Wall clock time and date at job start Mon Mar 8 2021 09:28:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45198 * 109.46982 * 2 1 4 4 C 1.34230 * 116.99776 * 179.97438 * 3 2 1 5 5 O 1.20831 * 120.00246 * 0.02562 * 4 3 2 6 6 C 1.50706 * 120.00139 * 179.97438 * 4 3 2 7 7 H 1.08993 * 109.46700 * 60.00121 * 6 4 3 8 8 C 1.52999 * 109.46957 * 180.02562 * 6 4 3 9 9 C 1.53006 * 109.46626 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.47127 * 299.99539 * 9 8 6 11 11 F 1.39901 * 109.47234 * 300.00554 * 10 9 8 12 12 C 1.52996 * 109.47131 * 179.97438 * 10 9 8 13 13 S 1.81397 * 109.47138 * 184.99977 * 12 10 9 14 14 O 1.42094 * 110.54488 * 291.62640 * 13 12 10 15 15 O 1.42100 * 110.54107 * 68.37863 * 13 12 10 16 16 O 1.52208 * 104.44961 * 180.02562 * 13 12 10 17 17 C 1.35921 * 113.99963 * 75.00125 * 16 13 12 18 18 C 1.38793 * 120.05444 * 269.72528 * 17 16 13 19 19 Br 1.89093 * 120.03995 * 0.02562 * 18 17 16 20 20 C 1.38238 * 119.92152 * 179.81350 * 18 17 16 21 21 C 1.50700 * 119.97704 * 180.18328 * 20 18 17 22 22 O 1.42896 * 109.47176 * 285.25829 * 21 20 18 23 23 Si 1.86294 * 109.47223 * 165.25501 * 21 20 18 24 24 C 1.38243 * 120.04606 * 0.44368 * 20 18 17 25 25 C 1.38278 * 120.11928 * 359.78531 * 24 20 18 26 26 C 1.38143 * 120.07085 * 0.02562 * 25 24 20 27 27 C 1.53002 * 109.46817 * 60.00361 * 10 9 8 28 28 C 1.52996 * 109.46972 * 299.99733 * 27 10 9 29 29 H 1.09003 * 109.47564 * 300.00666 * 1 2 3 30 30 H 1.09011 * 109.46967 * 60.00126 * 1 2 3 31 31 H 1.08999 * 109.47198 * 179.97438 * 1 2 3 32 32 H 1.08994 * 109.47422 * 239.99964 * 2 1 3 33 33 H 1.08998 * 109.46694 * 119.99955 * 2 1 3 34 34 H 1.08993 * 109.47839 * 60.00178 * 8 6 4 35 35 H 1.09000 * 109.47160 * 299.99740 * 8 6 4 36 36 H 1.09001 * 109.46801 * 59.99811 * 9 8 6 37 37 H 1.09001 * 109.46998 * 179.97438 * 9 8 6 38 38 H 1.08997 * 109.47395 * 305.00575 * 12 10 9 39 39 H 1.09008 * 109.47057 * 65.00401 * 12 10 9 40 40 H 1.09005 * 109.46863 * 45.25539 * 21 20 18 41 41 H 0.96702 * 114.00075 * 299.99716 * 22 21 20 42 42 H 1.48496 * 110.00326 * 58.68390 * 23 21 20 43 43 H 1.48503 * 110.00182 * 180.02562 * 23 21 20 44 44 H 1.08002 * 119.94183 * 179.77227 * 24 20 18 45 45 H 1.08001 * 119.96704 * 179.97438 * 25 24 20 46 46 H 1.08008 * 120.02143 * 179.97438 * 26 25 24 47 47 H 1.08996 * 109.47407 * 60.00219 * 27 10 9 48 48 H 1.09000 * 109.46986 * 179.97438 * 27 10 9 49 49 H 1.09001 * 109.46993 * 180.02562 * 28 27 10 50 50 H 1.09000 * 109.47380 * 299.99696 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.5844 3.4700 0.8895 8 6 5.4487 2.8572 0.0001 9 6 6.0335 4.2711 0.0002 10 6 5.5621 5.0181 -1.2491 11 9 5.9934 4.3350 -2.3913 12 6 6.1463 6.4321 -1.2487 13 16 5.4712 7.3657 -2.6498 14 8 5.9591 6.8440 -3.8781 15 8 4.0857 7.6177 -2.4597 16 8 6.1212 8.7376 -2.5406 17 6 7.4243 8.7642 -2.9264 18 6 8.4292 8.5336 -1.9973 19 35 7.9874 8.1812 -0.1928 20 6 9.7534 8.5575 -2.3936 21 6 10.8454 8.3032 -1.3866 22 8 11.0019 9.4532 -0.5530 23 14 12.4447 7.9602 -2.2783 24 6 10.0768 8.8199 -3.7118 25 6 9.0772 9.0546 -4.6380 26 6 7.7522 9.0281 -4.2482 27 6 4.0342 5.0981 -1.2492 28 6 3.4494 3.6843 -1.2493 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8901 31 1 -0.3633 -1.0276 -0.0005 32 1 1.8934 -0.5138 -0.8899 33 1 1.8933 -0.5138 0.8900 34 1 5.7847 2.3248 -0.8895 35 1 5.7845 2.3255 0.8904 36 1 5.6974 4.8032 0.8902 37 1 7.1220 4.2141 0.0008 38 1 5.8834 6.9336 -0.3173 39 1 7.2314 6.3769 -1.3379 40 1 10.5800 7.4426 -0.7725 41 1 11.2389 10.2581 -1.0337 42 1 12.8012 9.1130 -3.1437 43 1 13.5296 7.7071 -1.2963 44 1 11.1120 8.8418 -4.0188 45 1 9.3327 9.2598 -5.6671 46 1 6.9721 9.2119 -4.9722 47 1 3.6981 5.6303 -0.3594 48 1 3.6984 5.6307 -2.1390 49 1 2.3609 3.7414 -1.2499 50 1 3.7854 3.1522 -2.1393 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10910594_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:28:51 Heat of formation + Delta-G solvation = -217.805757 kcal Electronic energy + Delta-G solvation = -40830.260585 eV Core-core repulsion = 35299.899420 eV Total energy + Delta-G solvation = -5530.361165 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 481.043 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -49.00242 -42.56715 -41.63732 -40.16002 -39.12713 -38.39251 -37.78461 -37.50296 -37.29751 -34.60871 -33.79142 -32.69076 -32.53552 -32.16230 -30.75122 -29.12610 -27.28879 -25.17034 -24.91653 -24.24683 -23.56605 -23.40329 -21.97115 -21.51922 -20.89812 -19.68991 -19.16492 -18.87868 -18.66934 -18.23292 -17.88236 -17.69813 -17.58891 -17.18131 -17.14398 -16.76721 -16.51675 -16.39133 -16.25899 -15.77331 -15.31946 -15.29556 -14.98923 -14.94446 -14.63570 -14.55802 -14.48518 -14.37193 -14.21594 -13.84491 -13.81027 -13.57114 -13.56497 -13.40250 -13.29006 -13.25812 -13.22432 -13.20185 -13.06076 -12.86712 -12.85187 -12.52837 -12.44025 -12.31058 -11.99580 -11.96699 -11.84623 -11.78228 -11.47791 -11.35705 -11.15087 -11.09449 -10.90029 -10.39965 -10.15460 -5.16189 -1.33250 -0.52664 -0.36882 0.01402 0.75123 1.00751 1.22920 1.34721 1.65032 1.76033 1.90545 2.27229 2.63687 2.78194 2.90713 3.02104 3.15922 3.18124 3.27557 3.42716 3.45359 3.50384 3.51039 3.65132 3.73317 3.78718 3.91928 3.96162 3.98057 4.00096 4.01842 4.06754 4.17236 4.20645 4.25565 4.31401 4.42033 4.46942 4.48243 4.52470 4.68766 4.72516 4.72912 4.75871 4.82455 4.82822 4.87331 4.92003 5.02993 5.04571 5.18472 5.20030 5.50860 6.16657 6.78686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.467 3.533 5 O -0.504 6.504 6 C -0.083 4.083 7 H 0.114 0.886 8 C -0.109 4.109 9 C -0.127 4.127 10 C 0.140 3.860 11 F -0.188 7.188 12 C -0.690 4.690 13 S 2.589 3.411 14 O -0.930 6.930 15 O -0.911 6.911 16 O -0.655 6.655 17 C 0.093 3.907 18 C -0.093 4.093 19 Br -0.009 7.009 20 C -0.073 4.073 21 C -0.086 4.086 22 O -0.513 6.513 23 Si 0.697 3.303 24 C -0.100 4.100 25 C -0.075 4.075 26 C -0.076 4.076 27 C -0.171 4.171 28 C -0.110 4.110 29 H 0.067 0.933 30 H 0.068 0.932 31 H 0.081 0.919 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.084 0.916 35 H 0.085 0.915 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.160 0.840 39 H 0.154 0.846 40 H 0.127 0.873 41 H 0.377 0.623 42 H -0.253 1.253 43 H -0.249 1.249 44 H 0.151 0.849 45 H 0.155 0.845 46 H 0.155 0.845 47 H 0.104 0.896 48 H 0.092 0.908 49 H 0.093 0.907 50 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.750 0.979 -0.671 2.995 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.309 3.691 5 O -0.391 6.391 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.146 4.146 9 C -0.166 4.166 10 C 0.120 3.880 11 F -0.168 7.168 12 C -0.816 4.816 13 S 2.683 3.317 14 O -0.928 6.928 15 O -0.909 6.909 16 O -0.614 6.614 17 C 0.049 3.951 18 C -0.175 4.175 19 Br 0.078 6.922 20 C -0.075 4.075 21 C -0.195 4.195 22 O -0.319 6.319 23 Si 0.596 3.404 24 C -0.119 4.119 25 C -0.093 4.093 26 C -0.097 4.097 27 C -0.209 4.209 28 C -0.148 4.148 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.100 0.900 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.103 0.897 35 H 0.103 0.897 36 H 0.108 0.892 37 H 0.109 0.891 38 H 0.178 0.822 39 H 0.172 0.828 40 H 0.145 0.855 41 H 0.225 0.775 42 H -0.178 1.178 43 H -0.173 1.173 44 H 0.168 0.832 45 H 0.172 0.828 46 H 0.173 0.827 47 H 0.122 0.878 48 H 0.111 0.889 49 H 0.112 0.888 50 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 2.948 0.664 -0.155 3.026 hybrid contribution -0.070 0.879 0.536 1.032 sum 2.878 1.543 0.381 3.288 Atomic orbital electron populations 1.21824 0.92315 1.03255 1.03682 1.23083 0.95606 0.79836 1.02750 1.86503 1.24319 1.32761 1.83769 1.23608 0.80737 0.92424 0.72294 1.90692 1.60453 1.43050 1.44880 1.21175 0.96723 0.90190 1.02088 0.86776 1.21483 0.91602 0.96396 1.05147 1.22080 1.02660 0.95777 0.96045 1.20475 0.94594 0.87493 0.85413 1.92972 1.91129 1.81038 1.51695 1.32316 1.15239 1.09995 1.24039 1.05859 0.75524 0.73720 0.76582 1.93691 1.80510 1.78722 1.39904 1.93676 1.28625 1.81850 1.86759 1.85774 1.30650 1.58096 1.86852 1.17723 0.77508 1.06597 0.93245 1.22059 0.94992 1.08579 0.91846 1.96800 1.92845 1.92810 1.09794 1.20201 0.92589 0.98988 0.95748 1.25254 1.04644 0.92795 0.96833 1.86704 1.91151 1.18953 1.35131 0.94736 0.75333 0.88551 0.81747 1.21491 1.01235 0.97437 0.91717 1.21297 0.90890 0.96156 1.00987 1.21463 0.98744 0.96223 0.93229 1.22696 0.92131 0.99542 1.06523 1.21489 1.02405 0.93949 0.96942 0.91375 0.91316 0.90024 0.91068 0.91130 0.89694 0.89679 0.89202 0.89126 0.82217 0.82819 0.85542 0.77542 1.17794 1.17348 0.83206 0.82754 0.82728 0.87757 0.88928 0.88835 0.90045 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.21 10.29 37.16 0.38 0.59 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.65 10.12 -39.26 -0.40 -1.05 16 4 C 0.47 1.06 7.26 36.01 0.26 1.32 16 5 O -0.50 -2.57 15.73 -18.75 -0.30 -2.86 16 6 C -0.08 0.04 2.63 -91.77 -0.24 -0.20 16 7 H 0.11 -0.29 8.14 -51.93 -0.42 -0.72 16 8 C -0.11 0.05 4.37 -26.73 -0.12 -0.07 16 9 C -0.13 0.24 5.00 -26.73 -0.13 0.11 16 10 C 0.14 -0.02 0.89 -90.62 -0.08 -0.10 16 11 F -0.19 -0.42 15.33 2.25 0.03 -0.39 16 12 C -0.69 0.38 3.16 37.16 0.12 0.50 16 13 S 2.59 6.23 4.41 -107.50 -0.47 5.75 16 14 O -0.93 -3.87 15.96 -67.04 -1.07 -4.94 16 15 O -0.91 -4.03 15.64 -67.03 -1.05 -5.08 16 16 O -0.66 -1.34 9.50 -51.82 -0.49 -1.83 16 17 C 0.09 0.10 4.79 -39.20 -0.19 -0.09 16 18 C -0.09 0.00 5.54 -39.38 -0.22 -0.22 16 19 Br -0.01 0.00 25.88 -68.01 -1.76 -1.76 16 20 C -0.07 0.12 5.26 -104.62 -0.55 -0.43 16 21 C -0.09 0.19 2.02 36.01 0.07 0.26 16 22 O -0.51 0.53 12.68 -35.23 -0.45 0.08 16 23 Si 0.70 -2.30 30.24 -169.99 -5.14 -7.44 16 24 C -0.10 0.32 8.66 -39.56 -0.34 -0.03 16 25 C -0.07 0.22 10.04 -39.60 -0.40 -0.17 16 26 C -0.08 0.04 9.05 -39.44 -0.36 -0.31 16 27 C -0.17 0.04 4.32 -26.73 -0.12 -0.08 16 28 C -0.11 0.03 5.01 -26.73 -0.13 -0.10 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 -0.09 8.14 -51.92 -0.42 -0.51 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 33 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 34 H 0.08 0.09 7.76 -51.93 -0.40 -0.31 16 35 H 0.08 -0.05 8.10 -51.93 -0.42 -0.47 16 36 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 37 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.16 -0.44 6.80 -51.93 -0.35 -0.79 16 39 H 0.15 -0.25 5.40 -51.92 -0.28 -0.53 16 40 H 0.13 -0.32 7.24 -51.93 -0.38 -0.69 16 41 H 0.38 -1.50 8.70 45.56 0.40 -1.10 16 42 H -0.25 0.60 6.68 56.52 0.38 0.97 16 43 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 44 H 0.15 -0.79 4.85 -52.49 -0.25 -1.05 16 45 H 0.15 -0.91 8.06 -52.49 -0.42 -1.33 16 46 H 0.16 -0.27 8.06 -52.48 -0.42 -0.69 16 47 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 48 H 0.09 0.10 5.39 -51.93 -0.28 -0.18 16 49 H 0.09 -0.10 8.11 -51.93 -0.42 -0.52 16 50 H 0.08 0.04 7.80 -51.93 -0.41 -0.36 16 LS Contribution 423.28 15.07 6.38 6.38 Total: 0.00 -10.63 423.28 -13.19 -23.82 By element: Atomic # 1 Polarization: -5.26 SS G_CDS: -6.67 Total: -11.93 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: -1.81 Total: 1.24 kcal Atomic # 8 Polarization: -11.93 SS G_CDS: -3.75 Total: -15.68 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.03 Total: -0.39 kcal Atomic # 14 Polarization: -2.30 SS G_CDS: -5.14 Total: -7.44 kcal Atomic # 16 Polarization: 6.23 SS G_CDS: -0.47 Total: 5.75 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -1.76 Total: -1.76 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -10.63 -13.19 -23.82 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10910594_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -193.990 kcal (2) G-P(sol) polarization free energy of solvation -10.625 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -204.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.191 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.816 kcal (6) G-S(sol) free energy of system = (1) + (5) -217.806 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds