Wall clock time and date at job start Mon Mar 8 2021 09:28:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45194 * 109.47456 * 2 1 4 4 C 1.34235 * 117.00489 * 180.02562 * 3 2 1 5 5 O 1.20828 * 119.99511 * 359.97438 * 4 3 2 6 6 C 1.50689 * 120.00223 * 180.02562 * 4 3 2 7 7 H 1.09002 * 109.47683 * 59.99621 * 6 4 3 8 8 C 1.52999 * 109.47395 * 179.97438 * 6 4 3 9 9 C 1.52997 * 109.47592 * 179.97438 * 8 6 4 10 10 C 1.52997 * 109.47232 * 300.00195 * 9 8 6 11 11 F 1.39897 * 109.47422 * 179.97438 * 10 9 8 12 12 C 1.53006 * 109.47127 * 300.00122 * 10 9 8 13 13 S 1.81400 * 109.47145 * 180.02562 * 12 10 9 14 14 O 1.42109 * 110.54012 * 291.61993 * 13 12 10 15 15 O 1.42095 * 110.54467 * 68.37106 * 13 12 10 16 16 O 1.52198 * 104.44877 * 179.97438 * 13 12 10 17 17 C 1.35919 * 114.00075 * 74.99853 * 16 13 12 18 18 C 1.38788 * 120.05851 * 90.00051 * 17 16 13 19 19 Br 1.89098 * 120.03909 * 0.02562 * 18 17 16 20 20 C 1.38241 * 119.92465 * 179.97438 * 18 17 16 21 21 C 1.50698 * 119.97187 * 180.02562 * 20 18 17 22 22 O 1.42899 * 109.47331 * 75.00280 * 21 20 18 23 23 Si 1.86304 * 109.46865 * 195.00115 * 21 20 18 24 24 C 1.38239 * 120.04529 * 0.02562 * 20 18 17 25 25 C 1.38279 * 120.12074 * 359.97320 * 24 20 18 26 26 C 1.38149 * 120.07044 * 359.76956 * 25 24 20 27 27 C 1.52999 * 109.47317 * 59.99633 * 10 9 8 28 28 C 1.52997 * 109.47269 * 300.00344 * 27 10 9 29 29 H 1.09002 * 109.47319 * 300.00114 * 1 2 3 30 30 H 1.08999 * 109.46933 * 59.99807 * 1 2 3 31 31 H 1.08996 * 109.47086 * 180.02562 * 1 2 3 32 32 H 1.09002 * 109.47319 * 239.99886 * 2 1 3 33 33 H 1.09004 * 109.47369 * 120.00047 * 2 1 3 34 34 H 1.09002 * 109.46719 * 59.99946 * 8 6 4 35 35 H 1.09000 * 109.47160 * 300.00226 * 8 6 4 36 36 H 1.09001 * 109.47375 * 180.02562 * 9 8 6 37 37 H 1.09002 * 109.47045 * 60.00253 * 9 8 6 38 38 H 1.09001 * 109.47002 * 299.99574 * 12 10 9 39 39 H 1.08993 * 109.46955 * 60.00011 * 12 10 9 40 40 H 1.08997 * 109.47666 * 314.99791 * 21 20 18 41 41 H 0.96703 * 113.99691 * 179.97438 * 22 21 20 42 42 H 1.48503 * 110.00005 * 300.00116 * 23 21 20 43 43 H 1.48502 * 110.00153 * 61.31687 * 23 21 20 44 44 H 1.08000 * 119.93869 * 179.97438 * 24 20 18 45 45 H 1.07999 * 119.96373 * 180.02562 * 25 24 20 46 46 H 1.07997 * 120.02172 * 180.24983 * 26 25 24 47 47 H 1.09002 * 109.46716 * 60.00091 * 27 10 9 48 48 H 1.09000 * 109.47486 * 180.02562 * 27 10 9 49 49 H 1.09002 * 109.47497 * 299.99829 * 28 27 10 50 50 H 1.09001 * 109.47375 * 179.97438 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5865 -0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.5853 3.4690 0.8904 8 6 5.4487 2.8572 -0.0001 9 6 6.0335 4.2710 -0.0002 10 6 5.5619 5.0180 -1.2494 11 9 6.0962 6.3109 -1.2492 12 6 6.0332 4.2710 -2.4987 13 16 5.4747 5.1570 -3.9798 14 8 4.0612 5.0792 -4.1040 15 8 6.1537 6.3991 -4.1036 16 8 6.0003 4.3251 -5.1408 17 6 5.3079 3.1754 -5.3553 18 6 4.2186 3.1700 -6.2153 19 35 3.6961 4.7624 -7.0911 20 6 3.5166 1.9990 -6.4318 21 6 2.3340 1.9918 -7.3658 22 8 2.7944 2.0413 -8.7177 23 14 1.3448 0.4351 -7.1033 24 6 3.8987 0.8346 -5.7920 25 6 4.9837 0.8378 -4.9348 26 6 5.6919 2.0041 -4.7190 27 6 4.0340 5.0981 -1.2493 28 6 3.4491 3.6843 -1.2492 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 1.8933 -0.5139 -0.8900 33 1 1.8934 -0.5138 0.8900 34 1 5.7845 2.3255 -0.8904 35 1 5.7847 2.3247 0.8896 36 1 7.1220 4.2140 -0.0008 37 1 5.6977 4.8032 0.8898 38 1 7.1217 4.2139 -2.4989 39 1 5.6165 3.2638 -2.4986 40 1 1.7061 2.8596 -7.1638 41 1 2.0851 2.0393 -9.3750 42 1 2.1896 -0.7555 -7.3755 43 1 0.8335 0.3870 -5.7099 44 1 3.3487 -0.0792 -5.9621 45 1 5.2802 -0.0734 -4.4367 46 1 6.5417 2.0048 -4.0525 47 1 3.6982 5.6302 -0.3592 48 1 3.6979 5.6299 -2.1395 49 1 3.7849 3.1521 -2.1392 50 1 2.3606 3.7414 -1.2487 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10910594_16464696.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:28:45 Heat of formation + Delta-G solvation = -220.910724 kcal Electronic energy + Delta-G solvation = -42382.158915 eV Core-core repulsion = 36851.663109 eV Total energy + Delta-G solvation = -5530.495806 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 481.043 amu Computer time = 2.96 seconds Orbital eigenvalues (eV) -49.07119 -42.52779 -41.89927 -40.03447 -39.75253 -38.34964 -37.66827 -37.63089 -37.23969 -33.96046 -33.61636 -32.69777 -32.55338 -32.27579 -30.50795 -29.43301 -27.19155 -25.51565 -24.96949 -24.35970 -23.77660 -23.23298 -21.97353 -21.68887 -20.62269 -19.53495 -19.06401 -18.84209 -18.73817 -18.57154 -18.10382 -17.87311 -17.71453 -17.48142 -17.30395 -16.77164 -16.48680 -16.09597 -15.83548 -15.54235 -15.48731 -15.15289 -15.07765 -15.02429 -14.73995 -14.60214 -14.41601 -14.29313 -14.16558 -14.16195 -13.90807 -13.81316 -13.73327 -13.48832 -13.27743 -13.22232 -13.14028 -12.98770 -12.95259 -12.90693 -12.85597 -12.64047 -12.47536 -12.41119 -12.14495 -12.05901 -11.92544 -11.78256 -11.61163 -11.42791 -11.33204 -11.22610 -10.50438 -10.40667 -10.02497 -5.16103 -1.33115 -0.45623 -0.41392 0.34444 0.79430 1.05721 1.06262 1.46188 1.49767 1.73492 1.85775 2.29655 2.62023 2.73163 2.91442 2.95242 2.99480 3.22425 3.24482 3.32089 3.37879 3.46897 3.50443 3.61078 3.68706 3.74392 3.78504 3.83696 3.85083 3.89463 3.94373 3.97902 4.01266 4.06119 4.18268 4.23292 4.35202 4.40826 4.42942 4.45487 4.57679 4.64682 4.66298 4.69716 4.70863 4.71768 4.77633 4.79552 4.88652 4.93292 4.98170 5.16081 5.35815 6.48236 6.61786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.467 3.533 5 O -0.505 6.505 6 C -0.088 4.088 7 H 0.119 0.881 8 C -0.107 4.107 9 C -0.129 4.129 10 C 0.140 3.860 11 F -0.190 7.190 12 C -0.696 4.696 13 S 2.587 3.413 14 O -0.928 6.928 15 O -0.900 6.900 16 O -0.654 6.654 17 C 0.091 3.909 18 C -0.044 4.044 19 Br 0.005 6.995 20 C -0.029 4.029 21 C -0.086 4.086 22 O -0.535 6.535 23 Si 0.693 3.307 24 C -0.100 4.100 25 C -0.080 4.080 26 C -0.123 4.123 27 C -0.170 4.170 28 C -0.107 4.107 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.078 0.922 35 H 0.088 0.912 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.156 0.844 39 H 0.154 0.846 40 H 0.087 0.913 41 H 0.387 0.613 42 H -0.245 1.245 43 H -0.249 1.249 44 H 0.142 0.858 45 H 0.153 0.847 46 H 0.153 0.847 47 H 0.102 0.898 48 H 0.101 0.899 49 H 0.070 0.930 50 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.292 -6.093 1.509 8.210 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.012 4.012 3 O -0.271 6.271 4 C 0.309 3.691 5 O -0.393 6.393 6 C -0.107 4.107 7 H 0.137 0.863 8 C -0.144 4.144 9 C -0.167 4.167 10 C 0.121 3.879 11 F -0.170 7.170 12 C -0.820 4.820 13 S 2.680 3.320 14 O -0.926 6.926 15 O -0.898 6.898 16 O -0.612 6.612 17 C 0.047 3.953 18 C -0.127 4.127 19 Br 0.092 6.908 20 C -0.031 4.031 21 C -0.196 4.196 22 O -0.341 6.341 23 Si 0.593 3.407 24 C -0.119 4.119 25 C -0.098 4.098 26 C -0.144 4.144 27 C -0.207 4.207 28 C -0.144 4.144 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.100 0.900 32 H 0.088 0.912 33 H 0.090 0.910 34 H 0.096 0.904 35 H 0.107 0.893 36 H 0.109 0.891 37 H 0.110 0.890 38 H 0.174 0.826 39 H 0.172 0.828 40 H 0.105 0.895 41 H 0.235 0.765 42 H -0.170 1.170 43 H -0.173 1.173 44 H 0.160 0.840 45 H 0.171 0.829 46 H 0.171 0.829 47 H 0.121 0.879 48 H 0.119 0.881 49 H 0.089 0.911 50 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -4.889 -5.922 1.406 7.807 hybrid contribution 1.137 -0.315 0.890 1.478 sum -3.752 -6.237 2.297 7.632 Atomic orbital electron populations 1.21828 0.92224 1.03317 1.03782 1.23094 0.95711 0.79750 1.02688 1.86513 1.24200 1.32809 1.83616 1.23606 0.80837 0.92370 0.72275 1.90685 1.60472 1.43019 1.45078 1.21250 0.96580 0.90326 1.02509 0.86321 1.21509 0.91754 0.96300 1.04857 1.22073 1.02646 0.95655 0.96339 1.20437 0.94277 0.78836 0.94365 1.93007 1.87770 1.38846 1.97396 1.31713 1.15118 1.16135 1.19071 1.05986 0.75258 0.75493 0.75286 1.93705 1.29986 1.85778 1.83181 1.93700 1.75204 1.37338 1.83530 1.85793 1.67756 1.41062 1.66616 1.17691 0.92573 0.83384 1.01687 1.21998 0.96677 0.95255 0.98761 1.96842 1.90577 1.27265 1.76158 1.19252 0.95688 0.91271 0.96926 1.24833 0.97384 1.12556 0.84840 1.86508 1.36832 1.97706 1.13103 0.94730 0.84848 0.75830 0.85301 1.21304 0.97134 0.97270 0.96201 1.21154 0.93843 0.98046 0.96750 1.21437 1.01033 0.90932 1.00952 1.22610 0.91756 0.99283 1.07075 1.21506 1.03066 0.93931 0.95916 0.91253 0.91306 0.89975 0.91206 0.91033 0.90383 0.89305 0.89124 0.88996 0.82635 0.82830 0.89500 0.76520 1.17016 1.17289 0.84030 0.82949 0.82906 0.87901 0.88083 0.91122 0.88324 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.37 10.29 37.16 0.38 0.75 16 2 C 0.06 -0.04 6.19 37.16 0.23 0.19 16 3 O -0.35 -0.16 10.12 -39.27 -0.40 -0.55 16 4 C 0.47 0.24 7.25 36.00 0.26 0.50 16 5 O -0.51 -1.45 15.73 -18.75 -0.29 -1.74 16 6 C -0.09 0.17 2.63 -91.77 -0.24 -0.07 16 7 H 0.12 -0.43 8.14 -51.93 -0.42 -0.85 16 8 C -0.11 0.25 4.22 -26.73 -0.11 0.14 16 9 C -0.13 0.31 5.19 -26.73 -0.14 0.17 16 10 C 0.14 -0.05 1.10 -90.62 -0.10 -0.15 16 11 F -0.19 -0.49 16.08 2.25 0.04 -0.45 16 12 C -0.70 0.61 4.06 37.16 0.15 0.76 16 13 S 2.59 8.21 4.44 -107.50 -0.48 7.73 16 14 O -0.93 -3.26 12.56 -67.03 -0.84 -4.10 16 15 O -0.90 -6.26 17.60 -67.04 -1.18 -7.44 16 16 O -0.65 -2.15 9.41 -51.81 -0.49 -2.63 16 17 C 0.09 0.21 4.79 -39.20 -0.19 0.02 16 18 C -0.04 -0.14 5.58 -39.38 -0.22 -0.36 16 19 Br 0.00 0.02 29.92 -68.01 -2.03 -2.02 16 20 C -0.03 -0.04 5.29 -104.62 -0.55 -0.60 16 21 C -0.09 0.05 2.01 36.00 0.07 0.12 16 22 O -0.53 0.32 12.67 -35.23 -0.45 -0.12 16 23 Si 0.69 -1.82 30.19 -169.99 -5.13 -6.96 16 24 C -0.10 0.01 8.66 -39.57 -0.34 -0.33 16 25 C -0.08 0.12 10.04 -39.60 -0.40 -0.28 16 26 C -0.12 0.10 8.47 -39.44 -0.33 -0.23 16 27 C -0.17 0.16 4.71 -26.73 -0.13 0.04 16 28 C -0.11 0.18 4.86 -26.73 -0.13 0.05 16 29 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 31 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 32 H 0.07 -0.06 8.13 -51.93 -0.42 -0.48 16 33 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 34 H 0.08 -0.19 6.38 -51.93 -0.33 -0.53 16 35 H 0.09 -0.19 8.10 -51.93 -0.42 -0.62 16 36 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 37 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 38 H 0.16 -0.49 8.14 -51.92 -0.42 -0.91 16 39 H 0.15 -0.47 3.29 -51.93 -0.17 -0.64 16 40 H 0.09 -0.11 7.22 -51.93 -0.38 -0.48 16 41 H 0.39 -2.14 8.74 45.56 0.40 -1.74 16 42 H -0.25 0.13 6.75 56.52 0.38 0.51 16 43 H -0.25 0.13 7.11 56.52 0.40 0.53 16 44 H 0.14 -0.20 4.89 -52.49 -0.26 -0.46 16 45 H 0.15 -0.66 8.06 -52.49 -0.42 -1.09 16 46 H 0.15 -0.62 7.52 -52.49 -0.39 -1.01 16 47 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 48 H 0.10 0.02 5.46 -51.93 -0.28 -0.26 16 49 H 0.07 -0.12 6.43 -51.93 -0.33 -0.45 16 50 H 0.10 -0.20 8.11 -51.93 -0.42 -0.62 16 LS Contribution 423.53 15.07 6.38 6.38 Total: 0.00 -11.62 423.53 -13.12 -24.74 By element: Atomic # 1 Polarization: -7.08 SS G_CDS: -6.46 Total: -13.54 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: -1.79 Total: 0.71 kcal Atomic # 8 Polarization: -12.95 SS G_CDS: -3.65 Total: -16.60 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: -5.13 Total: -6.96 kcal Atomic # 16 Polarization: 8.21 SS G_CDS: -0.48 Total: 7.73 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.03 Total: -2.02 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -11.62 -13.12 -24.74 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10910594_16464696.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -196.175 kcal (2) G-P(sol) polarization free energy of solvation -11.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -207.792 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.119 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.736 kcal (6) G-S(sol) free energy of system = (1) + (5) -220.911 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.96 seconds