Wall clock time and date at job start Mon Mar 8 2021 08:22:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45202 * 109.47188 * 2 1 4 4 C 1.34225 * 117.00350 * 179.97438 * 3 2 1 5 5 O 1.20830 * 119.99826 * 0.02562 * 4 3 2 6 6 C 1.50706 * 120.00285 * 179.97438 * 4 3 2 7 7 H 1.09001 * 112.84522 * 48.80597 * 6 4 3 8 8 C 1.53783 * 113.61355 * 180.02562 * 6 4 3 9 9 C 1.53781 * 87.07933 * 140.06859 * 8 6 4 10 10 F 1.39892 * 113.61604 * 89.19889 * 9 8 6 11 11 C 1.53004 * 113.61193 * 220.01965 * 9 8 6 12 12 S 1.81396 * 109.46947 * 178.46687 * 11 9 8 13 13 O 1.42105 * 110.54146 * 68.37373 * 12 11 9 14 14 O 1.42099 * 110.54873 * 291.62428 * 12 11 9 15 15 O 1.52207 * 104.45058 * 179.97438 * 12 11 9 16 16 C 1.35920 * 113.99488 * 74.15133 * 15 12 11 17 17 C 1.38706 * 120.03321 * 262.71745 * 16 15 12 18 18 C 1.50708 * 119.99588 * 359.97438 * 17 16 15 19 19 O 1.42901 * 109.46602 * 253.58430 * 18 17 16 20 20 Si 1.86297 * 109.47067 * 133.58487 * 18 17 16 21 21 C 1.38186 * 120.00492 * 179.97438 * 17 16 15 22 22 C 1.38290 * 120.06914 * 359.97438 * 21 17 16 23 23 Cl 1.73599 * 119.97257 * 179.97438 * 22 21 17 24 24 C 1.38617 * 120.05888 * 359.97093 * 22 21 17 25 25 F 1.35098 * 119.99834 * 180.02562 * 24 22 21 26 26 C 1.38324 * 119.99654 * 359.81222 * 24 22 21 27 27 C 1.53784 * 87.17274 * 334.60865 * 9 8 6 28 28 H 1.09008 * 109.46954 * 60.00382 * 1 2 3 29 29 H 1.08998 * 109.47367 * 179.97438 * 1 2 3 30 30 H 1.08993 * 109.47163 * 300.00420 * 1 2 3 31 31 H 1.08997 * 109.47567 * 240.00207 * 2 1 3 32 32 H 1.08999 * 109.47104 * 119.99592 * 2 1 3 33 33 H 1.09004 * 113.61449 * 25.51947 * 8 6 4 34 34 H 1.08996 * 113.69128 * 254.62531 * 8 6 4 35 35 H 1.09002 * 109.47019 * 58.47106 * 11 9 8 36 36 H 1.08991 * 109.46995 * 298.46551 * 11 9 8 37 37 H 1.09004 * 109.46794 * 13.58166 * 18 17 16 38 38 H 0.96695 * 113.99996 * 66.42687 * 19 18 17 39 39 H 1.48499 * 110.00082 * 178.68049 * 20 18 17 40 40 H 1.48499 * 109.99906 * 299.99680 * 20 18 17 41 41 H 1.08002 * 119.96641 * 180.02562 * 21 17 16 42 42 H 1.08002 * 120.03647 * 180.20919 * 26 24 22 43 43 H 1.09000 * 113.61622 * 139.94206 * 27 9 8 44 44 H 1.09005 * 113.61296 * 270.84250 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.4707 3.5819 0.7553 8 6 5.4582 2.9682 0.0001 9 6 5.3564 4.1437 -0.9862 10 9 5.2850 5.3939 -0.3626 11 6 6.3987 4.0966 -2.1054 12 16 6.1491 5.5029 -3.2236 13 8 6.4713 6.7229 -2.5699 14 8 4.9334 5.3571 -3.9448 15 8 7.2338 5.3457 -4.2797 16 6 6.9961 4.3484 -5.1720 17 6 7.5806 3.1032 -4.9935 18 6 8.4803 2.8559 -3.8100 19 8 9.8391 2.7983 -4.2486 20 14 8.0183 1.2402 -3.0057 21 6 7.3380 2.0895 -5.9008 22 6 6.5123 2.3147 -6.9870 23 17 6.2098 1.0397 -8.1256 24 6 5.9258 3.5577 -7.1674 25 9 5.1189 3.7762 -8.2287 26 6 6.1633 4.5729 -6.2584 27 6 3.9855 3.5810 -1.3971 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3633 0.5139 0.8899 31 1 1.8934 -0.5138 -0.8900 32 1 1.8933 -0.5138 0.8900 33 1 5.9128 2.0756 -0.4298 34 1 5.8907 3.2419 0.9624 35 1 6.2916 3.1659 -2.6627 36 1 7.3980 4.1487 -1.6736 37 1 8.3647 3.6663 -3.0902 38 1 10.1785 3.6375 -4.5885 39 1 8.9188 0.9692 -1.8564 40 1 6.6073 1.2873 -2.5453 41 1 7.7932 1.1201 -5.7610 42 1 5.7039 5.5406 -6.3965 43 1 3.2295 4.3490 -1.5606 44 1 4.0367 2.8562 -2.2097 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10548610_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:22:30 Heat of formation + Delta-G solvation = -242.337099 kcal Electronic energy + Delta-G solvation = -39485.293618 eV Core-core repulsion = 33775.508167 eV Total energy + Delta-G solvation = -5709.785451 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.053 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -50.34793 -49.35594 -42.92318 -41.89795 -39.91656 -39.52360 -38.64166 -38.25048 -37.56828 -37.53418 -37.48906 -33.38898 -32.87826 -32.30084 -31.78293 -27.66104 -27.57250 -26.81616 -25.49136 -24.12042 -23.67085 -22.64116 -21.93060 -21.10728 -20.18765 -19.65167 -19.42756 -19.02449 -18.81083 -18.16809 -18.08590 -17.82756 -17.74575 -17.61558 -17.13402 -17.06314 -16.75731 -16.44814 -16.23527 -16.13644 -15.70995 -15.68308 -15.47987 -15.09819 -14.83332 -14.79772 -14.59812 -14.53803 -14.32022 -14.08411 -13.98699 -13.90397 -13.86021 -13.56238 -13.49683 -13.37138 -13.28517 -13.15729 -13.08105 -12.76886 -12.73365 -12.61971 -12.41946 -12.26354 -12.14350 -11.84259 -11.76235 -11.62801 -11.62104 -11.49956 -10.59106 -10.20211 -5.29184 -1.63729 -0.80120 -0.62519 0.45556 0.58237 0.84519 0.96174 1.21943 1.44112 1.54042 1.63361 2.05915 2.27452 2.39306 2.44941 2.48770 2.62139 2.79253 2.93888 2.95084 3.02437 3.09778 3.27098 3.35285 3.40914 3.55688 3.69201 3.76978 3.86799 3.90407 3.90684 3.99823 4.08178 4.13575 4.18063 4.20502 4.20806 4.31141 4.37553 4.41393 4.43857 4.62849 4.73048 4.76448 4.94788 4.94897 5.32496 6.12701 6.57468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.475 3.525 5 O -0.502 6.502 6 C -0.108 4.108 7 H 0.141 0.859 8 C -0.125 4.125 9 C 0.106 3.894 10 F -0.167 7.167 11 C -0.692 4.692 12 S 2.591 3.409 13 O -0.893 6.893 14 O -0.929 6.929 15 O -0.653 6.653 16 C 0.101 3.899 17 C -0.125 4.125 18 C -0.089 4.089 19 O -0.520 6.520 20 Si 0.728 3.272 21 C -0.049 4.049 22 C -0.056 4.056 23 Cl -0.018 7.018 24 C 0.139 3.861 25 F -0.107 7.107 26 C -0.112 4.112 27 C -0.145 4.145 28 H 0.068 0.932 29 H 0.082 0.918 30 H 0.068 0.932 31 H 0.072 0.928 32 H 0.072 0.928 33 H 0.119 0.881 34 H 0.105 0.895 35 H 0.153 0.847 36 H 0.161 0.839 37 H 0.072 0.928 38 H 0.375 0.625 39 H -0.233 1.233 40 H -0.229 1.229 41 H 0.172 0.828 42 H 0.170 0.830 43 H 0.114 0.886 44 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.318 -4.671 -0.281 4.690 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.269 6.269 4 C 0.317 3.683 5 O -0.389 6.389 6 C -0.127 4.127 7 H 0.158 0.842 8 C -0.163 4.163 9 C 0.086 3.914 10 F -0.147 7.147 11 C -0.815 4.815 12 S 2.683 3.317 13 O -0.892 6.892 14 O -0.927 6.927 15 O -0.612 6.612 16 C 0.059 3.941 17 C -0.128 4.128 18 C -0.197 4.197 19 O -0.326 6.326 20 Si 0.623 3.377 21 C -0.068 4.068 22 C -0.085 4.085 23 Cl 0.011 6.989 24 C 0.119 3.881 25 F -0.085 7.085 26 C -0.133 4.133 27 C -0.182 4.182 28 H 0.087 0.913 29 H 0.101 0.899 30 H 0.087 0.913 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.137 0.863 34 H 0.124 0.876 35 H 0.170 0.830 36 H 0.179 0.821 37 H 0.090 0.910 38 H 0.224 0.776 39 H -0.156 1.156 40 H -0.154 1.154 41 H 0.189 0.811 42 H 0.188 0.812 43 H 0.132 0.868 44 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -0.595 -5.331 0.261 5.371 hybrid contribution 0.287 1.370 0.165 1.410 sum -0.308 -3.961 0.426 3.996 Atomic orbital electron populations 1.21830 0.92139 1.03380 1.03796 1.23140 0.95779 0.79514 1.02873 1.86518 1.23879 1.33070 1.83446 1.23161 0.80977 0.91728 0.72386 1.90691 1.60556 1.42670 1.44989 1.22483 0.96903 0.92295 1.00976 0.84159 1.23630 0.94181 0.97544 1.00940 1.21131 0.95233 0.82415 0.92642 1.93027 1.96979 1.41311 1.83377 1.31778 1.10141 1.24637 1.14991 1.05832 0.74031 0.76476 0.75316 1.93722 1.82365 1.38324 1.74754 1.93697 1.45192 1.86602 1.67251 1.85814 1.68745 1.56558 1.50056 1.17502 1.00788 0.84607 0.91253 1.20534 1.00308 0.91688 1.00305 1.25911 0.84567 1.13680 0.95579 1.86779 1.22731 1.38621 1.84445 0.92780 0.80461 0.81356 0.83083 1.20746 0.95229 1.00080 0.90719 1.21207 1.01281 0.90353 0.95619 1.98459 1.94500 1.47898 1.58017 1.16974 0.92729 0.92061 0.86370 1.91646 1.69559 1.94892 1.52420 1.21322 0.98290 1.01360 0.92370 1.23832 0.95809 1.01908 0.96673 0.91254 0.89879 0.91288 0.90942 0.90942 0.86317 0.87617 0.82971 0.82094 0.91029 0.77603 1.15632 1.15359 0.81080 0.81234 0.86803 0.86632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.34 10.29 37.16 0.38 0.72 16 2 C 0.06 -0.03 6.19 37.16 0.23 0.20 16 3 O -0.35 -0.32 10.22 -39.25 -0.40 -0.72 16 4 C 0.48 0.50 7.49 36.01 0.27 0.77 16 5 O -0.50 -1.69 15.65 -18.75 -0.29 -1.99 16 6 C -0.11 0.12 4.23 -90.87 -0.38 -0.26 16 7 H 0.14 -0.39 8.14 -51.93 -0.42 -0.81 16 8 C -0.12 0.18 6.86 -25.92 -0.18 0.00 16 9 C 0.11 -0.08 1.60 -89.80 -0.14 -0.22 16 10 F -0.17 -0.21 16.35 2.25 0.04 -0.17 16 11 C -0.69 1.06 3.26 37.16 0.12 1.18 16 12 S 2.59 3.17 4.90 -107.50 -0.53 2.65 16 13 O -0.89 -4.21 17.57 -67.04 -1.18 -5.39 16 14 O -0.93 -2.02 15.83 -67.03 -1.06 -3.08 16 15 O -0.65 -0.14 9.06 -51.81 -0.47 -0.61 16 16 C 0.10 -0.05 4.90 -39.23 -0.19 -0.24 16 17 C -0.13 0.25 4.19 -104.46 -0.44 -0.18 16 18 C -0.09 0.23 2.10 36.01 0.08 0.30 16 19 O -0.52 1.19 12.63 -35.23 -0.44 0.75 16 20 Si 0.73 -2.07 28.99 -169.99 -4.93 -7.00 16 21 C -0.05 0.14 8.46 -39.58 -0.34 -0.20 16 22 C -0.06 0.07 6.33 -39.42 -0.25 -0.18 16 23 Cl -0.02 0.02 28.61 -51.86 -1.48 -1.47 16 24 C 0.14 -0.03 7.27 -39.41 -0.29 -0.32 16 25 F -0.11 -0.09 16.83 2.25 0.04 -0.06 16 26 C -0.11 0.02 8.57 -39.37 -0.34 -0.32 16 27 C -0.14 0.20 7.09 -25.83 -0.18 0.02 16 28 H 0.07 -0.14 8.14 -51.92 -0.42 -0.57 16 29 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 30 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.07 -0.05 8.13 -51.93 -0.42 -0.48 16 32 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 33 H 0.12 -0.16 7.25 -51.93 -0.38 -0.53 16 34 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 35 H 0.15 -0.48 3.77 -51.92 -0.20 -0.68 16 36 H 0.16 -0.66 6.84 -51.93 -0.36 -1.02 16 37 H 0.07 -0.25 4.02 -51.93 -0.21 -0.46 16 38 H 0.38 -1.76 9.12 45.56 0.42 -1.34 16 39 H -0.23 0.08 7.11 56.52 0.40 0.48 16 40 H -0.23 0.61 6.15 56.52 0.35 0.95 16 41 H 0.17 -0.94 6.72 -52.49 -0.35 -1.29 16 42 H 0.17 -0.16 7.92 -52.49 -0.42 -0.58 16 43 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 44 H 0.12 -0.28 7.94 -51.93 -0.41 -0.69 16 LS Contribution 397.42 15.07 5.99 5.99 Total: 0.00 -8.99 397.42 -10.91 -19.90 By element: Atomic # 1 Polarization: -5.57 SS G_CDS: -4.53 Total: -10.10 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -1.65 Total: 1.29 kcal Atomic # 8 Polarization: -7.18 SS G_CDS: -3.85 Total: -11.03 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.07 Total: -0.23 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: -4.93 Total: -7.00 kcal Atomic # 16 Polarization: 3.17 SS G_CDS: -0.53 Total: 2.65 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -1.48 Total: -1.47 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -8.99 -10.91 -19.90 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10548610_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -222.436 kcal (2) G-P(sol) polarization free energy of solvation -8.995 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -231.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.906 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.901 kcal (6) G-S(sol) free energy of system = (1) + (5) -242.337 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds