Wall clock time and date at job start Mon Mar 8 2021 09:31:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45204 * 109.46527 * 2 1 4 4 C 1.34232 * 116.99679 * 179.97438 * 3 2 1 5 5 O 1.20824 * 119.99915 * 0.02562 * 4 3 2 6 6 C 1.50705 * 119.99562 * 179.97438 * 4 3 2 7 7 H 1.09000 * 112.84831 * 311.19610 * 6 4 3 8 8 C 1.53775 * 113.69061 * 82.47024 * 6 4 3 9 9 C 1.53775 * 87.08439 * 139.98660 * 8 6 4 10 10 F 1.39905 * 113.61386 * 89.11259 * 9 8 6 11 11 C 1.53000 * 113.69292 * 220.00591 * 9 8 6 12 12 S 1.81400 * 109.46971 * 284.06523 * 11 9 8 13 13 O 1.42103 * 110.54426 * 291.62355 * 12 11 9 14 14 O 1.42101 * 110.54602 * 68.37479 * 12 11 9 15 15 O 1.52198 * 104.44634 * 179.97438 * 12 11 9 16 16 C 1.35920 * 114.00064 * 75.00283 * 15 12 11 17 17 C 1.38791 * 120.05768 * 269.71768 * 16 15 12 18 18 Br 1.89104 * 120.03537 * 0.02562 * 17 16 15 19 19 C 1.38237 * 119.93253 * 179.76715 * 17 16 15 20 20 C 1.50693 * 119.98372 * 180.23228 * 19 17 16 21 21 O 1.42904 * 109.46937 * 75.25663 * 20 19 17 22 22 Si 1.86298 * 109.47592 * 195.25427 * 20 19 17 23 23 C 1.38250 * 120.03756 * 0.49004 * 19 17 16 24 24 C 1.38275 * 120.12030 * 359.78751 * 23 19 17 25 25 C 1.38146 * 120.07407 * 359.95824 * 24 23 19 26 26 C 1.53781 * 87.08212 * 334.56615 * 9 8 6 27 27 H 1.09005 * 109.47067 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.47571 * 299.99518 * 1 2 3 29 29 H 1.09003 * 109.47630 * 60.00455 * 1 2 3 30 30 H 1.08996 * 109.47069 * 240.00451 * 2 1 3 31 31 H 1.09000 * 109.47131 * 119.99581 * 2 1 3 32 32 H 1.09003 * 113.61436 * 25.43380 * 8 6 4 33 33 H 1.09002 * 113.61158 * 254.54033 * 8 6 4 34 34 H 1.09000 * 109.46911 * 44.06412 * 11 9 8 35 35 H 1.08997 * 109.46949 * 164.06469 * 11 9 8 36 36 H 1.09003 * 109.46934 * 315.26029 * 20 19 17 37 37 H 0.96698 * 114.00264 * 179.97438 * 21 20 19 38 38 H 1.48494 * 109.99929 * 178.68053 * 22 20 19 39 39 H 1.48500 * 110.00137 * 300.00682 * 22 20 19 40 40 H 1.08003 * 119.93438 * 179.76540 * 23 19 17 41 41 H 1.08009 * 119.96244 * 179.97438 * 24 23 19 42 42 H 1.07994 * 120.02013 * 180.02562 * 25 24 23 43 43 H 1.08999 * 113.61554 * 139.97516 * 26 9 8 44 44 H 1.09001 * 113.61623 * 270.88912 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5450 0.0005 5 8 4.0806 0.5868 0.0005 6 6 3.9205 2.9377 0.0000 7 1 3.4712 3.5812 -0.7564 8 6 3.9854 3.5800 1.3957 9 6 5.3557 4.1448 0.9858 10 9 5.2826 5.3944 0.3609 11 6 6.3986 4.1000 2.1044 12 16 6.0583 5.4196 3.3016 13 8 6.3008 6.6940 2.7215 14 8 4.8545 5.1536 4.0083 15 8 7.1500 5.2706 4.3515 16 6 8.3698 5.7136 3.9475 17 6 9.2533 4.8442 3.3231 18 35 8.7612 3.0416 3.0327 19 6 10.4914 5.2988 2.9089 20 6 11.4495 4.3571 2.2261 21 8 11.0179 4.1295 0.8830 22 14 13.1543 5.1083 2.2115 23 6 10.8531 6.6154 3.1254 24 6 9.9766 7.4817 3.7524 25 6 8.7361 7.0339 4.1636 26 6 5.4580 2.9684 0.0007 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5137 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 1.8933 -0.5137 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 4.0371 2.8550 2.2080 33 1 3.2281 4.3468 1.5590 34 1 6.3520 3.1334 2.6060 35 1 7.3926 4.2417 1.6802 36 1 11.4743 3.4101 2.7652 37 1 11.5893 3.5315 0.3822 38 1 14.1148 4.1756 1.5692 39 1 13.1338 6.4002 1.4795 40 1 11.8223 6.9678 2.8045 41 1 10.2620 8.5097 3.9207 42 1 8.0521 7.7114 4.6529 43 1 5.8896 3.2416 -0.9622 44 1 5.9123 2.0762 0.4316 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_10910594_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:31:53 Heat of formation + Delta-G solvation = -177.642167 kcal Electronic energy + Delta-G solvation = -36080.310887 eV Core-core repulsion = 30862.766584 eV Total energy + Delta-G solvation = -5217.544303 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -49.10638 -42.50661 -41.77682 -40.03059 -39.35800 -38.35286 -37.78916 -37.43743 -37.24716 -34.21589 -32.89756 -32.68219 -31.91150 -30.65882 -27.38826 -27.28088 -26.89815 -24.93181 -23.99940 -23.26933 -22.37940 -21.41604 -20.89055 -19.59562 -19.20188 -18.99039 -18.71000 -18.61456 -17.96122 -17.74856 -17.61457 -17.38839 -17.22900 -16.51206 -16.29832 -16.19257 -15.87256 -15.77559 -15.42392 -15.08051 -14.84533 -14.70199 -14.59190 -14.45589 -14.28059 -14.13167 -13.79932 -13.77720 -13.76574 -13.61018 -13.30639 -13.21029 -13.12066 -13.07733 -13.04243 -12.96918 -12.64478 -12.55315 -12.42605 -12.03632 -11.96048 -11.86956 -11.55195 -11.53253 -11.36525 -11.21098 -10.69328 -10.33673 -10.12573 -5.17299 -1.30173 -0.46986 -0.31668 0.03021 0.78777 1.01243 1.07892 1.38734 1.55862 1.72519 1.95858 2.31374 2.59803 2.65259 2.73769 2.84208 2.95790 3.11808 3.12983 3.27916 3.44707 3.48877 3.65684 3.71204 3.79894 3.82607 3.92773 3.93214 3.97866 4.01609 4.24558 4.26793 4.27663 4.29678 4.33437 4.46125 4.53974 4.55873 4.63253 4.70215 4.79078 4.79481 4.89007 4.96405 5.01141 5.25088 5.41776 6.20747 6.68323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.108 4.108 7 H 0.138 0.862 8 C -0.148 4.148 9 C 0.105 3.895 10 F -0.170 7.170 11 C -0.677 4.677 12 S 2.589 3.411 13 O -0.929 6.929 14 O -0.909 6.909 15 O -0.654 6.654 16 C 0.092 3.908 17 C -0.094 4.094 18 Br -0.012 7.012 19 C -0.026 4.026 20 C -0.088 4.088 21 O -0.525 6.525 22 Si 0.693 3.307 23 C -0.094 4.094 24 C -0.075 4.075 25 C -0.075 4.075 26 C -0.118 4.118 27 H 0.082 0.918 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.117 0.883 33 H 0.110 0.890 34 H 0.160 0.840 35 H 0.158 0.842 36 H 0.087 0.913 37 H 0.385 0.615 38 H -0.254 1.254 39 H -0.248 1.248 40 H 0.151 0.849 41 H 0.156 0.844 42 H 0.156 0.844 43 H 0.101 0.899 44 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.806 -0.441 0.999 4.929 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.390 6.390 6 C -0.127 4.127 7 H 0.156 0.844 8 C -0.186 4.186 9 C 0.085 3.915 10 F -0.150 7.150 11 C -0.802 4.802 12 S 2.682 3.318 13 O -0.928 6.928 14 O -0.907 6.907 15 O -0.612 6.612 16 C 0.048 3.952 17 C -0.175 4.175 18 Br 0.075 6.925 19 C -0.028 4.028 20 C -0.198 4.198 21 O -0.333 6.333 22 Si 0.593 3.407 23 C -0.113 4.113 24 C -0.094 4.094 25 C -0.096 4.096 26 C -0.157 4.157 27 H 0.100 0.900 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.135 0.865 33 H 0.128 0.872 34 H 0.178 0.822 35 H 0.176 0.824 36 H 0.105 0.895 37 H 0.234 0.766 38 H -0.179 1.179 39 H -0.172 1.172 40 H 0.168 0.832 41 H 0.173 0.827 42 H 0.173 0.827 43 H 0.120 0.880 44 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 4.622 -0.305 1.083 4.757 hybrid contribution -0.170 -1.142 -1.296 1.736 sum 4.453 -1.447 -0.212 4.687 Atomic orbital electron populations 1.21829 0.92204 1.03311 1.03783 1.23122 0.95738 0.79658 1.02803 1.86524 1.24031 1.32916 1.83506 1.23226 0.80874 0.91830 0.72259 1.90685 1.60547 1.42730 1.45068 1.22481 0.97248 0.92034 1.00986 0.84382 1.23827 0.96114 1.01987 0.96646 1.21186 0.95091 0.82226 0.92977 1.93005 1.96986 1.41602 1.83391 1.32107 1.10112 1.23070 1.14945 1.05832 0.74657 0.76329 0.74938 1.93688 1.83498 1.36910 1.78694 1.93675 1.41740 1.86052 1.69230 1.85785 1.29059 1.84893 1.61507 1.17681 0.82548 0.93076 1.01924 1.22043 0.97347 0.92528 1.05625 1.96785 1.90898 1.09714 1.95110 1.19073 0.92136 0.94578 0.96989 1.24932 1.06974 1.02166 0.85691 1.86589 1.53812 1.70389 1.22540 0.94870 0.74022 0.80528 0.91263 1.21440 1.00889 0.91695 0.97281 1.21285 0.91827 1.01003 0.95239 1.21453 0.97785 0.92686 0.97686 1.23548 0.93564 0.97722 1.00819 0.89954 0.91251 0.91305 0.91014 0.91006 0.86479 0.87154 0.82177 0.82380 0.89499 0.76628 1.17874 1.17241 0.83220 0.82650 0.82652 0.88003 0.86219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.21 10.29 37.16 0.38 0.59 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.35 -0.70 10.22 -39.26 -0.40 -1.10 16 4 C 0.48 1.04 7.49 36.01 0.27 1.31 16 5 O -0.50 -2.27 15.65 -18.75 -0.29 -2.56 16 6 C -0.11 -0.01 4.23 -90.96 -0.39 -0.39 16 7 H 0.14 -0.21 8.14 -51.93 -0.42 -0.63 16 8 C -0.15 -0.04 6.76 -25.92 -0.18 -0.21 16 9 C 0.11 0.10 1.56 -89.81 -0.14 -0.04 16 10 F -0.17 -0.49 16.58 2.25 0.04 -0.45 16 11 C -0.68 -0.55 3.49 37.16 0.13 -0.42 16 12 S 2.59 8.63 4.91 -107.50 -0.53 8.10 16 13 O -0.93 -4.78 15.86 -67.03 -1.06 -5.84 16 14 O -0.91 -4.91 17.85 -67.04 -1.20 -6.10 16 15 O -0.65 -1.68 9.49 -51.81 -0.49 -2.18 16 16 C 0.09 0.16 4.79 -39.20 -0.19 -0.03 16 17 C -0.09 -0.08 5.54 -39.38 -0.22 -0.30 16 18 Br -0.01 0.00 25.89 -68.01 -1.76 -1.76 16 19 C -0.03 0.01 5.29 -104.62 -0.55 -0.54 16 20 C -0.09 0.17 2.01 36.00 0.07 0.25 16 21 O -0.53 0.58 12.69 -35.23 -0.45 0.14 16 22 Si 0.69 -2.23 30.19 -169.99 -5.13 -7.36 16 23 C -0.09 0.19 8.66 -39.56 -0.34 -0.15 16 24 C -0.08 0.17 10.04 -39.60 -0.40 -0.23 16 25 C -0.08 0.00 9.05 -39.44 -0.36 -0.36 16 26 C -0.12 0.01 6.86 -25.92 -0.18 -0.16 16 27 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 31 H 0.07 0.03 8.13 -51.93 -0.42 -0.40 16 32 H 0.12 -0.08 8.02 -51.93 -0.42 -0.50 16 33 H 0.11 -0.04 8.14 -51.93 -0.42 -0.47 16 34 H 0.16 -0.19 6.74 -51.92 -0.35 -0.54 16 35 H 0.16 0.03 5.41 -51.93 -0.28 -0.25 16 36 H 0.09 -0.26 7.21 -51.93 -0.37 -0.64 16 37 H 0.38 -1.82 8.74 45.56 0.40 -1.42 16 38 H -0.25 0.25 7.11 56.52 0.40 0.65 16 39 H -0.25 0.23 6.74 56.52 0.38 0.61 16 40 H 0.15 -0.61 4.89 -52.48 -0.26 -0.87 16 41 H 0.16 -0.84 8.06 -52.48 -0.42 -1.26 16 42 H 0.16 -0.22 8.06 -52.49 -0.42 -0.64 16 43 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.12 -0.03 7.40 -51.93 -0.38 -0.41 16 LS Contribution 395.09 15.07 5.95 5.95 Total: 0.00 -10.65 395.09 -12.28 -22.93 By element: Atomic # 1 Polarization: -4.21 SS G_CDS: -5.11 Total: -9.32 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -1.85 Total: -0.43 kcal Atomic # 8 Polarization: -13.76 SS G_CDS: -3.89 Total: -17.65 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -2.23 SS G_CDS: -5.13 Total: -7.36 kcal Atomic # 16 Polarization: 8.63 SS G_CDS: -0.53 Total: 8.10 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -1.76 Total: -1.76 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -10.65 -12.28 -22.93 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10910594_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.712 kcal (2) G-P(sol) polarization free energy of solvation -10.646 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.930 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.642 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds