Wall clock time and date at job start Mon Mar 8 2021 08:19:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45197 * 109.46849 * 2 1 4 4 C 1.34227 * 117.00106 * 180.02562 * 3 2 1 5 5 O 1.20824 * 120.00207 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00113 * 180.02562 * 4 3 2 7 7 H 1.09000 * 109.47741 * 59.99425 * 6 4 3 8 8 C 1.53001 * 109.47449 * 179.97438 * 6 4 3 9 9 C 1.53000 * 109.47629 * 179.97438 * 8 6 4 10 10 C 1.52998 * 109.47146 * 300.00290 * 9 8 6 11 11 F 1.39903 * 109.47066 * 300.00035 * 10 9 8 12 12 C 1.52997 * 109.47389 * 179.97438 * 10 9 8 13 13 S 1.81397 * 109.47484 * 184.99865 * 12 10 9 14 14 O 1.42093 * 110.54435 * 68.37248 * 13 12 10 15 15 O 1.42103 * 110.54023 * 291.62714 * 13 12 10 16 16 O 1.52193 * 104.45261 * 180.02562 * 13 12 10 17 17 C 1.35922 * 114.00501 * 74.99416 * 16 13 12 18 18 C 1.38715 * 120.02645 * 90.00087 * 17 16 13 19 19 C 1.50704 * 119.99598 * 359.75212 * 18 17 16 20 20 O 1.42896 * 109.47122 * 75.00183 * 19 18 17 21 21 Si 1.86297 * 109.46822 * 194.99952 * 19 18 17 22 22 C 1.38185 * 120.00141 * 179.72964 * 18 17 16 23 23 C 1.38293 * 120.07018 * 359.97438 * 22 18 17 24 24 Cl 1.73597 * 119.96707 * 180.02562 * 23 22 18 25 25 C 1.38611 * 120.06026 * 359.97438 * 23 22 18 26 26 F 1.35096 * 120.00222 * 180.02562 * 25 23 22 27 27 C 1.38329 * 119.99288 * 0.03822 * 25 23 22 28 28 C 1.52999 * 109.47559 * 59.99636 * 10 9 8 29 29 C 1.53006 * 109.46946 * 299.99652 * 6 4 3 30 30 H 1.09008 * 109.47037 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.47151 * 299.99621 * 1 2 3 32 32 H 1.08993 * 109.47330 * 60.00139 * 1 2 3 33 33 H 1.08994 * 109.47170 * 240.00023 * 2 1 3 34 34 H 1.09001 * 109.47058 * 119.99684 * 2 1 3 35 35 H 1.09008 * 109.46956 * 59.99492 * 8 6 4 36 36 H 1.08999 * 109.47096 * 300.00375 * 8 6 4 37 37 H 1.08996 * 109.47354 * 179.97438 * 9 8 6 38 38 H 1.09002 * 109.46684 * 60.00021 * 9 8 6 39 39 H 1.09005 * 109.47030 * 64.99975 * 12 10 9 40 40 H 1.09000 * 109.47022 * 305.00269 * 12 10 9 41 41 H 1.09004 * 109.47155 * 314.99598 * 19 18 17 42 42 H 0.96709 * 113.99757 * 299.99129 * 20 19 18 43 43 H 1.48508 * 110.00113 * 298.68005 * 21 19 18 44 44 H 1.48504 * 110.00293 * 59.99823 * 21 19 18 45 45 H 1.08000 * 119.96213 * 179.97438 * 22 18 17 46 46 H 1.07999 * 120.02742 * 179.97438 * 27 25 23 47 47 H 1.09002 * 109.47045 * 59.99794 * 28 10 9 48 48 H 1.08996 * 109.47615 * 180.02562 * 28 10 9 49 49 H 1.08994 * 109.46998 * 300.00088 * 29 6 4 50 50 H 1.08998 * 109.46761 * 60.00138 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0005 6 6 3.9205 2.9375 0.0000 7 1 3.5850 3.4692 0.8904 8 6 5.4485 2.8576 -0.0001 9 6 6.0332 4.2714 -0.0002 10 6 5.5615 5.0183 -1.2494 11 9 5.9926 4.3353 -2.3917 12 6 6.1457 6.4324 -1.2492 13 16 5.4702 7.3660 -2.6501 14 8 4.0848 7.6180 -2.4598 15 8 5.9579 6.8442 -3.8786 16 8 6.1202 8.7378 -2.5411 17 6 7.4232 8.7645 -2.9272 18 6 7.7501 9.0279 -4.2493 19 6 6.6602 9.2790 -5.2593 20 8 6.1227 10.5886 -5.0644 21 14 7.3646 9.1465 -6.9789 22 6 9.0751 9.0605 -4.6401 23 6 10.0765 8.8312 -3.7143 24 17 11.7402 8.8734 -4.2080 25 6 9.7529 8.5688 -2.3922 26 9 10.7321 8.3455 -1.4887 27 6 8.4274 8.5354 -1.9983 28 6 4.0336 5.0984 -1.2493 29 6 3.4484 3.6851 -1.2487 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8899 33 1 1.8933 -0.5138 -0.8899 34 1 1.8933 -0.5138 0.8900 35 1 5.7844 2.3257 -0.8904 36 1 5.7845 2.3250 0.8896 37 1 7.1217 4.2144 0.0002 38 1 5.6973 4.8035 0.8898 39 1 7.2307 6.3772 -1.3387 40 1 5.8830 6.9339 -0.3178 41 1 5.8698 8.5392 -5.1325 42 1 5.7378 10.7295 -4.1884 43 1 8.4215 10.1711 -7.1752 44 1 7.9269 7.7891 -7.1943 45 1 9.3290 9.2652 -5.6697 46 1 8.1746 8.3306 -0.9684 47 1 3.6977 5.6305 -0.3593 48 1 3.6975 5.6301 -2.1394 49 1 3.7840 3.1535 -2.1390 50 1 2.3599 3.7421 -1.2481 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_10548610_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:19:19 Heat of formation + Delta-G solvation = -282.292589 kcal Electronic energy + Delta-G solvation = -43607.797848 eV Core-core repulsion = 37585.204559 eV Total energy + Delta-G solvation = -6022.593289 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 455.084 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -50.43692 -49.11049 -42.89533 -41.80086 -39.87338 -39.15183 -38.63227 -38.17918 -37.71454 -37.66936 -37.41574 -34.31124 -33.10488 -32.62824 -32.11857 -31.84053 -29.15468 -27.21924 -25.59231 -25.02233 -24.21961 -23.74171 -23.55529 -22.23428 -21.85124 -20.88636 -20.09044 -19.54911 -19.33519 -18.82137 -18.71275 -18.13080 -17.96153 -17.85623 -17.72968 -17.45982 -17.20911 -17.15590 -16.77463 -16.42947 -16.25754 -16.11254 -15.78964 -15.60728 -15.29997 -15.04939 -14.91804 -14.81527 -14.58538 -14.50768 -14.25424 -14.21475 -14.03136 -13.96047 -13.80057 -13.73141 -13.58904 -13.55361 -13.39076 -13.26389 -13.21400 -13.18134 -12.93360 -12.78788 -12.63589 -12.52906 -12.48729 -12.28077 -12.21467 -12.01768 -11.77294 -11.67238 -11.57616 -11.38258 -11.30048 -11.16382 -10.67833 -10.19756 -4.95689 -1.56490 -0.74658 -0.69074 0.43077 0.58941 1.05270 1.17258 1.48699 1.58679 1.61606 1.73347 2.11959 2.41465 2.50235 2.73278 2.86891 3.01108 3.03424 3.09826 3.27897 3.31284 3.43984 3.50790 3.61313 3.66045 3.76360 3.80779 3.94388 3.96900 3.99567 4.00795 4.02069 4.10531 4.12564 4.17148 4.24346 4.27385 4.28368 4.29577 4.49208 4.50849 4.59323 4.76518 4.78919 4.86324 4.87836 4.91919 4.93375 4.98341 5.07118 5.11934 5.22576 5.41608 6.37202 6.61800 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.463 3.537 5 O -0.540 6.540 6 C -0.078 4.078 7 H 0.149 0.851 8 C -0.111 4.111 9 C -0.123 4.123 10 C 0.125 3.875 11 F -0.211 7.211 12 C -0.671 4.671 13 S 2.575 3.425 14 O -0.931 6.931 15 O -0.961 6.961 16 O -0.652 6.652 17 C 0.100 3.900 18 C -0.091 4.091 19 C -0.118 4.118 20 O -0.533 6.533 21 Si 0.799 3.201 22 C -0.078 4.078 23 C -0.059 4.059 24 Cl -0.025 7.025 25 C 0.134 3.866 26 F -0.108 7.108 27 C -0.136 4.136 28 C -0.177 4.177 29 C -0.110 4.110 30 H 0.095 0.905 31 H 0.071 0.929 32 H 0.068 0.932 33 H 0.064 0.936 34 H 0.069 0.931 35 H 0.056 0.944 36 H 0.087 0.913 37 H 0.099 0.901 38 H 0.129 0.871 39 H 0.172 0.828 40 H 0.211 0.789 41 H 0.089 0.911 42 H 0.377 0.623 43 H -0.256 1.256 44 H -0.257 1.257 45 H 0.160 0.840 46 H 0.212 0.788 47 H 0.137 0.863 48 H 0.077 0.923 49 H 0.059 0.941 50 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.168 1.793 5.180 5.895 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.308 3.692 5 O -0.430 6.430 6 C -0.096 4.096 7 H 0.166 0.834 8 C -0.149 4.149 9 C -0.161 4.161 10 C 0.106 3.894 11 F -0.191 7.191 12 C -0.800 4.800 13 S 2.674 3.326 14 O -0.929 6.929 15 O -0.959 6.959 16 O -0.610 6.610 17 C 0.058 3.942 18 C -0.095 4.095 19 C -0.225 4.225 20 O -0.340 6.340 21 Si 0.697 3.303 22 C -0.096 4.096 23 C -0.087 4.087 24 Cl 0.004 6.996 25 C 0.113 3.887 26 F -0.086 7.086 27 C -0.157 4.157 28 C -0.215 4.215 29 C -0.148 4.148 30 H 0.113 0.887 31 H 0.090 0.910 32 H 0.087 0.913 33 H 0.082 0.918 34 H 0.087 0.913 35 H 0.075 0.925 36 H 0.105 0.895 37 H 0.118 0.882 38 H 0.147 0.853 39 H 0.190 0.810 40 H 0.228 0.772 41 H 0.107 0.893 42 H 0.226 0.774 43 H -0.182 1.182 44 H -0.182 1.182 45 H 0.177 0.823 46 H 0.229 0.771 47 H 0.156 0.844 48 H 0.096 0.904 49 H 0.078 0.922 50 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -1.405 1.743 3.550 4.197 hybrid contribution 0.705 -0.965 1.915 2.258 sum -0.700 0.778 5.465 5.565 Atomic orbital electron populations 1.21824 0.90604 1.04252 1.03822 1.23244 0.96978 0.79410 1.02370 1.86510 1.24192 1.33382 1.83437 1.24269 0.80609 0.93277 0.71065 1.90676 1.61158 1.44491 1.46690 1.21297 0.96481 0.88568 1.03270 0.83385 1.21471 0.91797 0.97643 1.03939 1.22170 1.03154 0.94522 0.96278 1.20816 0.95023 0.88053 0.85540 1.92953 1.91335 1.81697 1.53153 1.31509 1.16008 1.08613 1.23831 1.06041 0.75275 0.73806 0.77439 1.93673 1.29805 1.82261 1.87184 1.93662 1.80713 1.79147 1.42373 1.85731 1.30332 1.58302 1.86627 1.17525 0.78672 1.05756 0.92231 1.20650 0.95907 0.98539 0.94365 1.25870 0.96998 0.88589 1.11013 1.86744 1.79083 1.28855 1.39271 0.91863 0.81382 0.78805 0.78295 1.20857 0.89938 0.98350 1.00477 1.21239 0.88660 1.05306 0.93519 1.98450 1.13430 1.96448 1.91228 1.16885 0.85638 1.01140 0.84988 1.91644 1.60217 1.91495 1.65275 1.21549 0.88815 1.02205 1.03096 1.22808 0.92000 0.99235 1.07412 1.21458 1.02922 0.94190 0.96222 0.88655 0.90995 0.91311 0.91790 0.91281 0.92540 0.89464 0.88246 0.85281 0.81036 0.77157 0.89346 0.77374 1.18190 1.18169 0.82253 0.77135 0.84444 0.90410 0.92188 0.88086 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.54 10.29 71.98 0.74 1.28 16 2 C 0.05 0.06 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.06 10.12 -51.39 -0.52 -1.58 16 4 C 0.46 1.85 7.25 71.23 0.52 2.36 16 5 O -0.54 -5.86 15.73 21.97 0.35 -5.51 16 6 C -0.08 0.26 2.63 -11.54 -0.03 0.23 16 7 H 0.15 -1.48 8.14 -2.39 -0.02 -1.50 16 8 C -0.11 0.34 4.37 30.59 0.13 0.47 16 9 C -0.12 1.11 5.00 30.59 0.15 1.27 16 10 C 0.13 -0.61 0.89 -10.80 -0.01 -0.62 16 11 F -0.21 -0.68 15.33 44.97 0.69 0.01 16 12 C -0.67 6.47 4.79 71.98 0.34 6.81 16 13 S 2.58 -0.63 4.17 -56.49 -0.24 -0.87 16 14 O -0.93 -3.82 15.64 -118.57 -1.85 -5.68 16 15 O -0.96 -5.85 13.92 -118.57 -1.65 -7.50 16 16 O -0.65 1.34 9.03 -61.76 -0.56 0.79 16 17 C 0.10 -0.09 4.73 22.49 0.11 0.02 16 18 C -0.09 -0.27 4.69 -19.76 -0.09 -0.36 16 19 C -0.12 -0.44 2.19 71.24 0.16 -0.29 16 20 O -0.53 -1.67 12.65 -148.98 -1.89 -3.55 16 21 Si 0.80 1.05 30.40 68.60 2.09 3.13 16 22 C -0.08 -0.19 8.44 22.27 0.19 -0.01 16 23 C -0.06 -0.08 6.33 22.37 0.14 0.06 16 24 Cl -0.02 -0.05 28.61 -2.72 -0.08 -0.13 16 25 C 0.13 -0.22 7.27 22.38 0.16 -0.06 16 26 F -0.11 0.12 16.83 44.97 0.76 0.88 16 27 C -0.14 0.77 8.45 22.40 0.19 0.96 16 28 C -0.18 0.81 4.31 30.58 0.13 0.94 16 29 C -0.11 0.28 5.01 30.58 0.15 0.44 16 30 H 0.09 -0.60 8.14 -2.38 -0.02 -0.62 16 31 H 0.07 -0.30 8.14 -2.39 -0.02 -0.31 16 32 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 33 H 0.06 0.14 8.13 -2.39 -0.02 0.12 16 34 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 35 H 0.06 0.15 7.76 -2.38 -0.02 0.13 16 36 H 0.09 -0.28 8.10 -2.39 -0.02 -0.29 16 37 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 38 H 0.13 -2.08 8.14 -2.39 -0.02 -2.10 16 39 H 0.17 -2.33 6.62 -2.39 -0.02 -2.35 16 40 H 0.21 -4.10 8.14 -2.39 -0.02 -4.12 16 41 H 0.09 0.39 5.40 -2.38 -0.01 0.38 16 42 H 0.38 -0.51 8.59 -74.05 -0.64 -1.15 16 43 H -0.26 -0.79 6.81 99.48 0.68 -0.12 16 44 H -0.26 -1.13 7.11 99.48 0.71 -0.43 16 45 H 0.16 0.24 4.93 -2.91 -0.01 0.23 16 46 H 0.21 -3.22 7.51 -2.91 -0.02 -3.24 16 47 H 0.14 -1.56 8.14 -2.39 -0.02 -1.58 16 48 H 0.08 -0.07 5.40 -2.39 -0.01 -0.08 16 49 H 0.06 0.09 7.80 -2.39 -0.02 0.07 16 50 H 0.10 -0.41 8.11 -2.39 -0.02 -0.43 16 Total: 0.00 -25.54 430.82 0.93 -24.61 By element: Atomic # 1 Polarization: -19.01 SS G_CDS: 0.40 Total: -18.61 kcal Atomic # 6 Polarization: 10.58 SS G_CDS: 3.43 Total: 14.01 kcal Atomic # 8 Polarization: -16.92 SS G_CDS: -6.12 Total: -23.04 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 1.45 Total: 0.89 kcal Atomic # 14 Polarization: 1.05 SS G_CDS: 2.09 Total: 3.13 kcal Atomic # 16 Polarization: -0.63 SS G_CDS: -0.24 Total: -0.87 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -0.08 Total: -0.13 kcal Total: -25.54 0.93 -24.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10548610_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -257.679 kcal (2) G-P(sol) polarization free energy of solvation -25.541 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -283.220 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.928 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.613 kcal (6) G-S(sol) free energy of system = (1) + (5) -282.293 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds