Wall clock time and date at job start Mon Mar 8 2021 09:31:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45204 * 109.46527 * 2 1 4 4 C 1.34232 * 116.99679 * 179.97438 * 3 2 1 5 5 O 1.20824 * 119.99915 * 0.02562 * 4 3 2 6 6 C 1.50705 * 119.99562 * 179.97438 * 4 3 2 7 7 H 1.09000 * 112.84831 * 311.19610 * 6 4 3 8 8 C 1.53775 * 113.69061 * 82.47024 * 6 4 3 9 9 C 1.53775 * 87.08439 * 139.98660 * 8 6 4 10 10 F 1.39905 * 113.61386 * 89.11259 * 9 8 6 11 11 C 1.53000 * 113.69292 * 220.00591 * 9 8 6 12 12 S 1.81400 * 109.46971 * 284.06523 * 11 9 8 13 13 O 1.42103 * 110.54426 * 291.62355 * 12 11 9 14 14 O 1.42101 * 110.54602 * 68.37479 * 12 11 9 15 15 O 1.52198 * 104.44634 * 179.97438 * 12 11 9 16 16 C 1.35920 * 114.00064 * 75.00283 * 15 12 11 17 17 C 1.38791 * 120.05768 * 269.71768 * 16 15 12 18 18 Br 1.89104 * 120.03537 * 0.02562 * 17 16 15 19 19 C 1.38237 * 119.93253 * 179.76715 * 17 16 15 20 20 C 1.50693 * 119.98372 * 180.23228 * 19 17 16 21 21 O 1.42904 * 109.46937 * 75.25663 * 20 19 17 22 22 Si 1.86298 * 109.47592 * 195.25427 * 20 19 17 23 23 C 1.38250 * 120.03756 * 0.49004 * 19 17 16 24 24 C 1.38275 * 120.12030 * 359.78751 * 23 19 17 25 25 C 1.38146 * 120.07407 * 359.95824 * 24 23 19 26 26 C 1.53781 * 87.08212 * 334.56615 * 9 8 6 27 27 H 1.09005 * 109.47067 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.47571 * 299.99518 * 1 2 3 29 29 H 1.09003 * 109.47630 * 60.00455 * 1 2 3 30 30 H 1.08996 * 109.47069 * 240.00451 * 2 1 3 31 31 H 1.09000 * 109.47131 * 119.99581 * 2 1 3 32 32 H 1.09003 * 113.61436 * 25.43380 * 8 6 4 33 33 H 1.09002 * 113.61158 * 254.54033 * 8 6 4 34 34 H 1.09000 * 109.46911 * 44.06412 * 11 9 8 35 35 H 1.08997 * 109.46949 * 164.06469 * 11 9 8 36 36 H 1.09003 * 109.46934 * 315.26029 * 20 19 17 37 37 H 0.96698 * 114.00264 * 179.97438 * 21 20 19 38 38 H 1.48494 * 109.99929 * 178.68053 * 22 20 19 39 39 H 1.48500 * 110.00137 * 300.00682 * 22 20 19 40 40 H 1.08003 * 119.93438 * 179.76540 * 23 19 17 41 41 H 1.08009 * 119.96244 * 179.97438 * 24 23 19 42 42 H 1.07994 * 120.02013 * 180.02562 * 25 24 23 43 43 H 1.08999 * 113.61554 * 139.97516 * 26 9 8 44 44 H 1.09001 * 113.61623 * 270.88912 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5450 0.0005 5 8 4.0806 0.5868 0.0005 6 6 3.9205 2.9377 0.0000 7 1 3.4712 3.5812 -0.7564 8 6 3.9854 3.5800 1.3957 9 6 5.3557 4.1448 0.9858 10 9 5.2826 5.3944 0.3609 11 6 6.3986 4.1000 2.1044 12 16 6.0583 5.4196 3.3016 13 8 6.3008 6.6940 2.7215 14 8 4.8545 5.1536 4.0083 15 8 7.1500 5.2706 4.3515 16 6 8.3698 5.7136 3.9475 17 6 9.2533 4.8442 3.3231 18 35 8.7612 3.0416 3.0327 19 6 10.4914 5.2988 2.9089 20 6 11.4495 4.3571 2.2261 21 8 11.0179 4.1295 0.8830 22 14 13.1543 5.1083 2.2115 23 6 10.8531 6.6154 3.1254 24 6 9.9766 7.4817 3.7524 25 6 8.7361 7.0339 4.1636 26 6 5.4580 2.9684 0.0007 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5137 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 1.8933 -0.5137 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 4.0371 2.8550 2.2080 33 1 3.2281 4.3468 1.5590 34 1 6.3520 3.1334 2.6060 35 1 7.3926 4.2417 1.6802 36 1 11.4743 3.4101 2.7652 37 1 11.5893 3.5315 0.3822 38 1 14.1148 4.1756 1.5692 39 1 13.1338 6.4002 1.4795 40 1 11.8223 6.9678 2.8045 41 1 10.2620 8.5097 3.9207 42 1 8.0521 7.7114 4.6529 43 1 5.8896 3.2416 -0.9622 44 1 5.9123 2.0762 0.4316 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_10910594_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:31:52 Heat of formation + Delta-G solvation = -177.435019 kcal Electronic energy + Delta-G solvation = -36080.301905 eV Core-core repulsion = 30862.766584 eV Total energy + Delta-G solvation = -5217.535320 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -49.25733 -42.54934 -41.91840 -39.98024 -39.42551 -38.63783 -37.65485 -37.61514 -37.53507 -34.16229 -32.89198 -32.62475 -31.95870 -30.61075 -27.39326 -27.20077 -26.92848 -24.94533 -24.00177 -23.17144 -22.48625 -21.49490 -20.95609 -19.75898 -19.30371 -19.08653 -18.74156 -18.57961 -17.91559 -17.84928 -17.70878 -17.39941 -17.30232 -16.63609 -16.38238 -16.27639 -15.84147 -15.67796 -15.50995 -15.00874 -14.85550 -14.77481 -14.67510 -14.47643 -14.35887 -14.03291 -13.83600 -13.77269 -13.72161 -13.67086 -13.59734 -13.46705 -13.18588 -13.15920 -13.00732 -12.95357 -12.68372 -12.56020 -12.29714 -12.04920 -11.91082 -11.82410 -11.61909 -11.61134 -11.47952 -11.22568 -10.51505 -10.28323 -10.06861 -4.91029 -1.45673 -0.41783 -0.26106 0.05297 0.66960 0.92375 1.22484 1.49467 1.61406 1.93075 2.07510 2.13482 2.50232 2.55030 2.66696 2.84181 2.96906 3.08420 3.10934 3.37991 3.49629 3.62892 3.69032 3.75634 3.84635 3.93404 3.96343 3.99590 4.00721 4.08234 4.23025 4.27093 4.28677 4.33931 4.34865 4.55221 4.58308 4.65782 4.66505 4.77852 4.86222 4.94616 4.94916 5.01257 5.08660 5.35314 5.39384 6.53802 6.54298 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.477 3.523 5 O -0.530 6.530 6 C -0.105 4.105 7 H 0.155 0.845 8 C -0.154 4.154 9 C 0.097 3.903 10 F -0.182 7.182 11 C -0.666 4.666 12 S 2.589 3.411 13 O -0.955 6.955 14 O -0.940 6.940 15 O -0.656 6.656 16 C 0.062 3.938 17 C -0.107 4.107 18 Br -0.014 7.014 19 C -0.035 4.035 20 C -0.102 4.102 21 O -0.544 6.544 22 Si 0.776 3.224 23 C -0.091 4.091 24 C -0.066 4.066 25 C -0.091 4.091 26 C -0.113 4.113 27 H 0.097 0.903 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.071 0.929 31 H 0.070 0.930 32 H 0.124 0.876 33 H 0.114 0.886 34 H 0.178 0.822 35 H 0.166 0.834 36 H 0.095 0.905 37 H 0.398 0.602 38 H -0.285 1.285 39 H -0.274 1.274 40 H 0.173 0.827 41 H 0.190 0.810 42 H 0.162 0.838 43 H 0.112 0.888 44 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.835 -0.227 0.716 5.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.321 3.679 5 O -0.419 6.419 6 C -0.123 4.123 7 H 0.173 0.827 8 C -0.191 4.191 9 C 0.077 3.923 10 F -0.162 7.162 11 C -0.793 4.793 12 S 2.686 3.314 13 O -0.953 6.953 14 O -0.938 6.938 15 O -0.615 6.615 16 C 0.019 3.981 17 C -0.188 4.188 18 Br 0.073 6.927 19 C -0.037 4.037 20 C -0.210 4.210 21 O -0.355 6.355 22 Si 0.679 3.321 23 C -0.110 4.110 24 C -0.084 4.084 25 C -0.112 4.112 26 C -0.151 4.151 27 H 0.116 0.884 28 H 0.087 0.913 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.142 0.858 33 H 0.133 0.867 34 H 0.195 0.805 35 H 0.183 0.817 36 H 0.113 0.887 37 H 0.249 0.751 38 H -0.212 1.212 39 H -0.201 1.201 40 H 0.190 0.810 41 H 0.208 0.792 42 H 0.179 0.821 43 H 0.131 0.869 44 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 5.616 -0.081 0.826 5.677 hybrid contribution -0.422 -1.241 -1.241 1.805 sum 5.193 -1.322 -0.414 5.375 Atomic orbital electron populations 1.21839 0.90756 1.04327 1.03747 1.23307 0.96927 0.79076 1.02738 1.86533 1.23962 1.33793 1.83241 1.23580 0.80759 0.92240 0.71313 1.90669 1.61042 1.43734 1.46455 1.22566 0.97364 0.91080 1.01329 0.82727 1.23937 0.95863 1.02281 0.97066 1.21341 0.95547 0.82047 0.93318 1.92980 1.97061 1.42518 1.83625 1.32060 1.10513 1.22590 1.14164 1.05654 0.74287 0.76466 0.74985 1.93642 1.83781 1.38785 1.79137 1.93629 1.43489 1.86495 1.70183 1.85751 1.29533 1.85036 1.61207 1.18057 0.82317 0.94170 1.03599 1.22168 0.97948 0.92481 1.06235 1.96753 1.91042 1.09808 1.95123 1.19397 0.91904 0.95545 0.96891 1.25229 1.07590 1.02706 0.85458 1.86547 1.54900 1.71013 1.23003 0.93923 0.71101 0.77429 0.89678 1.21781 1.01759 0.91095 0.96384 1.21708 0.90569 1.02504 0.93631 1.21777 0.99032 0.92319 0.98093 1.23556 0.93539 0.97057 1.00993 0.88421 0.91316 0.91250 0.91087 0.91125 0.85784 0.86705 0.80464 0.81667 0.88686 0.75062 1.21193 1.20071 0.81006 0.79243 0.82057 0.86927 0.86057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.43 10.29 71.98 0.74 1.17 16 2 C 0.05 0.07 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.54 10.22 -51.44 -0.53 -2.06 16 4 C 0.48 2.25 7.49 71.24 0.53 2.79 16 5 O -0.53 -5.08 15.65 21.97 0.34 -4.73 16 6 C -0.10 -0.02 4.23 -11.01 -0.05 -0.07 16 7 H 0.16 -0.52 8.14 -2.39 -0.02 -0.54 16 8 C -0.15 -0.15 6.76 31.12 0.21 0.06 16 9 C 0.10 0.24 1.56 -10.27 -0.02 0.22 16 10 F -0.18 -1.17 16.58 44.97 0.75 -0.43 16 11 C -0.67 -1.60 3.49 71.98 0.25 -1.35 16 12 S 2.59 21.23 4.91 -56.49 -0.28 20.95 16 13 O -0.95 -11.42 15.86 -118.57 -1.88 -13.30 16 14 O -0.94 -11.93 17.85 -118.57 -2.12 -14.05 16 15 O -0.66 -4.39 9.49 -61.74 -0.59 -4.98 16 16 C 0.06 0.27 4.79 22.52 0.11 0.37 16 17 C -0.11 -0.23 5.54 22.40 0.12 -0.10 16 18 Br -0.01 -0.01 25.89 -20.37 -0.53 -0.54 16 19 C -0.04 0.05 5.29 -19.86 -0.11 -0.06 16 20 C -0.10 0.45 2.01 71.23 0.14 0.59 16 21 O -0.54 1.35 12.69 -148.98 -1.89 -0.54 16 22 Si 0.78 -5.75 30.19 68.60 2.07 -3.68 16 23 C -0.09 0.47 8.66 22.28 0.19 0.67 16 24 C -0.07 0.37 10.04 22.26 0.22 0.59 16 25 C -0.09 -0.03 9.05 22.36 0.20 0.17 16 26 C -0.11 0.03 6.86 31.12 0.21 0.24 16 27 H 0.10 -0.58 8.14 -2.38 -0.02 -0.60 16 28 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 29 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 30 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 31 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 32 H 0.12 -0.09 8.02 -2.39 -0.02 -0.11 16 33 H 0.11 -0.01 8.14 -2.39 -0.02 -0.03 16 34 H 0.18 -0.29 6.74 -2.39 -0.02 -0.30 16 35 H 0.17 0.19 5.41 -2.39 -0.01 0.17 16 36 H 0.10 -0.61 7.21 -2.39 -0.02 -0.63 16 37 H 0.40 -3.86 8.74 -74.06 -0.65 -4.51 16 38 H -0.29 0.65 7.11 99.48 0.71 1.35 16 39 H -0.27 0.83 6.74 99.48 0.67 1.50 16 40 H 0.17 -1.74 4.89 -2.91 -0.01 -1.75 16 41 H 0.19 -2.49 8.06 -2.91 -0.02 -2.51 16 42 H 0.16 -0.32 8.06 -2.91 -0.02 -0.34 16 43 H 0.11 -0.27 8.14 -2.39 -0.02 -0.29 16 44 H 0.12 -0.05 7.40 -2.39 -0.02 -0.07 16 Total: 0.00 -25.45 395.09 -0.99 -26.44 By element: Atomic # 1 Polarization: -9.33 SS G_CDS: 0.43 Total: -8.89 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: 3.22 Total: 5.82 kcal Atomic # 8 Polarization: -33.01 SS G_CDS: -6.66 Total: -39.67 kcal Atomic # 9 Polarization: -1.17 SS G_CDS: 0.75 Total: -0.43 kcal Atomic # 14 Polarization: -5.75 SS G_CDS: 2.07 Total: -3.68 kcal Atomic # 16 Polarization: 21.23 SS G_CDS: -0.28 Total: 20.95 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -0.53 Total: -0.54 kcal Total: -25.45 -0.99 -26.44 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_10910594_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -150.997 kcal (2) G-P(sol) polarization free energy of solvation -25.447 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.992 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.438 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.435 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds