Wall clock time and date at job start Mon Mar 8 2021 08:24:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.47007 * 2 1 4 4 C 1.50695 * 109.47428 * 239.99699 * 2 1 3 5 5 C 1.38211 * 120.00224 * 282.40452 * 4 2 1 6 6 S 1.76202 * 119.99883 * 359.97438 * 5 4 2 7 7 O 1.42099 * 106.40324 * 315.55370 * 6 5 4 8 8 O 1.42100 * 106.40108 * 182.63215 * 6 5 4 9 9 N 1.65602 * 107.21572 * 69.09365 * 6 5 4 10 10 C 1.46503 * 120.00054 * 63.26922 * 9 6 5 11 11 H 1.09004 * 112.85093 * 347.11583 * 10 9 6 12 12 C 1.53786 * 113.61293 * 118.30592 * 10 9 6 13 13 C 1.54060 * 86.98017 * 89.16354 * 12 10 9 14 14 H 1.08998 * 113.61012 * 270.88173 * 13 12 10 15 15 C 1.50703 * 113.69293 * 139.99057 * 13 12 10 16 16 C 1.38332 * 120.00494 * 142.46233 * 15 13 12 17 17 Cl 1.73597 * 120.01373 * 0.02562 * 16 15 13 18 18 C 1.38374 * 119.96983 * 179.97438 * 16 15 13 19 19 C 1.38191 * 119.99096 * 0.02562 * 18 16 15 20 20 C 1.38271 * 120.00949 * 0.02562 * 19 18 16 21 21 C 1.38217 * 120.02513 * 359.70713 * 20 19 18 22 22 C 1.53781 * 87.07868 * 25.43384 * 13 12 10 23 23 C 1.38264 * 120.00225 * 180.27658 * 5 4 2 24 24 C 1.38221 * 119.99504 * 359.46430 * 23 5 4 25 25 C 1.38253 * 120.00294 * 0.53501 * 24 23 5 26 26 C 1.38222 * 119.99689 * 359.74311 * 25 24 23 27 27 H 0.96705 * 114.00049 * 185.13874 * 1 2 3 28 28 H 1.09004 * 109.46995 * 119.99992 * 2 1 3 29 29 H 1.48494 * 109.99974 * 58.67973 * 3 2 1 30 30 H 1.48500 * 109.99967 * 179.97438 * 3 2 1 31 31 H 0.96999 * 120.00070 * 243.27173 * 9 6 5 32 32 H 1.08994 * 113.61225 * 203.66503 * 12 10 9 33 33 H 1.08998 * 113.61290 * 334.57412 * 12 10 9 34 34 H 1.08003 * 120.00470 * 179.97438 * 18 16 15 35 35 H 1.07996 * 120.00105 * 179.97438 * 19 18 16 36 36 H 1.07996 * 119.98352 * 179.97438 * 20 19 18 37 37 H 1.08001 * 119.99048 * 180.29833 * 21 20 19 38 38 H 1.08997 * 113.60829 * 220.02477 * 22 13 12 39 39 H 1.08996 * 113.69372 * 89.12674 * 22 13 12 40 40 H 1.07993 * 120.00196 * 179.72624 * 23 5 4 41 41 H 1.07997 * 119.99746 * 180.29809 * 24 23 5 42 42 H 1.07992 * 120.00450 * 179.76905 * 25 24 23 43 43 H 1.08000 * 119.99970 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.9194 -2.0914 -1.2843 6 16 1.3172 -3.0214 0.0858 7 8 1.8770 -2.4291 1.2499 8 8 1.4928 -4.3908 -0.2505 9 7 -0.3168 -2.7666 0.1710 10 6 -1.1841 -3.2007 -0.9270 11 1 -0.6278 -3.4685 -1.8253 12 6 -2.2251 -4.2532 -0.5104 13 6 -3.1583 -3.0762 -0.1679 14 1 -3.0527 -2.7192 0.8565 15 6 -4.5944 -3.3074 -0.5620 16 6 -5.6167 -2.8521 0.2512 17 17 -5.2459 -2.0138 1.7254 18 6 -6.9351 -3.0644 -0.1116 19 6 -7.2297 -3.7313 -1.2855 20 6 -6.2073 -4.1870 -2.0973 21 6 -4.8903 -3.9705 -1.7382 22 6 -2.3635 -2.2503 -1.1932 23 6 2.3856 -2.7434 -2.4109 24 6 2.8535 -2.0137 -3.4876 25 6 2.8655 -0.6323 -3.4337 26 6 2.4047 0.0193 -2.3051 27 1 -0.3933 -0.8799 0.0791 28 1 1.7923 -0.5139 0.8900 29 1 1.5354 2.4771 1.1920 30 1 3.5349 1.7702 0.0006 31 1 -0.6997 -2.3298 0.9479 32 1 -2.5815 -4.8663 -1.3382 33 1 -1.9272 -4.8427 0.3566 34 1 -7.7337 -2.7095 0.5230 35 1 -8.2586 -3.8974 -1.5686 36 1 -6.4381 -4.7085 -3.0144 37 1 -4.0922 -4.3224 -2.3751 38 1 -2.1772 -1.2241 -0.8768 39 1 -2.7566 -2.3159 -2.2077 40 1 2.3804 -3.8226 -2.4513 41 1 3.2132 -2.5229 -4.3695 42 1 3.2344 -0.0623 -4.2734 43 1 2.4137 1.0984 -2.2631 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10565096_2726874.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:24:39 Heat of formation + Delta-G solvation = -16.257948 kcal Electronic energy + Delta-G solvation = -31036.578019 eV Core-core repulsion = 26781.446291 eV Total energy + Delta-G solvation = -4255.131728 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.068 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.49338 -40.81365 -39.50916 -38.71810 -37.52434 -37.40461 -37.06076 -34.61161 -32.92750 -32.53638 -31.75542 -31.64453 -27.11421 -26.80816 -26.32782 -24.53851 -23.85237 -23.07388 -22.73349 -21.12272 -20.43585 -19.63912 -18.98965 -18.19263 -17.99037 -17.43954 -17.23967 -16.90218 -16.58784 -16.49249 -15.97991 -15.91843 -15.48540 -15.43098 -15.09989 -14.99515 -14.89930 -14.67905 -14.44355 -14.03255 -13.82233 -13.70301 -13.58228 -13.53967 -13.26204 -13.21294 -12.95604 -12.88962 -12.73093 -12.55096 -12.29503 -12.19519 -12.05270 -11.92165 -11.56773 -11.49144 -11.41124 -11.14661 -10.74150 -10.60762 -10.13450 -9.91728 -9.64170 -4.93439 -0.91706 -0.42419 0.03322 0.11505 0.20610 1.16842 1.29001 1.59170 1.67057 1.98220 2.21435 2.50660 2.54481 3.10636 3.22644 3.31289 3.40341 3.44096 3.57290 3.63211 3.69665 3.75159 3.78827 3.83617 3.96563 3.97107 4.05189 4.12905 4.24724 4.29200 4.36226 4.45841 4.48416 4.55935 4.62656 4.66230 4.73290 4.82305 4.84477 4.87013 4.90718 5.03549 5.14657 5.15701 5.21240 5.36863 5.40328 5.55073 5.59443 5.75121 6.26137 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.147 4.147 3 Si 0.755 3.245 4 C -0.005 4.005 5 C -0.674 4.674 6 S 2.687 3.313 7 O -0.950 6.950 8 O -0.943 6.943 9 N -1.101 6.101 10 C 0.122 3.878 11 H 0.109 0.891 12 C -0.140 4.140 13 C -0.083 4.083 14 H 0.108 0.892 15 C -0.061 4.061 16 C -0.033 4.033 17 Cl -0.067 7.067 18 C -0.108 4.108 19 C -0.111 4.111 20 C -0.112 4.112 21 C -0.106 4.106 22 C -0.136 4.136 23 C -0.018 4.018 24 C -0.136 4.136 25 C -0.052 4.052 26 C -0.129 4.129 27 H 0.353 0.647 28 H 0.119 0.881 29 H -0.249 1.249 30 H -0.248 1.248 31 H 0.422 0.578 32 H 0.101 0.899 33 H 0.084 0.916 34 H 0.133 0.867 35 H 0.132 0.868 36 H 0.130 0.870 37 H 0.133 0.867 38 H 0.087 0.913 39 H 0.102 0.898 40 H 0.147 0.853 41 H 0.138 0.862 42 H 0.139 0.861 43 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.435 0.733 -6.847 7.304 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.254 4.254 3 Si 0.652 3.348 4 C -0.007 4.007 5 C -0.761 4.761 6 S 2.778 3.222 7 O -0.940 6.940 8 O -0.933 6.933 9 N -0.865 5.865 10 C 0.015 3.985 11 H 0.127 0.873 12 C -0.179 4.179 13 C -0.102 4.102 14 H 0.126 0.874 15 C -0.062 4.062 16 C -0.060 4.060 17 Cl -0.038 7.038 18 C -0.127 4.127 19 C -0.129 4.129 20 C -0.130 4.130 21 C -0.125 4.125 22 C -0.175 4.175 23 C -0.037 4.037 24 C -0.155 4.155 25 C -0.070 4.070 26 C -0.147 4.147 27 H 0.208 0.792 28 H 0.136 0.864 29 H -0.173 1.173 30 H -0.172 1.172 31 H 0.260 0.740 32 H 0.119 0.881 33 H 0.103 0.897 34 H 0.151 0.849 35 H 0.150 0.850 36 H 0.148 0.852 37 H 0.151 0.849 38 H 0.105 0.895 39 H 0.121 0.879 40 H 0.165 0.835 41 H 0.156 0.844 42 H 0.157 0.843 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.279 1.417 -5.917 6.217 hybrid contribution -0.329 -0.976 0.544 1.165 sum -1.608 0.441 -5.373 5.626 Atomic orbital electron populations 1.86892 1.16015 1.34876 1.96705 1.26419 0.85600 1.16605 0.96780 0.93078 0.78855 0.74894 0.87977 1.19993 0.93013 0.91748 0.95899 1.30625 1.19773 1.06247 1.19479 1.02202 0.72147 0.74058 0.73821 1.93581 1.75804 1.78101 1.46559 1.93611 1.84449 1.30773 1.84463 1.55730 1.25842 1.75520 1.29363 1.21733 0.91538 0.96636 0.88580 0.87296 1.23607 0.94833 0.96212 1.03238 1.21780 0.89572 0.98041 1.00764 0.87442 1.19521 0.94179 0.98133 0.94350 1.20876 0.94412 1.00604 0.90063 1.98380 1.94764 1.76509 1.34099 1.21109 0.94720 0.99272 0.97577 1.21174 0.99997 0.97753 0.94003 1.21287 0.92611 0.99195 0.99890 1.20996 0.97012 0.98659 0.95787 1.23522 0.94361 0.99236 1.00403 1.21049 0.91316 1.00770 0.90556 1.21401 1.00638 0.94341 0.99113 1.21570 0.93317 0.94854 0.97270 1.21162 1.00256 0.99918 0.93376 0.79229 0.86413 1.17342 1.17216 0.74029 0.88070 0.89725 0.84886 0.85028 0.85243 0.84911 0.89466 0.87926 0.83527 0.84399 0.84312 0.84148 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.66 12.61 -35.23 -0.44 -1.11 16 2 C -0.15 -0.25 2.07 36.00 0.07 -0.18 16 3 Si 0.76 0.29 30.22 -169.99 -5.14 -4.85 16 4 C 0.00 -0.01 5.25 -104.63 -0.55 -0.55 16 5 C -0.67 -0.67 5.86 -39.58 -0.23 -0.90 16 6 S 2.69 4.30 5.01 -107.50 -0.54 3.76 16 7 O -0.95 -4.13 15.17 -57.17 -0.87 -5.00 16 8 O -0.94 -3.52 16.77 -57.17 -0.96 -4.48 16 9 N -1.10 1.54 3.39 -4.19 -0.01 1.52 16 10 C 0.12 -0.31 4.39 -67.11 -0.29 -0.61 16 11 H 0.11 -0.40 8.05 -51.93 -0.42 -0.82 16 12 C -0.14 0.32 7.27 -25.77 -0.19 0.13 16 13 C -0.08 0.14 3.58 -90.81 -0.33 -0.18 16 14 H 0.11 -0.15 6.52 -51.93 -0.34 -0.49 16 15 C -0.06 0.03 5.29 -104.59 -0.55 -0.52 16 16 C -0.03 -0.02 6.31 -39.50 -0.25 -0.27 16 17 Cl -0.07 -0.07 27.16 -51.86 -1.41 -1.47 16 18 C -0.11 0.00 9.83 -39.55 -0.39 -0.39 16 19 C -0.11 0.11 10.05 -39.59 -0.40 -0.29 16 20 C -0.11 0.17 10.05 -39.58 -0.40 -0.23 16 21 C -0.11 0.17 8.61 -39.59 -0.34 -0.18 16 22 C -0.14 0.39 7.21 -25.92 -0.19 0.20 16 23 C -0.02 0.00 9.55 -39.58 -0.38 -0.37 16 24 C -0.14 0.21 10.05 -39.58 -0.40 -0.19 16 25 C -0.05 0.10 10.05 -39.58 -0.40 -0.30 16 26 C -0.13 0.09 8.66 -39.58 -0.34 -0.25 16 27 H 0.35 -0.25 3.22 45.56 0.15 -0.11 16 28 H 0.12 0.33 5.05 -51.93 -0.26 0.07 16 29 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 30 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 31 H 0.42 -1.16 7.70 -34.47 -0.27 -1.43 16 32 H 0.10 -0.35 6.34 -51.93 -0.33 -0.68 16 33 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 35 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 36 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 37 H 0.13 -0.48 6.68 -52.49 -0.35 -0.83 16 38 H 0.09 -0.21 6.98 -51.93 -0.36 -0.58 16 39 H 0.10 -0.38 7.72 -51.93 -0.40 -0.78 16 40 H 0.15 -0.18 7.34 -52.49 -0.39 -0.57 16 41 H 0.14 -0.53 8.06 -52.49 -0.42 -0.95 16 42 H 0.14 -0.63 8.06 -52.49 -0.42 -1.06 16 43 H 0.14 -0.44 5.22 -52.49 -0.27 -0.71 16 LS Contribution 367.86 15.07 5.54 5.54 Total: 0.00 -8.86 367.86 -14.34 -23.20 By element: Atomic # 1 Polarization: -7.08 SS G_CDS: -4.97 Total: -12.06 kcal Atomic # 6 Polarization: 0.48 SS G_CDS: -5.54 Total: -5.07 kcal Atomic # 7 Polarization: 1.54 SS G_CDS: -0.01 Total: 1.52 kcal Atomic # 8 Polarization: -8.31 SS G_CDS: -2.27 Total: -10.58 kcal Atomic # 14 Polarization: 0.29 SS G_CDS: -5.14 Total: -4.85 kcal Atomic # 16 Polarization: 4.30 SS G_CDS: -0.54 Total: 3.76 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.41 Total: -1.47 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -8.86 -14.34 -23.20 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10565096_2726874.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.941 kcal (2) G-P(sol) polarization free energy of solvation -8.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.343 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.199 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.258 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds