Wall clock time and date at job start Mon Mar 8 2021 08:19:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45198 * 109.47099 * 2 1 4 4 C 1.34229 * 116.99977 * 180.02562 * 3 2 1 5 5 O 1.20833 * 120.00028 * 359.97438 * 4 3 2 6 6 C 1.50700 * 120.00168 * 180.02562 * 4 3 2 7 7 H 1.09002 * 109.46974 * 299.99919 * 6 4 3 8 8 C 1.53005 * 109.47278 * 59.99896 * 6 4 3 9 9 C 1.53000 * 109.47158 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.46919 * 299.99800 * 9 8 6 11 11 F 1.39907 * 109.46626 * 180.02562 * 10 9 8 12 12 C 1.52993 * 109.47137 * 299.99779 * 10 9 8 13 13 S 1.81400 * 109.47544 * 305.00471 * 12 10 9 14 14 O 1.42098 * 110.53959 * 297.39305 * 13 12 10 15 15 O 1.42092 * 110.54211 * 74.14622 * 13 12 10 16 16 O 1.52207 * 104.44895 * 185.77437 * 13 12 10 17 17 C 1.35915 * 113.99919 * 76.77635 * 16 13 12 18 18 C 1.38709 * 120.03126 * 97.09102 * 17 16 13 19 19 C 1.50698 * 119.99956 * 359.97438 * 18 17 16 20 20 O 1.42900 * 109.46921 * 283.90311 * 19 18 17 21 21 Si 1.86298 * 109.47308 * 163.90110 * 19 18 17 22 22 C 1.38192 * 120.00304 * 179.71943 * 18 17 16 23 23 C 1.38293 * 120.06631 * 0.54602 * 22 18 17 24 24 Cl 1.73600 * 119.96757 * 179.70074 * 23 22 18 25 25 C 1.38611 * 120.06060 * 359.73051 * 23 22 18 26 26 F 1.35100 * 119.99907 * 179.97438 * 25 23 22 27 27 C 1.38325 * 119.99926 * 359.97438 * 25 23 22 28 28 C 1.52998 * 109.47450 * 60.00345 * 10 9 8 29 29 C 1.52999 * 109.47327 * 179.97438 * 6 4 3 30 30 H 1.08997 * 109.47624 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47033 * 300.00110 * 1 2 3 32 32 H 1.08998 * 109.47593 * 59.99698 * 1 2 3 33 33 H 1.09000 * 109.47033 * 239.99889 * 2 1 3 34 34 H 1.08998 * 109.47593 * 120.00302 * 2 1 3 35 35 H 1.09006 * 109.46578 * 300.00372 * 8 6 4 36 36 H 1.08994 * 109.47005 * 59.99813 * 8 6 4 37 37 H 1.09000 * 109.46580 * 179.97438 * 9 8 6 38 38 H 1.09002 * 109.47138 * 59.99996 * 9 8 6 39 39 H 1.09000 * 109.46925 * 65.00763 * 12 10 9 40 40 H 1.09007 * 109.47366 * 184.99797 * 12 10 9 41 41 H 1.09004 * 109.47173 * 43.90090 * 19 18 17 42 42 H 0.96701 * 113.99689 * 299.99945 * 20 19 18 43 43 H 1.48498 * 109.99721 * 58.68004 * 21 19 18 44 44 H 1.48500 * 109.99836 * 179.97438 * 21 19 18 45 45 H 1.07999 * 119.96925 * 180.25984 * 22 18 17 46 46 H 1.07993 * 120.03908 * 180.02562 * 27 25 23 47 47 H 1.09002 * 109.47071 * 59.99519 * 28 10 9 48 48 H 1.08998 * 109.47533 * 179.97438 * 28 10 9 49 49 H 1.08995 * 109.47216 * 59.99510 * 29 6 4 50 50 H 1.09002 * 109.47143 * 299.99957 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.5843 3.4700 -0.8895 8 6 3.4498 3.6837 1.2499 9 6 4.0341 5.0977 1.2501 10 6 5.5620 5.0181 1.2491 11 9 6.0963 6.3111 1.2499 12 6 6.0346 4.2708 2.4977 13 16 5.3530 5.0714 3.9759 14 8 5.8338 6.4039 4.0878 15 8 3.9689 4.7785 4.1082 16 8 6.0048 4.3383 5.1396 17 6 7.2943 4.7015 5.3692 18 6 7.5871 5.6430 6.3448 19 6 6.4752 6.2642 7.1503 20 8 5.7968 7.2378 6.3542 21 14 7.1882 7.0860 8.6626 22 6 8.8988 6.0076 6.5817 23 6 9.9198 5.4430 5.8392 24 17 11.5660 5.9087 6.1336 25 6 9.6298 4.5061 4.8597 26 9 10.6281 3.9557 4.1347 27 6 8.3182 4.1347 4.6245 28 6 6.0330 4.2719 -0.0008 29 6 5.4486 2.8573 -0.0001 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5139 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 1.8933 -0.5139 -0.8900 34 1 1.8934 -0.5139 0.8899 35 1 2.3612 3.7407 1.2504 36 1 3.7861 3.1510 2.1394 37 1 3.6982 5.6294 2.1404 38 1 3.6974 5.6301 0.3606 39 1 5.6920 3.2370 2.4538 40 1 7.1235 4.2910 2.5429 41 1 5.7712 5.4899 7.4554 42 1 6.3635 7.9586 6.0468 43 1 8.1733 8.1220 8.2608 44 1 6.1017 7.7029 9.4652 45 1 9.1265 6.7377 7.3443 46 1 8.0916 3.4045 3.8618 47 1 5.6963 4.8043 -0.8903 48 1 7.1215 4.2155 -0.0017 49 1 5.7845 2.3255 -0.8903 50 1 5.7846 2.3248 0.8896 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_10548610_16464696.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:19:15 Heat of formation + Delta-G solvation = -274.813064 kcal Electronic energy + Delta-G solvation = -44523.209610 eV Core-core repulsion = 38500.940657 eV Total energy + Delta-G solvation = -6022.268952 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 455.084 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -50.35546 -49.06144 -42.73040 -41.89047 -39.80776 -39.64651 -38.49767 -38.12252 -37.71277 -37.55168 -37.28477 -33.67612 -32.98983 -32.48961 -32.14773 -31.73357 -29.35178 -27.09093 -25.56718 -25.24711 -24.23662 -23.65950 -23.53912 -22.27314 -21.86611 -20.63454 -19.83787 -19.36366 -19.26844 -18.81337 -18.60103 -18.18129 -17.93388 -17.82194 -17.68932 -17.37541 -17.14833 -16.87617 -16.80783 -16.29934 -16.23337 -16.03549 -15.71235 -15.47393 -15.41274 -15.27534 -15.09354 -14.95014 -14.51121 -14.43875 -14.21521 -14.13601 -14.03284 -13.86656 -13.73679 -13.68604 -13.57337 -13.39981 -13.31887 -13.22439 -13.13701 -12.93235 -12.84197 -12.75178 -12.71535 -12.55794 -12.51138 -12.34289 -12.15809 -11.96883 -11.88546 -11.65685 -11.54489 -11.43984 -11.21084 -10.75263 -10.55352 -10.07552 -4.98441 -1.45510 -0.61615 -0.57250 0.58437 0.74222 1.04533 1.12667 1.51567 1.58477 1.65962 1.92114 2.23865 2.54217 2.65344 2.74778 2.97070 3.01692 3.05565 3.15040 3.22157 3.32118 3.38222 3.42535 3.60637 3.66612 3.76839 3.87966 3.89797 3.96245 3.97347 4.02320 4.10718 4.16000 4.18007 4.22497 4.25598 4.30191 4.34703 4.41671 4.45691 4.59750 4.63143 4.72112 4.78961 4.82701 4.87328 4.88099 4.96237 5.04778 5.06482 5.11862 5.18622 5.42011 6.46636 6.61258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.465 3.535 5 O -0.534 6.534 6 C -0.082 4.082 7 H 0.142 0.858 8 C -0.111 4.111 9 C -0.172 4.172 10 C 0.136 3.864 11 F -0.202 7.202 12 C -0.694 4.694 13 S 2.587 3.413 14 O -0.931 6.931 15 O -0.943 6.943 16 O -0.661 6.661 17 C 0.112 3.888 18 C -0.090 4.090 19 C -0.116 4.116 20 O -0.528 6.528 21 Si 0.781 3.219 22 C -0.061 4.061 23 C -0.058 4.058 24 Cl -0.023 7.023 25 C 0.138 3.862 26 F -0.112 7.112 27 C -0.164 4.164 28 C -0.122 4.122 29 C -0.108 4.108 30 H 0.095 0.905 31 H 0.067 0.933 32 H 0.069 0.931 33 H 0.070 0.930 34 H 0.067 0.933 35 H 0.100 0.900 36 H 0.069 0.931 37 H 0.069 0.931 38 H 0.124 0.876 39 H 0.180 0.820 40 H 0.173 0.827 41 H 0.125 0.875 42 H 0.391 0.609 43 H -0.254 1.254 44 H -0.292 1.292 45 H 0.183 0.817 46 H 0.192 0.808 47 H 0.105 0.895 48 H 0.102 0.898 49 H 0.092 0.908 50 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.009 -2.026 -0.762 2.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.309 3.691 5 O -0.424 6.424 6 C -0.100 4.100 7 H 0.160 0.840 8 C -0.149 4.149 9 C -0.209 4.209 10 C 0.117 3.883 11 F -0.182 7.182 12 C -0.821 4.821 13 S 2.684 3.316 14 O -0.929 6.929 15 O -0.941 6.941 16 O -0.619 6.619 17 C 0.069 3.931 18 C -0.094 4.094 19 C -0.222 4.222 20 O -0.337 6.337 21 Si 0.682 3.318 22 C -0.080 4.080 23 C -0.087 4.087 24 Cl 0.006 6.994 25 C 0.118 3.882 26 F -0.091 7.091 27 C -0.185 4.185 28 C -0.160 4.160 29 C -0.145 4.145 30 H 0.114 0.886 31 H 0.086 0.914 32 H 0.088 0.912 33 H 0.089 0.911 34 H 0.086 0.914 35 H 0.119 0.881 36 H 0.087 0.913 37 H 0.088 0.912 38 H 0.143 0.857 39 H 0.198 0.802 40 H 0.191 0.809 41 H 0.143 0.857 42 H 0.242 0.758 43 H -0.179 1.179 44 H -0.220 1.220 45 H 0.200 0.800 46 H 0.209 0.791 47 H 0.124 0.876 48 H 0.121 0.879 49 H 0.111 0.889 50 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 1.473 -1.658 0.303 2.238 hybrid contribution 0.124 -0.116 -1.506 1.516 sum 1.597 -1.774 -1.204 2.673 Atomic orbital electron populations 1.21831 0.90886 1.04241 1.03724 1.23255 0.96829 0.79328 1.02575 1.86519 1.24309 1.33495 1.83377 1.24131 0.80645 0.93058 0.71233 1.90675 1.60987 1.44185 1.46554 1.21325 0.96934 0.88776 1.03011 0.84017 1.21544 1.03387 0.93611 0.96314 1.22614 0.92328 0.99442 1.06547 1.20601 0.93886 0.78496 0.95337 1.92981 1.87845 1.39864 1.97505 1.31816 1.16849 1.16559 1.16888 1.05757 0.75128 0.74892 0.75865 1.93657 1.80354 1.35719 1.83207 1.93637 1.30677 1.85023 1.84802 1.85736 1.32212 1.76724 1.67232 1.17615 0.78411 0.97603 0.99432 1.20530 0.96011 0.95740 0.97070 1.25656 0.97390 0.96652 1.02552 1.86666 1.39246 1.38074 1.69705 0.94157 0.79116 0.83169 0.75407 1.21111 0.88736 0.99114 0.98998 1.21176 0.89195 0.99542 0.98799 1.98454 1.15176 1.90782 1.94972 1.16896 0.84794 0.94549 0.92004 1.91632 1.58769 1.83448 1.75211 1.21511 0.89837 1.03389 1.03729 1.22083 1.03344 0.94987 0.95612 1.21560 0.91228 0.96581 1.05147 0.88591 0.91411 0.91168 0.91138 0.91415 0.88146 0.91278 0.91237 0.85725 0.80202 0.80937 0.85687 0.75844 1.17899 1.21963 0.79995 0.79092 0.87612 0.87907 0.88938 0.90316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.52 10.29 71.98 0.74 1.26 16 2 C 0.05 0.03 6.19 71.98 0.45 0.47 16 3 O -0.36 -0.95 10.12 -51.41 -0.52 -1.47 16 4 C 0.47 1.20 7.26 71.24 0.52 1.71 16 5 O -0.53 -4.26 15.73 21.94 0.35 -3.91 16 6 C -0.08 0.31 2.63 -11.54 -0.03 0.28 16 7 H 0.14 -1.20 8.14 -2.39 -0.02 -1.22 16 8 C -0.11 0.22 4.59 30.60 0.14 0.37 16 9 C -0.17 0.27 4.63 30.59 0.14 0.41 16 10 C 0.14 -0.30 1.11 -10.80 -0.01 -0.31 16 11 F -0.20 -0.58 16.15 44.97 0.73 0.15 16 12 C -0.69 2.32 4.17 71.98 0.30 2.62 16 13 S 2.59 12.61 4.24 -56.49 -0.24 12.37 16 14 O -0.93 -7.77 13.13 -115.18 -1.51 -9.28 16 15 O -0.94 -9.92 15.32 -118.57 -1.82 -11.74 16 16 O -0.66 -2.22 9.36 -61.68 -0.58 -2.80 16 17 C 0.11 0.10 4.64 22.50 0.10 0.20 16 18 C -0.09 0.01 4.93 -19.76 -0.10 -0.09 16 19 C -0.12 -0.10 2.39 71.24 0.17 0.07 16 20 O -0.53 -3.03 10.03 -126.97 -1.27 -4.31 16 21 Si 0.78 -2.96 30.28 68.60 2.08 -0.88 16 22 C -0.06 0.20 8.43 22.27 0.19 0.39 16 23 C -0.06 0.11 6.33 22.37 0.14 0.25 16 24 Cl -0.02 0.03 28.61 -2.72 -0.08 -0.05 16 25 C 0.14 -0.24 7.27 22.38 0.16 -0.08 16 26 F -0.11 0.06 16.83 44.97 0.76 0.82 16 27 C -0.16 0.53 8.50 22.41 0.19 0.72 16 28 C -0.12 0.84 5.19 30.61 0.16 1.00 16 29 C -0.11 0.59 4.22 30.61 0.13 0.72 16 30 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 31 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 32 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 33 H 0.07 0.03 8.13 -2.39 -0.02 0.01 16 34 H 0.07 0.07 8.13 -2.39 -0.02 0.05 16 35 H 0.10 -0.22 8.11 -2.38 -0.02 -0.24 16 36 H 0.07 -0.06 5.96 -2.39 -0.01 -0.07 16 37 H 0.07 0.17 5.67 -2.39 -0.01 0.16 16 38 H 0.12 -0.73 8.14 -2.39 -0.02 -0.75 16 39 H 0.18 -1.35 4.82 -2.39 -0.01 -1.36 16 40 H 0.17 -1.49 5.62 -2.39 -0.01 -1.50 16 41 H 0.13 0.08 7.79 -2.38 -0.02 0.07 16 42 H 0.39 0.29 8.66 -74.06 -0.64 -0.36 16 43 H -0.25 0.83 6.66 99.48 0.66 1.49 16 44 H -0.29 -1.16 7.11 99.48 0.71 -0.45 16 45 H 0.18 -1.36 4.87 -2.91 -0.01 -1.38 16 46 H 0.19 -1.89 6.54 -2.91 -0.02 -1.90 16 47 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 48 H 0.10 -0.91 8.14 -2.39 -0.02 -0.93 16 49 H 0.09 -0.50 8.10 -2.39 -0.02 -0.52 16 50 H 0.08 -0.42 6.28 -2.39 -0.01 -0.43 16 Total: 0.00 -24.23 422.01 1.67 -22.56 By element: Atomic # 1 Polarization: -11.84 SS G_CDS: 0.39 Total: -11.45 kcal Atomic # 6 Polarization: 6.61 SS G_CDS: 3.39 Total: 10.00 kcal Atomic # 8 Polarization: -28.15 SS G_CDS: -5.36 Total: -33.51 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 1.48 Total: 0.97 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: 2.08 Total: -0.88 kcal Atomic # 16 Polarization: 12.61 SS G_CDS: -0.24 Total: 12.37 kcal Atomic # 17 Polarization: 0.03 SS G_CDS: -0.08 Total: -0.05 kcal Total: -24.23 1.67 -22.56 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10548610_16464696.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -252.257 kcal (2) G-P(sol) polarization free energy of solvation -24.229 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -276.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.673 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.556 kcal (6) G-S(sol) free energy of system = (1) + (5) -274.813 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds