.60 7.26 36.01 0.26 0.86 16 5 O -0.50 -1.94 15.73 -18.76 -0.30 -2.24 16 6 C -0.09 0.13 2.63 -91.77 -0.24 -0.11 16 7 H 0.12 -0.40 8.14 -51.93 -0.42 -0.83 16 8 C -0.11 0.11 4.59 -26.73 -0.12 -0.01 16 9 C -0.17 0.13 4.63 -26.73 -0.12 0.01 16 10 C 0.14 -0.10 1.11 -90.63 -0.10 -0.21 16 11 F -0.19 -0.30 16.15 2.25 0.04 -0.26 16 12 C -0.70 0.99 4.17 37.15 0.15 1.15 16 13 S 2.59 4.86 4.24 -107.50 -0.46 4.40 16 14 O -0.91 -3.10 13.13 -70.58 -0.93 -4.03 16 15 O -0.91 -3.82 15.32 -67.04 -1.03 -4.85 16 16 O -0.66 -0.78 9.36 -51.80 -0.48 -1.26 16 17 C 0.13 0.04 4.64 -39.23 -0.18 -0.14 16 18 C -0.09 0.02 4.93 -104.47 -0.52 -0.49 16 19 C -0.09 0.01 2.39 36.00 0.09 0.10 16 20 O -0.50 -1.00 10.03 -58.25 -0.58 -1.58 16 21 Si 0.69 -1.40 30.28 -169.99 -5.15 -6.55 16 22 C -0.07 0.10 8.43 -39.58 -0.33 -0.23 16 23 C -0.06 0.04 6.33 -39.42 -0.25 -0.21 16 24 Cl -0.02 0.01 28.61 -51.86 -1.48 -1.48 16 25 C 0.14 -0.08 7.27 -39.41 -0.29 -0.36 16 26 F -0.11 -0.02 16.83 2.25 0.04 0.02 16 27 C -0.17 0.22 8.50 -39.37 -0.33 -0.12 16 28 C -0.13 0.33 5.19 -26.71 -0.14 0.19 16 29 C -0.11 0.22 4.22 -26.70 -0.11 0.11 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.07 0.00 8.13 -51.93 -0.42 -0.43 16 34 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 35 H 0.10 -0.14 8.11 -51.93 -0.42 -0.56 16 36 H 0.08 -0.06 5.96 -51.93 -0.31 -0.37 16 37 H 0.09 0.04 5.67 -51.93 -0.29 -0.25 16 38 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.16 -0.54 4.82 -51.92 -0.25 -0.79 16 40 H 0.15 -0.53 5.62 -51.92 -0.29 -0.82 16 41 H 0.13 -0.08 7.79 -51.93 -0.40 -0.48 16 42 H 0.38 -0.19 8.66 45.56 0.39 0.21 16 43 H -0.25 0.30 6.66 56.52 0.38 0.67 16 44 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 45 H 0.17 -0.55 4.87 -52.49 -0.26 -0.80 16 46 H 0.17 -0.68 6.54 -52.49 -0.34 -1.03 16 47 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 48 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 49 H 0.09 -0.17 8.10 -51.93 -0.42 -0.59 16 50 H 0.08 -0.16 6.28 -51.93 -0.33 -0.49 16 LS Contribution 422.01 15.07 6.36 6.36 Total: 0.00 -9.67 422.01 -11.95 -21.61 By element: Atomic # 1 Polarization: -4.78 SS G_CDS: -5.95 Total: -10.73 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: -1.63 Total: 1.40 kcal Atomic # 8 Polarization: -11.06 SS G_CDS: -3.72 Total: -14.78 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.07 Total: -0.24 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.15 Total: -6.55 kcal Atomic # 16 Polarization: 4.86 SS G_CDS: -0.46 Total: 4.40 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -1.48 Total: -1.48 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -9.67 -11.95 -21.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10548610_16464696.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -256.444 kcal (2) G-P(sol) polarization free energy of solvation -9.668 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -266.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.945 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.613 kcal (6) G-S(sol) free energy of system = (1) + (5) -278.057 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds