Wall clock time and date at job start Mon Mar 8 2021 08:24:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33382 * 125.20148 * 2 1 4 4 C 1.50704 * 122.53984 * 0.02605 * 3 2 1 5 5 O 1.42899 * 109.47089 * 75.76858 * 4 3 2 6 6 Si 1.86297 * 109.47247 * 315.76571 * 4 3 2 7 7 C 1.38425 * 114.92081 * 180.29101 * 3 2 1 8 8 S 1.76198 * 122.54102 * 179.72942 * 7 3 2 9 9 O 1.42103 * 106.40063 * 23.86698 * 8 7 3 10 10 O 1.42101 * 106.40400 * 156.78183 * 8 7 3 11 11 N 1.65590 * 107.22115 * 270.32881 * 8 7 3 12 12 C 1.46506 * 120.00244 * 63.67541 * 11 8 7 13 13 H 1.08996 * 112.84757 * 14.44392 * 12 11 8 14 14 C 1.53782 * 113.61414 * 145.64004 * 12 11 8 15 15 C 1.53782 * 87.07998 * 89.11485 * 14 12 11 16 16 H 1.09000 * 113.61886 * 270.88212 * 15 14 12 17 17 C 1.50707 * 113.61133 * 140.06207 * 15 14 12 18 18 C 1.38327 * 120.00372 * 120.00244 * 17 15 14 19 19 Cl 1.73597 * 120.01409 * 359.95168 * 18 17 15 20 20 C 1.38377 * 119.97055 * 179.97438 * 18 17 15 21 21 C 1.38184 * 119.98694 * 0.02562 * 20 18 17 22 22 C 1.38262 * 120.01815 * 359.97438 * 21 20 18 23 23 C 1.38228 * 120.02234 * 359.74814 * 22 21 20 24 24 C 1.53784 * 113.61436 * 243.13895 * 12 11 8 25 25 C 1.33383 * 114.91974 * 359.49722 * 7 3 2 26 26 C 1.50702 * 125.20533 * 180.20798 * 25 7 3 27 27 S 1.75886 * 125.20308 * 180.02562 * 2 1 3 28 28 H 1.09000 * 109.47009 * 84.53513 * 1 2 3 29 29 H 1.09003 * 109.46640 * 204.53164 * 1 2 3 30 30 H 1.08998 * 109.47273 * 324.52931 * 1 2 3 31 31 H 1.09000 * 109.46866 * 195.76683 * 4 3 2 32 32 H 0.96706 * 114.00101 * 299.99983 * 5 4 3 33 33 H 1.48494 * 110.00077 * 174.83628 * 6 4 3 34 34 H 1.48503 * 110.00050 * 296.15642 * 6 4 3 35 35 H 0.97005 * 120.00180 * 243.67605 * 11 8 7 36 36 H 1.09004 * 113.61013 * 203.66178 * 14 12 11 37 37 H 1.08997 * 113.61289 * 334.48325 * 14 12 11 38 38 H 1.08000 * 120.00420 * 179.97438 * 20 18 17 39 39 H 1.08003 * 119.99121 * 179.97438 * 21 20 18 40 40 H 1.07996 * 119.99172 * 180.02562 * 22 21 20 41 41 H 1.07998 * 119.99380 * 180.27468 * 23 22 21 42 42 H 1.09000 * 113.61433 * 25.42791 * 24 12 11 43 43 H 1.08993 * 113.61493 * 156.33518 * 24 12 11 44 44 H 1.09007 * 109.47466 * 184.24363 * 26 25 7 45 45 H 1.08995 * 109.46985 * 304.24551 * 26 25 7 46 46 H 1.09005 * 109.47101 * 64.24324 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2759 1.0899 0.0000 4 6 1.7051 2.4847 0.0006 5 8 1.2186 2.7997 1.3068 6 14 0.3047 2.5830 -1.2241 7 6 3.6379 0.8429 -0.0064 8 16 4.8355 2.1352 -0.0146 9 8 4.1966 3.2778 0.5382 10 8 6.0299 1.5790 0.5178 11 7 5.1542 2.4983 -1.5985 12 6 4.0943 3.0380 -2.4539 13 1 3.2306 3.3873 -1.8882 14 6 4.5991 4.0506 -3.4954 15 6 4.8217 2.8540 -4.4353 16 1 5.8091 2.4021 -4.3406 17 6 4.4399 3.1314 -5.8665 18 6 5.3896 3.0328 -6.8674 19 17 7.0219 2.5907 -6.4750 20 6 5.0382 3.2871 -8.1814 21 6 3.7389 3.6399 -8.4929 22 6 2.7900 3.7383 -7.4921 23 6 3.1391 3.4788 -6.1801 24 6 3.7304 2.1232 -3.6352 25 6 3.9751 -0.4476 -0.0009 26 6 5.3861 -0.9770 -0.0015 27 16 2.5210 -1.4372 -0.0006 28 1 -0.3633 0.0979 -1.0230 29 1 -0.3633 -0.9349 0.4267 30 1 -0.3634 0.8369 0.5963 31 1 2.4827 3.1956 -0.2788 32 1 0.5226 2.2064 1.6210 33 1 -0.3471 3.9149 -1.1444 34 1 0.8149 2.3487 -2.5989 35 1 6.0427 2.3536 -1.9600 36 1 3.8298 4.7408 -3.8419 37 1 5.5200 4.5552 -3.2032 38 1 5.7793 3.2107 -8.9632 39 1 3.4646 3.8388 -9.5184 40 1 1.7747 4.0137 -7.7361 41 1 2.3965 3.5515 -5.3993 42 1 3.9509 1.0708 -3.4566 43 1 2.7238 2.2865 -4.0199 44 1 5.3661 -2.0646 -0.0723 45 1 5.9274 -0.5673 -0.8541 46 1 5.8852 -0.6821 0.9216 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10565096_15065288.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:24:34 Heat of formation + Delta-G solvation = -16.381126 kcal Electronic energy + Delta-G solvation = -34216.712027 eV Core-core repulsion = 29739.651966 eV Total energy + Delta-G solvation = -4477.060061 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.056 amu Computer time = 2.42 seconds Orbital eigenvalues (eV) -41.47656 -40.35880 -39.45854 -38.41282 -37.45318 -37.08609 -36.86298 -34.49855 -34.33547 -31.79532 -31.62250 -31.04146 -28.10198 -26.93346 -26.33868 -25.94496 -23.87315 -23.22501 -22.87073 -21.03957 -20.57206 -20.03356 -19.12190 -18.65981 -18.19356 -17.88116 -17.32128 -16.96148 -16.71441 -16.51096 -16.07080 -16.00328 -15.76316 -15.56789 -15.20153 -15.06077 -14.93103 -14.69801 -14.61024 -14.45823 -14.28830 -14.10870 -14.02356 -13.71997 -13.59395 -13.49647 -13.45829 -13.18860 -13.05009 -12.88530 -12.77034 -12.72434 -12.61661 -12.57168 -12.23230 -12.12634 -12.04787 -11.68273 -11.67551 -11.57846 -11.36899 -10.68785 -10.45047 -10.01946 -9.95646 -9.68180 -9.52475 -5.02020 -0.76047 -0.45525 0.07608 0.16596 0.35031 0.65396 0.81696 1.12223 1.25254 1.54034 1.90477 1.96959 2.50473 2.69189 3.18028 3.25091 3.36568 3.41600 3.45245 3.49776 3.67003 3.69549 3.76940 3.89009 3.92263 3.94198 3.95797 4.02907 4.17656 4.21878 4.25747 4.26311 4.39748 4.42346 4.51629 4.52796 4.58483 4.59912 4.69249 4.74942 4.78796 4.83566 4.84871 4.90405 5.01997 5.14292 5.16701 5.18786 5.34117 5.38385 5.71006 5.78157 6.61313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.191 4.191 3 C -0.066 4.066 4 C -0.074 4.074 5 O -0.518 6.518 6 Si 0.641 3.359 7 C -0.681 4.681 8 S 2.701 3.299 9 O -0.936 6.936 10 O -0.951 6.951 11 N -1.097 6.097 12 C 0.120 3.880 13 H 0.100 0.900 14 C -0.131 4.131 15 C -0.079 4.079 16 H 0.109 0.891 17 C -0.062 4.062 18 C -0.032 4.032 19 Cl -0.067 7.067 20 C -0.108 4.108 21 C -0.110 4.110 22 C -0.111 4.111 23 C -0.108 4.108 24 C -0.148 4.148 25 C -0.047 4.047 26 C -0.113 4.113 27 S 0.167 5.833 28 H 0.093 0.907 29 H 0.090 0.910 30 H 0.086 0.914 31 H 0.136 0.864 32 H 0.368 0.632 33 H -0.239 1.239 34 H -0.242 1.242 35 H 0.421 0.579 36 H 0.099 0.901 37 H 0.086 0.914 38 H 0.134 0.866 39 H 0.133 0.867 40 H 0.130 0.870 41 H 0.130 0.870 42 H 0.082 0.918 43 H 0.098 0.902 44 H 0.080 0.920 45 H 0.090 0.910 46 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.898 -4.114 -4.196 7.650 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.309 4.309 3 C -0.076 4.076 4 C -0.187 4.187 5 O -0.322 6.322 6 Si 0.540 3.460 7 C -0.780 4.780 8 S 2.789 3.211 9 O -0.926 6.926 10 O -0.941 6.941 11 N -0.856 5.856 12 C 0.012 3.988 13 H 0.118 0.882 14 C -0.170 4.170 15 C -0.097 4.097 16 H 0.127 0.873 17 C -0.062 4.062 18 C -0.059 4.059 19 Cl -0.038 7.038 20 C -0.126 4.126 21 C -0.129 4.129 22 C -0.129 4.129 23 C -0.126 4.126 24 C -0.187 4.187 25 C -0.169 4.169 26 C -0.171 4.171 27 S 0.433 5.567 28 H 0.111 0.889 29 H 0.109 0.891 30 H 0.104 0.896 31 H 0.153 0.847 32 H 0.215 0.785 33 H -0.163 1.163 34 H -0.166 1.166 35 H 0.257 0.743 36 H 0.117 0.883 37 H 0.104 0.896 38 H 0.152 0.848 39 H 0.151 0.849 40 H 0.148 0.852 41 H 0.148 0.852 42 H 0.101 0.899 43 H 0.116 0.884 44 H 0.099 0.901 45 H 0.108 0.892 46 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -4.756 -4.435 -4.097 7.686 hybrid contribution 0.970 0.811 -0.338 1.309 sum -3.786 -3.624 -4.435 6.865 Atomic orbital electron populations 1.20332 0.87214 1.03811 1.03647 1.24325 1.00229 0.95246 1.11087 1.18591 0.90590 0.96844 1.01618 1.25496 1.06165 0.93073 0.93922 1.86687 1.57997 1.56533 1.31004 0.95261 0.85256 0.86832 0.78619 1.29445 1.11888 1.13289 1.23419 1.01827 0.73255 0.73881 0.72159 1.93607 1.76223 1.47549 1.75224 1.93603 1.44812 1.79583 1.76084 1.55402 1.19664 1.79689 1.30828 1.21731 0.89910 0.95639 0.91522 0.88242 1.23402 1.03170 0.96075 0.94333 1.21686 1.00567 0.98073 0.89421 0.87283 1.19536 0.92809 0.99522 0.94373 1.20858 0.86274 1.04290 0.94484 1.98376 1.19830 1.91262 1.94289 1.21112 0.97351 0.99512 0.94641 1.21173 0.92425 0.99228 1.00039 1.21286 1.00015 0.98895 0.92709 1.20996 0.95103 0.99525 0.96954 1.23661 0.99442 1.00167 0.95401 1.24580 1.00775 0.95027 0.96487 1.20914 0.88320 1.01976 1.05939 1.84381 0.94946 1.08099 1.69258 0.88899 0.89122 0.89601 0.84742 0.78533 1.16345 1.16590 0.74335 0.88258 0.89552 0.84815 0.84950 0.85224 0.85175 0.89936 0.88414 0.90091 0.89167 0.87150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.41 8.22 36.01 0.30 0.70 16 2 C -0.19 0.20 6.11 -36.00 -0.22 -0.02 16 3 C -0.07 -0.06 4.69 -106.25 -0.50 -0.56 16 4 C -0.07 -0.12 1.92 36.01 0.07 -0.05 16 5 O -0.52 -1.32 12.88 -35.23 -0.45 -1.77 16 6 Si 0.64 -0.51 26.80 -169.99 -4.56 -5.07 16 7 C -0.68 -1.10 5.84 -41.21 -0.24 -1.34 16 8 S 2.70 7.03 5.41 -107.50 -0.58 6.45 16 9 O -0.94 -5.34 14.39 -57.17 -0.82 -6.17 16 10 O -0.95 -4.02 15.18 -57.17 -0.87 -4.88 16 11 N -1.10 0.47 5.73 -4.19 -0.02 0.45 16 12 C 0.12 -0.08 4.49 -67.11 -0.30 -0.38 16 13 H 0.10 -0.03 4.82 -51.93 -0.25 -0.28 16 14 C -0.13 0.15 7.33 -25.92 -0.19 -0.04 16 15 C -0.08 0.08 3.59 -90.95 -0.33 -0.25 16 16 H 0.11 -0.12 6.54 -51.93 -0.34 -0.46 16 17 C -0.06 0.00 5.29 -104.59 -0.55 -0.56 16 18 C -0.03 -0.03 6.31 -39.50 -0.25 -0.27 16 19 Cl -0.07 -0.06 27.16 -51.86 -1.41 -1.47 16 20 C -0.11 -0.01 9.83 -39.55 -0.39 -0.40 16 21 C -0.11 0.09 10.04 -39.59 -0.40 -0.31 16 22 C -0.11 0.11 10.05 -39.58 -0.40 -0.28 16 23 C -0.11 0.08 8.63 -39.59 -0.34 -0.26 16 24 C -0.15 0.21 7.26 -25.92 -0.19 0.02 16 25 C -0.05 -0.02 6.49 -36.00 -0.23 -0.26 16 26 C -0.11 0.08 8.68 36.01 0.31 0.39 16 27 S 0.17 -0.17 23.31 -107.50 -2.51 -2.67 16 28 H 0.09 -0.53 6.41 -51.93 -0.33 -0.87 16 29 H 0.09 -0.50 8.14 -51.93 -0.42 -0.92 16 30 H 0.09 -0.51 4.90 -51.93 -0.25 -0.76 16 31 H 0.14 0.41 2.86 -51.93 -0.15 0.27 16 32 H 0.37 -0.76 7.14 45.56 0.33 -0.43 16 33 H -0.24 -0.48 7.11 56.52 0.40 -0.08 16 34 H -0.24 0.09 7.03 56.52 0.40 0.49 16 35 H 0.42 -0.99 8.79 -34.47 -0.30 -1.30 16 36 H 0.10 -0.18 7.73 -51.93 -0.40 -0.58 16 37 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 40 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 41 H 0.13 -0.28 6.65 -52.49 -0.35 -0.63 16 42 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 43 H 0.10 -0.18 6.23 -51.93 -0.32 -0.50 16 44 H 0.08 -0.20 8.14 -51.92 -0.42 -0.63 16 45 H 0.09 -0.16 7.98 -51.93 -0.41 -0.57 16 46 H 0.11 0.03 7.18 -51.93 -0.37 -0.34 16 LS Contribution 393.76 15.07 5.93 5.93 Total: 0.00 -9.44 393.76 -14.46 -23.90 By element: Atomic # 1 Polarization: -5.50 SS G_CDS: -5.33 Total: -10.82 kcal Atomic # 6 Polarization: -0.02 SS G_CDS: -3.85 Total: -3.87 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.02 Total: 0.45 kcal Atomic # 8 Polarization: -10.68 SS G_CDS: -2.14 Total: -12.82 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -4.56 Total: -5.07 kcal Atomic # 16 Polarization: 6.86 SS G_CDS: -3.09 Total: 3.77 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -1.41 Total: -1.47 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -9.44 -14.46 -23.90 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10565096_15065288.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.518 kcal (2) G-P(sol) polarization free energy of solvation -9.437 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.918 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.463 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.900 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.381 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.43 seconds