Wall clock time and date at job start Mon Mar 8 2021 10:50:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45207 * 109.47305 * 2 1 4 4 C 1.34224 * 117.00435 * 180.02562 * 3 2 1 5 5 O 1.20829 * 119.99713 * 0.02562 * 4 3 2 6 6 C 1.50697 * 120.00077 * 179.97438 * 4 3 2 7 7 H 1.08994 * 109.47148 * 299.99781 * 6 4 3 8 8 C 1.52998 * 109.47185 * 60.00309 * 6 4 3 9 9 C 1.52999 * 109.47337 * 179.97438 * 8 6 4 10 10 C 1.52999 * 109.46790 * 299.99708 * 9 8 6 11 11 F 1.39895 * 109.47572 * 299.99956 * 10 9 8 12 12 C 1.53003 * 109.46724 * 179.97438 * 10 9 8 13 13 S 1.81402 * 109.46881 * 60.00322 * 12 10 9 14 14 O 1.42103 * 110.54243 * 62.04099 * 13 12 10 15 15 O 1.42099 * 110.54578 * 285.28936 * 13 12 10 16 16 O 1.52201 * 104.44984 * 173.66309 * 13 12 10 17 17 C 1.35901 * 114.00082 * 74.09589 * 16 13 12 18 18 C 1.38727 * 120.04133 * 95.65340 * 17 16 13 19 19 C 1.50706 * 119.99964 * 0.02562 * 18 17 16 20 20 O 1.42905 * 109.47336 * 75.53577 * 19 18 17 21 21 Si 1.86306 * 109.46661 * 195.53051 * 19 18 17 22 22 C 1.38171 * 119.99588 * 180.02562 * 18 17 16 23 23 C 1.38208 * 120.08001 * 359.97438 * 22 18 17 24 24 C 1.38516 * 120.08441 * 0.03859 * 23 22 18 25 25 F 1.35100 * 119.99877 * 179.97438 * 24 23 22 26 26 C 1.38346 * 120.00579 * 359.95942 * 24 23 22 27 27 C 1.52998 * 109.47137 * 60.00572 * 10 9 8 28 28 C 1.53003 * 109.46559 * 299.99177 * 27 10 9 29 29 H 1.08995 * 109.47260 * 59.99729 * 1 2 3 30 30 H 1.08998 * 109.47226 * 180.02562 * 1 2 3 31 31 H 1.09006 * 109.46973 * 299.99980 * 1 2 3 32 32 H 1.09002 * 109.47371 * 240.00268 * 2 1 3 33 33 H 1.08996 * 109.47540 * 119.99807 * 2 1 3 34 34 H 1.08997 * 109.46707 * 299.99977 * 8 6 4 35 35 H 1.09007 * 109.47163 * 59.99801 * 8 6 4 36 36 H 1.08998 * 109.47026 * 179.97438 * 9 8 6 37 37 H 1.08997 * 109.46936 * 60.00055 * 9 8 6 38 38 H 1.08996 * 109.47778 * 300.00501 * 12 10 9 39 39 H 1.09006 * 109.46818 * 179.97438 * 12 10 9 40 40 H 1.08993 * 109.47243 * 315.52675 * 19 18 17 41 41 H 0.96702 * 114.00143 * 66.08132 * 20 19 18 42 42 H 1.48502 * 109.99696 * 179.97438 * 21 19 18 43 43 H 1.48497 * 110.00100 * 301.31824 * 21 19 18 44 44 H 1.08006 * 119.96284 * 180.02562 * 22 18 17 45 45 H 1.08003 * 119.95957 * 180.02562 * 23 22 18 46 46 H 1.08001 * 120.03820 * 180.29390 * 26 24 23 47 47 H 1.08994 * 109.47837 * 59.99407 * 27 10 9 48 48 H 1.09001 * 109.47232 * 180.02562 * 27 10 9 49 49 H 1.09003 * 109.47176 * 179.97438 * 28 27 10 50 50 H 1.08996 * 109.47778 * 300.00069 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9206 2.9375 -0.0012 7 1 3.5844 3.4693 -0.8911 8 6 3.4496 3.6848 1.2481 9 6 4.0348 5.0984 1.2478 10 6 5.5627 5.0178 1.2476 11 9 5.9939 4.3348 2.3898 12 6 6.1479 6.4314 1.2467 13 16 5.5894 7.3180 2.7275 14 8 6.0555 6.6691 3.9026 15 8 4.2281 7.7033 2.5943 16 8 6.3564 8.6322 2.6952 17 6 5.9054 9.5127 1.7633 18 6 5.0011 10.5016 2.1224 19 6 4.5187 10.6003 3.5468 20 8 5.5466 11.1704 4.3595 21 14 3.0022 11.6804 3.6152 22 6 4.5429 11.3959 1.1741 23 6 4.9847 11.3071 -0.1324 24 6 5.8873 10.3209 -0.4947 25 9 6.3177 10.2354 -1.7724 26 6 6.3485 9.4236 0.4520 27 6 6.0338 4.2706 -0.0017 28 6 5.4485 2.8569 -0.0013 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 1.8933 -0.5138 -0.8900 33 1 1.8933 -0.5138 0.8899 34 1 2.3611 3.7418 1.2484 35 1 3.7859 3.1528 2.1381 36 1 3.6988 5.6309 2.1375 37 1 3.6989 5.6305 0.3578 38 1 5.8120 6.9633 0.3565 39 1 7.2365 6.3740 1.2470 40 1 4.2729 9.6050 3.9169 41 1 5.7512 12.0912 4.1464 42 1 2.5162 11.7853 5.0145 43 1 3.3161 13.0309 3.0835 44 1 3.8392 12.1658 1.4544 45 1 4.6255 12.0075 -0.8720 46 1 7.0560 8.6574 0.1711 47 1 5.6979 4.8027 -0.8917 48 1 7.1223 4.2127 -0.0016 49 1 5.7838 2.3247 -0.8915 50 1 5.7844 2.3247 0.8886 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10564896_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:50:52 Heat of formation + Delta-G solvation = -279.781738 kcal Electronic energy + Delta-G solvation = -41170.757693 eV Core-core repulsion = 35508.073075 eV Total energy + Delta-G solvation = -5662.684618 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.123 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -50.29341 -49.07653 -42.62846 -41.67218 -39.59583 -39.16795 -38.39659 -37.86274 -37.53029 -37.29388 -34.36069 -32.91485 -32.64524 -32.22389 -31.94818 -29.22186 -27.02177 -25.45248 -24.97895 -24.28824 -23.58536 -23.37702 -22.11573 -21.78731 -20.94675 -19.94526 -19.24620 -19.14861 -18.70874 -18.44179 -17.89739 -17.78243 -17.68241 -17.56972 -17.18564 -16.95898 -16.87332 -16.82415 -16.34648 -16.17518 -16.07510 -15.67666 -15.40828 -15.24210 -15.02268 -14.92842 -14.86393 -14.56215 -14.34029 -14.14995 -13.99264 -13.85374 -13.82741 -13.61360 -13.56607 -13.38883 -13.30849 -13.24213 -13.19037 -13.16985 -12.96986 -12.88260 -12.67321 -12.52098 -12.34706 -12.34043 -12.01191 -11.85647 -11.81199 -11.50210 -11.32593 -11.21719 -10.86360 -10.61367 -10.14102 -5.07900 -1.35869 -0.49519 -0.43338 0.74082 1.07121 1.19852 1.38192 1.61581 1.79967 1.84407 2.22479 2.55555 2.69965 2.73289 2.93564 3.10497 3.12720 3.17789 3.21248 3.29655 3.39736 3.45352 3.47659 3.55736 3.66690 3.71342 3.85655 3.89011 3.95759 3.97122 4.01039 4.07690 4.12494 4.20255 4.29384 4.36999 4.38991 4.43143 4.46645 4.54009 4.58064 4.61378 4.67560 4.69799 4.74385 4.80321 4.81696 4.86500 4.98010 5.02139 5.13472 5.26881 5.48097 6.27349 6.75623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.356 6.356 4 C 0.466 3.534 5 O -0.503 6.503 6 C -0.082 4.082 7 H 0.115 0.885 8 C -0.112 4.112 9 C -0.165 4.165 10 C 0.137 3.863 11 F -0.187 7.187 12 C -0.690 4.690 13 S 2.590 3.410 14 O -0.898 6.898 15 O -0.937 6.937 16 O -0.650 6.650 17 C 0.122 3.878 18 C -0.094 4.094 19 C -0.094 4.094 20 O -0.517 6.517 21 Si 0.705 3.295 22 C -0.075 4.075 23 C -0.127 4.127 24 C 0.131 3.869 25 F -0.123 7.123 26 C -0.181 4.181 27 C -0.128 4.128 28 C -0.110 4.110 29 H 0.067 0.933 30 H 0.081 0.919 31 H 0.068 0.932 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.094 0.906 35 H 0.081 0.919 36 H 0.091 0.909 37 H 0.104 0.896 38 H 0.156 0.844 39 H 0.155 0.845 40 H 0.123 0.877 41 H 0.375 0.625 42 H -0.247 1.247 43 H -0.250 1.250 44 H 0.156 0.844 45 H 0.156 0.844 46 H 0.156 0.844 47 H 0.091 0.909 48 H 0.089 0.911 49 H 0.085 0.915 50 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.384 4.075 -6.718 8.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.273 6.273 4 C 0.309 3.691 5 O -0.390 6.390 6 C -0.101 4.101 7 H 0.133 0.867 8 C -0.149 4.149 9 C -0.203 4.203 10 C 0.117 3.883 11 F -0.167 7.167 12 C -0.816 4.816 13 S 2.683 3.317 14 O -0.897 6.897 15 O -0.936 6.936 16 O -0.609 6.609 17 C 0.080 3.920 18 C -0.097 4.097 19 C -0.203 4.203 20 O -0.323 6.323 21 Si 0.604 3.396 22 C -0.093 4.093 23 C -0.146 4.146 24 C 0.111 3.889 25 F -0.101 7.101 26 C -0.201 4.201 27 C -0.167 4.167 28 C -0.148 4.148 29 H 0.086 0.914 30 H 0.100 0.900 31 H 0.087 0.913 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.113 0.887 35 H 0.100 0.900 36 H 0.109 0.891 37 H 0.122 0.878 38 H 0.174 0.826 39 H 0.173 0.827 40 H 0.141 0.859 41 H 0.223 0.777 42 H -0.171 1.171 43 H -0.175 1.175 44 H 0.173 0.827 45 H 0.174 0.826 46 H 0.174 0.826 47 H 0.110 0.890 48 H 0.108 0.892 49 H 0.104 0.896 50 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -4.680 4.012 -5.384 8.185 hybrid contribution 1.826 -0.172 -0.596 1.929 sum -2.854 3.840 -5.980 7.659 Atomic orbital electron populations 1.21820 0.92285 1.03276 1.03677 1.23090 0.95618 0.79800 1.02775 1.86496 1.24280 1.32801 1.83771 1.23590 0.80765 0.92411 0.72346 1.90697 1.60466 1.43045 1.44818 1.21165 0.96646 0.90250 1.02051 0.86729 1.21505 1.02453 0.93967 0.97015 1.22585 0.91902 0.99567 1.06239 1.20476 0.94865 0.87357 0.85555 1.93000 1.91121 1.81016 1.51557 1.31667 1.14630 1.09844 1.25418 1.05844 0.74659 0.74324 0.76831 1.93720 1.80800 1.73238 1.41909 1.93661 1.34277 1.78751 1.86879 1.85802 1.72395 1.42166 1.60502 1.17392 0.96968 0.92732 0.84885 1.20522 0.96077 0.94987 0.98159 1.25249 1.00318 1.07623 0.87091 1.86732 1.55619 1.31091 1.58848 0.94452 0.81563 0.78507 0.85031 1.21062 0.98619 0.97927 0.91643 1.21408 0.97183 0.98309 0.97745 1.17219 0.96319 0.96174 0.79162 1.91600 1.88144 1.95542 1.34812 1.21336 1.03742 1.03484 0.91570 1.22103 1.02630 0.95928 0.96024 1.21493 0.91690 0.96356 1.05229 0.91366 0.90021 0.91304 0.91117 0.91061 0.88710 0.90021 0.89057 0.87757 0.82607 0.82733 0.85900 0.77734 1.17142 1.17549 0.82666 0.82632 0.82608 0.89040 0.89210 0.89605 0.89697 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.15 0.38 0.65 16 2 C 0.06 0.01 6.19 37.15 0.23 0.24 16 3 O -0.36 -0.47 10.12 -39.24 -0.40 -0.87 16 4 C 0.47 0.86 7.25 36.00 0.26 1.12 16 5 O -0.50 -2.45 15.73 -18.75 -0.29 -2.75 16 6 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 7 H 0.11 -0.39 8.14 -51.93 -0.42 -0.82 16 8 C -0.11 0.13 5.01 -26.73 -0.13 -0.01 16 9 C -0.17 0.26 4.56 -26.73 -0.12 0.14 16 10 C 0.14 -0.11 0.88 -90.62 -0.08 -0.19 16 11 F -0.19 -0.48 14.81 2.25 0.03 -0.45 16 12 C -0.69 1.57 4.27 37.16 0.16 1.73 16 13 S 2.59 4.56 4.20 -107.50 -0.45 4.11 16 14 O -0.90 -5.45 17.31 -67.04 -1.16 -6.61 16 15 O -0.94 -1.56 13.16 -67.04 -0.88 -2.44 16 16 O -0.65 -1.23 9.40 -51.75 -0.49 -1.72 16 17 C 0.12 0.03 4.71 -39.23 -0.18 -0.16 16 18 C -0.09 0.03 4.83 -104.46 -0.50 -0.47 16 19 C -0.09 -0.06 2.33 36.01 0.08 0.02 16 20 O -0.52 -0.89 12.94 -35.23 -0.46 -1.35 16 21 Si 0.71 -1.28 30.17 -169.99 -5.13 -6.41 16 22 C -0.07 0.22 8.65 -39.62 -0.34 -0.12 16 23 C -0.13 0.44 10.02 -39.49 -0.40 0.05 16 24 C 0.13 -0.29 7.30 -39.44 -0.29 -0.58 16 25 F -0.12 0.17 17.27 2.25 0.04 0.21 16 26 C -0.18 0.36 8.37 -39.37 -0.33 0.03 16 27 C -0.13 0.33 5.00 -26.73 -0.13 0.19 16 28 C -0.11 0.09 4.37 -26.73 -0.12 -0.03 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.07 0.02 8.13 -51.93 -0.42 -0.41 16 33 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 34 H 0.09 -0.20 8.11 -51.93 -0.42 -0.62 16 35 H 0.08 0.01 7.80 -51.93 -0.41 -0.39 16 36 H 0.09 -0.07 5.76 -51.93 -0.30 -0.37 16 37 H 0.10 -0.44 8.14 -51.93 -0.42 -0.87 16 38 H 0.16 -0.87 6.60 -51.93 -0.34 -1.21 16 39 H 0.15 -0.64 8.14 -51.92 -0.42 -1.07 16 40 H 0.12 0.23 6.08 -51.93 -0.32 -0.09 16 41 H 0.38 -0.88 8.59 45.56 0.39 -0.49 16 42 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 43 H -0.25 0.50 6.67 56.52 0.38 0.87 16 44 H 0.16 -0.79 4.86 -52.48 -0.26 -1.04 16 45 H 0.16 -0.91 8.06 -52.48 -0.42 -1.33 16 46 H 0.16 -0.71 7.01 -52.49 -0.37 -1.08 16 47 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 48 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 49 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 50 H 0.08 0.09 7.76 -51.93 -0.40 -0.31 16 LS Contribution 415.66 15.07 6.26 6.26 Total: 0.00 -11.51 415.66 -11.39 -22.90 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -6.71 Total: -13.37 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: -1.76 Total: 2.47 kcal Atomic # 8 Polarization: -12.05 SS G_CDS: -3.68 Total: -15.73 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.07 Total: -0.24 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.13 Total: -6.41 kcal Atomic # 16 Polarization: 4.56 SS G_CDS: -0.45 Total: 4.11 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -11.51 -11.39 -22.90 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10564896_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -256.886 kcal (2) G-P(sol) polarization free energy of solvation -11.508 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -268.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.896 kcal (6) G-S(sol) free energy of system = (1) + (5) -279.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds