Wall clock time and date at job start Mon Mar 8 2021 09:10:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45203 * 109.47402 * 2 1 4 4 C 1.34224 * 116.99991 * 180.02562 * 3 2 1 5 5 O 1.20823 * 120.00219 * 0.02562 * 4 3 2 6 6 C 1.50705 * 120.00017 * 179.97438 * 4 3 2 7 7 H 1.09004 * 112.84338 * 48.80739 * 6 4 3 8 8 C 1.53780 * 113.61828 * 179.97438 * 6 4 3 9 9 C 1.53784 * 87.08032 * 89.20118 * 8 6 4 10 10 F 1.39901 * 113.61566 * 270.80491 * 9 8 6 11 11 C 1.52996 * 113.61476 * 139.98125 * 9 8 6 12 12 S 1.81399 * 109.47452 * 185.00341 * 11 9 8 13 13 O 1.42107 * 110.54058 * 68.36997 * 12 11 9 14 14 O 1.42102 * 110.53905 * 291.62875 * 12 11 9 15 15 O 1.52191 * 104.45328 * 179.97438 * 12 11 9 16 16 C 1.35922 * 113.99873 * 74.99959 * 15 12 11 17 17 C 1.38793 * 120.05711 * 270.27739 * 16 15 12 18 18 Br 1.89100 * 120.03664 * 359.97438 * 17 16 15 19 19 C 1.38236 * 119.92849 * 180.22880 * 17 16 15 20 20 C 1.50699 * 119.98033 * 179.76870 * 19 17 16 21 21 O 1.42907 * 109.46603 * 74.72796 * 20 19 17 22 22 Si 1.86298 * 109.47032 * 194.72099 * 20 19 17 23 23 C 1.38253 * 120.04214 * 359.49113 * 19 17 16 24 24 C 1.38287 * 120.11745 * 0.26118 * 23 19 17 25 25 C 1.38138 * 120.06927 * 359.97438 * 24 23 19 26 26 C 1.53773 * 113.69489 * 277.54007 * 6 4 3 27 27 H 1.09006 * 109.46547 * 300.00007 * 1 2 3 28 28 H 1.08999 * 109.47494 * 59.99360 * 1 2 3 29 29 H 1.09003 * 109.47058 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47041 * 239.99997 * 2 1 3 31 31 H 1.08999 * 109.47494 * 120.00640 * 2 1 3 32 32 H 1.09006 * 113.61032 * 334.65759 * 8 6 4 33 33 H 1.08994 * 113.69216 * 203.76302 * 8 6 4 34 34 H 1.09000 * 109.46923 * 64.99862 * 11 9 8 35 35 H 1.08997 * 109.46909 * 305.00384 * 11 9 8 36 36 H 1.08996 * 109.47117 * 314.72709 * 20 19 17 37 37 H 0.96697 * 114.00527 * 59.99993 * 21 20 19 38 38 H 1.48506 * 109.99834 * 58.68765 * 22 20 19 39 39 H 1.48502 * 110.00011 * 180.02562 * 22 20 19 40 40 H 1.07992 * 119.94016 * 180.27240 * 23 19 17 41 41 H 1.07993 * 119.96254 * 180.02562 * 24 23 19 42 42 H 1.08004 * 120.02301 * 180.02562 * 25 24 23 43 43 H 1.08998 * 113.62165 * 156.32376 * 26 6 4 44 44 H 1.09006 * 113.61329 * 25.41690 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0015 6 6 3.9208 2.9374 -0.0012 7 1 3.4715 3.5815 0.7547 8 6 5.4583 2.9681 -0.0011 9 6 5.3805 2.9444 -1.5368 10 9 5.3597 1.6541 -2.0771 11 6 6.4035 3.8567 -2.2164 12 16 6.1177 3.8569 -4.0077 13 8 4.8913 4.5049 -4.3169 14 8 6.4365 2.5886 -4.5636 15 8 7.1847 4.7895 -4.5626 16 6 8.4322 4.2503 -4.5862 17 6 9.2723 4.3935 -3.4907 18 35 8.6830 5.3399 -1.9633 19 6 10.5422 3.8481 -3.5195 20 6 11.4572 4.0074 -2.3327 21 8 11.0314 3.1365 -1.2828 22 14 13.1998 3.5750 -2.8298 23 6 10.9713 3.1517 -4.6341 24 6 10.1339 3.0035 -5.7245 25 6 8.8657 3.5507 -5.7028 26 6 3.9858 3.5786 -1.3973 27 1 -0.3633 0.5139 0.8901 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8899 32 1 5.9128 2.0745 0.4269 33 1 5.8779 3.8903 0.4007 34 1 7.4096 3.4923 -2.0090 35 1 6.2979 4.8710 -1.8316 36 1 11.4242 5.0397 -1.9845 37 1 11.0356 2.1998 -1.5226 38 1 13.6431 4.4526 -3.9427 39 1 14.1120 3.7274 -1.6679 40 1 11.9621 2.7226 -4.6530 41 1 10.4715 2.4587 -6.5937 42 1 8.2122 3.4342 -6.5547 43 1 4.0017 4.6683 -1.3771 44 1 3.2517 3.1779 -2.0964 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10910594_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:10:48 Heat of formation + Delta-G solvation = -176.084585 kcal Electronic energy + Delta-G solvation = -36510.440634 eV Core-core repulsion = 31292.963873 eV Total energy + Delta-G solvation = -5217.476761 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -48.98291 -42.55694 -41.71247 -40.12916 -39.29721 -38.36622 -37.67920 -37.32013 -37.25451 -34.22979 -32.83278 -32.61641 -31.89912 -30.68704 -27.35555 -27.29245 -26.68679 -24.96216 -23.99417 -23.42262 -22.63339 -21.55910 -20.66719 -19.67509 -19.18374 -18.97276 -18.62855 -18.22035 -17.74562 -17.64257 -17.46143 -17.20703 -17.12846 -16.73039 -16.51089 -16.21543 -16.05523 -15.65319 -15.30913 -15.12180 -14.76644 -14.66431 -14.60212 -14.54081 -14.24269 -14.16154 -13.83067 -13.69012 -13.56078 -13.44064 -13.33465 -13.31537 -13.25727 -13.14582 -12.94896 -12.88732 -12.62282 -12.50076 -12.37051 -12.15160 -12.00185 -11.74126 -11.46756 -11.39355 -11.36013 -11.14466 -10.73446 -10.38848 -10.16215 -5.23995 -1.32839 -0.52592 -0.36263 -0.00642 0.77423 1.02681 1.17968 1.46003 1.58139 1.80206 1.91264 2.30293 2.63402 2.65760 2.76545 2.92884 2.98289 3.12695 3.21592 3.25412 3.42185 3.45259 3.51183 3.67578 3.77948 3.83118 3.99924 4.00316 4.03686 4.05940 4.24601 4.26965 4.29591 4.33966 4.41193 4.44179 4.47751 4.52468 4.68964 4.72390 4.75883 4.82071 4.84591 4.93521 5.05584 5.19900 5.50145 6.34191 6.78575 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.474 3.526 5 O -0.488 6.488 6 C -0.112 4.112 7 H 0.131 0.869 8 C -0.120 4.120 9 C 0.099 3.901 10 F -0.166 7.166 11 C -0.676 4.676 12 S 2.587 3.413 13 O -0.910 6.910 14 O -0.929 6.929 15 O -0.656 6.656 16 C 0.094 3.906 17 C -0.095 4.095 18 Br -0.010 7.010 19 C -0.075 4.075 20 C -0.079 4.079 21 O -0.525 6.525 22 Si 0.691 3.309 23 C -0.091 4.091 24 C -0.075 4.075 25 C -0.076 4.076 26 C -0.148 4.148 27 H 0.067 0.933 28 H 0.068 0.932 29 H 0.082 0.918 30 H 0.072 0.928 31 H 0.072 0.928 32 H 0.106 0.894 33 H 0.119 0.881 34 H 0.158 0.842 35 H 0.160 0.840 36 H 0.123 0.877 37 H 0.381 0.619 38 H -0.251 1.251 39 H -0.247 1.247 40 H 0.151 0.849 41 H 0.156 0.844 42 H 0.155 0.845 43 H 0.128 0.872 44 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.510 -0.399 0.379 3.553 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.315 3.685 5 O -0.374 6.374 6 C -0.131 4.131 7 H 0.149 0.851 8 C -0.159 4.159 9 C 0.079 3.921 10 F -0.146 7.146 11 C -0.802 4.802 12 S 2.681 3.319 13 O -0.908 6.908 14 O -0.928 6.928 15 O -0.614 6.614 16 C 0.050 3.950 17 C -0.176 4.176 18 Br 0.076 6.924 19 C -0.078 4.078 20 C -0.189 4.189 21 O -0.330 6.330 22 Si 0.591 3.409 23 C -0.110 4.110 24 C -0.093 4.093 25 C -0.097 4.097 26 C -0.186 4.186 27 H 0.086 0.914 28 H 0.087 0.913 29 H 0.101 0.899 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.125 0.875 33 H 0.137 0.863 34 H 0.176 0.824 35 H 0.178 0.822 36 H 0.141 0.859 37 H 0.228 0.772 38 H -0.176 1.176 39 H -0.171 1.171 40 H 0.169 0.831 41 H 0.174 0.826 42 H 0.173 0.827 43 H 0.147 0.853 44 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 3.889 0.526 0.498 3.956 hybrid contribution -0.407 0.262 0.347 0.595 sum 3.482 0.788 0.845 3.669 Atomic orbital electron populations 1.21825 0.92256 1.03297 1.03689 1.23116 0.95614 0.79609 1.02913 1.86476 1.23884 1.32968 1.83837 1.22853 0.81026 0.91571 0.73026 1.90714 1.60367 1.42461 1.43831 1.21980 0.97658 0.92238 1.01209 0.85148 1.23514 0.93474 1.06330 0.92561 1.21455 0.95194 0.79353 0.96107 1.93037 1.97116 1.37776 1.86624 1.32136 1.10318 1.09621 1.28097 1.05871 0.74714 0.74023 0.77305 1.93674 1.40524 1.74600 1.81981 1.93686 1.82345 1.42938 1.73826 1.85794 1.27427 1.62972 1.85197 1.17728 0.81817 0.99761 0.95729 1.22055 0.97363 1.04308 0.93916 1.96785 1.87923 1.73085 1.34566 1.20295 0.92901 0.97131 0.97466 1.25309 1.06925 0.98814 0.87877 1.86597 1.90038 1.20439 1.35938 0.94871 0.73934 0.90753 0.81320 1.21298 1.00292 0.97200 0.92231 1.21315 0.91943 0.97021 0.99028 1.21464 0.97327 0.94100 0.96833 1.23860 0.95410 1.03268 0.96057 0.91373 0.91293 0.89943 0.90915 0.91005 0.87546 0.86251 0.82436 0.82174 0.85945 0.77156 1.17558 1.17127 0.83149 0.82606 0.82690 0.85336 0.88053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 10.29 37.16 0.38 0.52 16 2 C 0.06 0.07 6.19 37.16 0.23 0.30 16 3 O -0.35 -0.91 10.22 -39.24 -0.40 -1.31 16 4 C 0.47 1.44 6.93 36.01 0.25 1.69 16 5 O -0.49 -2.82 14.48 -18.75 -0.27 -3.09 16 6 C -0.11 0.03 4.45 -90.96 -0.40 -0.37 16 7 H 0.13 -0.41 8.14 -51.93 -0.42 -0.83 16 8 C -0.12 0.09 6.93 -25.92 -0.18 -0.09 16 9 C 0.10 0.13 1.56 -89.77 -0.14 -0.01 16 10 F -0.17 -0.81 14.83 2.25 0.03 -0.77 16 11 C -0.68 -0.18 3.48 37.16 0.13 -0.05 16 12 S 2.59 8.37 4.92 -107.50 -0.53 7.85 16 13 O -0.91 -4.93 17.96 -67.04 -1.20 -6.14 16 14 O -0.93 -4.79 15.82 -67.03 -1.06 -5.85 16 15 O -0.66 -1.60 9.50 -51.82 -0.49 -2.09 16 16 C 0.09 0.13 4.80 -39.20 -0.19 -0.06 16 17 C -0.09 -0.03 5.55 -39.38 -0.22 -0.25 16 18 Br -0.01 0.00 25.77 -68.01 -1.75 -1.75 16 19 C -0.08 0.12 5.26 -104.62 -0.55 -0.43 16 20 C -0.08 0.16 2.02 36.01 0.07 0.24 16 21 O -0.52 1.04 12.68 -35.23 -0.45 0.59 16 22 Si 0.69 -2.24 29.91 -169.99 -5.08 -7.32 16 23 C -0.09 0.32 8.66 -39.56 -0.34 -0.03 16 24 C -0.07 0.23 10.04 -39.60 -0.40 -0.17 16 25 C -0.08 0.03 9.05 -39.44 -0.36 -0.33 16 26 C -0.15 0.02 6.94 -25.89 -0.18 -0.16 16 27 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 28 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 29 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 30 H 0.07 0.11 8.13 -51.93 -0.42 -0.31 16 31 H 0.07 0.07 8.13 -51.93 -0.42 -0.36 16 32 H 0.11 0.07 7.43 -51.93 -0.39 -0.32 16 33 H 0.12 -0.44 8.10 -51.93 -0.42 -0.86 16 34 H 0.16 -0.08 5.34 -51.92 -0.28 -0.36 16 35 H 0.16 -0.38 6.68 -51.93 -0.35 -0.73 16 36 H 0.12 -0.15 7.24 -51.93 -0.38 -0.53 16 37 H 0.38 -2.19 8.70 45.56 0.40 -1.79 16 38 H -0.25 0.24 7.11 56.52 0.40 0.64 16 39 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 40 H 0.15 -1.00 5.12 -52.49 -0.27 -1.27 16 41 H 0.16 -0.96 8.06 -52.49 -0.42 -1.38 16 42 H 0.16 -0.24 8.06 -52.48 -0.42 -0.66 16 43 H 0.13 -0.39 8.04 -51.93 -0.42 -0.81 16 44 H 0.10 0.07 8.10 -51.93 -0.42 -0.35 16 LS Contribution 392.14 15.07 5.91 5.91 Total: 0.00 -12.04 392.14 -12.29 -24.32 By element: Atomic # 1 Polarization: -6.06 SS G_CDS: -5.10 Total: -11.15 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: -1.89 Total: 0.80 kcal Atomic # 8 Polarization: -14.00 SS G_CDS: -3.88 Total: -17.88 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 0.03 Total: -0.77 kcal Atomic # 14 Polarization: -2.24 SS G_CDS: -5.08 Total: -7.32 kcal Atomic # 16 Polarization: 8.37 SS G_CDS: -0.53 Total: 7.85 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -1.75 Total: -1.75 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -12.04 -12.29 -24.32 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10910594_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.761 kcal (2) G-P(sol) polarization free energy of solvation -12.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.796 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.289 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.324 kcal (6) G-S(sol) free energy of system = (1) + (5) -176.085 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds