Wall clock time and date at job start Mon Mar 8 2021 08:13:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.33380 * 125.20231 * 2 1 4 4 C 1.50708 * 122.54299 * 359.97438 * 3 2 1 5 5 O 1.42893 * 109.46977 * 316.92113 * 4 3 2 6 6 Si 1.86298 * 109.46874 * 76.91951 * 4 3 2 7 7 C 1.38423 * 114.92244 * 180.21105 * 3 2 1 8 8 S 1.76202 * 122.54596 * 179.76676 * 7 3 2 9 9 O 1.42094 * 106.40464 * 152.11918 * 8 7 3 10 10 O 1.42107 * 106.40012 * 19.19702 * 8 7 3 11 11 N 1.65599 * 107.21587 * 265.66416 * 8 7 3 12 12 C 1.46498 * 120.00390 * 62.23718 * 11 8 7 13 13 H 1.08995 * 112.84909 * 4.86756 * 12 11 8 14 14 C 1.53951 * 113.67041 * 136.11857 * 12 11 8 15 15 C 1.53782 * 87.02078 * 139.93005 * 14 12 11 16 16 H 1.08997 * 113.61445 * 89.23114 * 15 14 12 17 17 O 1.42900 * 113.61412 * 220.04809 * 15 14 12 18 18 C 1.42895 * 114.00246 * 249.13739 * 17 15 14 19 19 C 1.53005 * 109.47172 * 60.00138 * 18 17 15 20 20 C 1.52998 * 109.47718 * 180.02562 * 18 17 15 21 21 C 1.53002 * 109.47119 * 300.00176 * 18 17 15 22 22 C 1.53777 * 87.17492 * 334.63933 * 15 14 12 23 23 C 1.33394 * 114.91753 * 359.49625 * 7 3 2 24 24 C 1.50702 * 125.20219 * 180.25162 * 23 7 3 25 25 S 1.75880 * 109.59352 * 0.26880 * 23 7 3 26 26 H 1.09003 * 109.47125 * 183.75835 * 1 2 3 27 27 H 1.09002 * 109.46783 * 303.75662 * 1 2 3 28 28 H 1.08999 * 109.47147 * 63.75444 * 1 2 3 29 29 H 1.08994 * 109.46976 * 196.92017 * 4 3 2 30 30 H 0.96698 * 114.00234 * 301.53945 * 5 4 3 31 31 H 1.48507 * 110.00109 * 64.22063 * 6 4 3 32 32 H 1.48505 * 110.00106 * 185.53635 * 6 4 3 33 33 H 0.97006 * 119.99824 * 242.23674 * 11 8 7 34 34 H 1.09000 * 113.60906 * 25.41127 * 14 12 11 35 35 H 1.08992 * 113.66837 * 254.46324 * 14 12 11 36 36 H 1.08996 * 109.46736 * 59.99916 * 19 18 17 37 37 H 1.08998 * 109.47397 * 180.02562 * 19 18 17 38 38 H 1.09009 * 109.46832 * 300.00394 * 19 18 17 39 39 H 1.09001 * 109.47088 * 59.99548 * 20 18 17 40 40 H 1.08995 * 109.47265 * 180.02562 * 20 18 17 41 41 H 1.09005 * 109.46912 * 300.00525 * 20 18 17 42 42 H 1.09006 * 109.47021 * 60.00078 * 21 18 17 43 43 H 1.09004 * 109.46977 * 179.97438 * 21 18 17 44 44 H 1.08997 * 109.47452 * 299.99552 * 21 18 17 45 45 H 1.08998 * 113.61598 * 139.93871 * 22 15 14 46 46 H 1.09004 * 113.61823 * 270.76065 * 22 15 14 47 47 H 1.08995 * 109.47393 * 89.99941 * 24 23 7 48 48 H 1.09002 * 109.46882 * 210.00421 * 24 23 7 49 49 H 1.09000 * 109.46680 * 329.99661 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2759 1.0899 0.0000 4 6 1.7052 2.4847 -0.0006 5 8 0.6144 2.5526 -0.9211 6 14 1.1015 2.9093 1.7100 7 6 3.6379 0.8429 -0.0046 8 16 4.8357 2.1352 -0.0115 9 8 5.9946 1.6117 0.6226 10 8 4.1659 3.3054 0.4370 11 7 5.2507 2.4104 -1.5909 12 6 4.2383 2.8696 -2.5450 13 1 3.2756 3.0723 -2.0758 14 6 4.7260 4.0024 -3.4663 15 6 3.9655 3.2976 -4.6020 16 1 2.9280 3.6179 -4.6972 17 8 4.6645 3.3029 -5.8484 18 6 4.0627 4.1268 -6.8488 19 6 4.0107 5.5738 -6.3543 20 6 4.8903 4.0560 -8.1337 21 6 2.6422 3.6326 -7.1299 22 6 4.1371 1.9937 -3.8051 23 6 3.9751 -0.4478 0.0023 24 6 5.3861 -0.9771 0.0047 25 16 2.5210 -1.4372 0.0076 26 1 -0.3633 -1.0255 0.0674 27 1 -0.3633 0.5711 0.8544 28 1 -0.3633 0.4544 -0.9217 29 1 2.4776 3.1932 -0.2995 30 1 0.8512 2.3200 -1.8294 31 1 2.2439 2.9418 2.6583 32 1 0.4167 4.2269 1.6945 33 1 6.1642 2.2675 -1.8843 34 1 5.8068 4.0158 -3.6071 35 1 4.3195 4.9806 -3.2099 36 1 5.0227 5.9259 -6.1541 37 1 3.5513 6.2023 -7.1172 38 1 3.4208 5.6240 -5.4390 39 1 4.9270 3.0250 -8.4858 40 1 4.4314 4.6848 -8.8966 41 1 5.9025 4.4078 -7.9338 42 1 2.0523 3.6829 -6.2146 43 1 2.1830 4.2614 -7.8927 44 1 2.6792 2.6018 -7.4822 45 1 3.2557 1.3527 -3.8216 46 1 5.0559 1.4562 -4.0396 47 1 5.7266 -1.0991 1.0328 48 1 5.4135 -1.9407 -0.5040 49 1 6.0386 -0.2742 -0.5133 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_11572884_15065288.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:13:32 Heat of formation + Delta-G solvation = -93.107013 kcal Electronic energy + Delta-G solvation = -32762.566035 eV Core-core repulsion = 28525.125814 eV Total energy + Delta-G solvation = -4237.440221 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.126 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -41.08806 -40.29595 -38.80288 -38.45844 -37.12985 -36.97880 -34.67558 -34.10445 -33.14022 -30.90633 -28.53409 -28.47213 -28.00908 -26.79987 -25.89138 -25.11186 -23.25716 -21.46632 -21.19216 -20.64193 -20.02407 -18.99403 -18.62641 -18.15467 -18.03000 -17.39025 -16.82109 -16.32791 -16.16287 -16.11982 -15.79972 -15.41736 -15.28892 -15.05663 -14.77546 -14.62765 -14.44135 -14.35662 -14.20844 -13.86490 -13.78302 -13.62370 -13.47774 -13.36790 -13.35329 -13.26763 -13.21538 -12.96885 -12.90158 -12.89107 -12.77303 -12.73920 -12.54940 -12.47314 -12.02662 -11.96949 -11.87259 -11.72626 -11.39146 -11.35158 -10.94709 -10.64955 -10.47208 -9.99542 -9.41257 -4.75944 -0.81573 -0.42242 0.37990 0.70453 0.85742 1.52791 1.87057 1.93860 2.21477 2.59139 2.64468 3.17824 3.30832 3.34800 3.41069 3.52471 3.63290 3.69392 3.77891 3.79477 3.86556 3.92145 4.00480 4.02195 4.11033 4.18887 4.27975 4.40208 4.48392 4.52353 4.55626 4.59402 4.62699 4.64015 4.67657 4.68417 4.72356 4.78284 4.81658 4.85433 4.86138 4.92547 5.02357 5.03069 5.09585 5.18092 5.22435 5.25823 5.27580 5.73893 6.29491 6.45650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C -0.162 4.162 3 C -0.085 4.085 4 C -0.085 4.085 5 O -0.531 6.531 6 Si 0.738 3.262 7 C -0.686 4.686 8 S 2.699 3.301 9 O -0.950 6.950 10 O -0.950 6.950 11 N -1.099 6.099 12 C 0.126 3.874 13 H 0.113 0.887 14 C -0.161 4.161 15 C 0.063 3.937 16 H 0.096 0.904 17 O -0.358 6.358 18 C 0.105 3.895 19 C -0.177 4.177 20 C -0.139 4.139 21 C -0.180 4.180 22 C -0.146 4.146 23 C -0.049 4.049 24 C -0.111 4.111 25 S 0.158 5.842 26 H 0.066 0.934 27 H 0.086 0.914 28 H 0.090 0.910 29 H 0.111 0.889 30 H 0.360 0.640 31 H -0.246 1.246 32 H -0.248 1.248 33 H 0.422 0.578 34 H 0.099 0.901 35 H 0.079 0.921 36 H 0.065 0.935 37 H 0.066 0.934 38 H 0.059 0.941 39 H 0.063 0.937 40 H 0.071 0.929 41 H 0.063 0.937 42 H 0.059 0.941 43 H 0.068 0.932 44 H 0.065 0.935 45 H 0.079 0.921 46 H 0.100 0.900 47 H 0.101 0.899 48 H 0.083 0.917 49 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.418 -2.982 -4.437 5.868 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.280 4.280 3 C -0.096 4.096 4 C -0.195 4.195 5 O -0.335 6.335 6 Si 0.635 3.365 7 C -0.786 4.786 8 S 2.788 3.212 9 O -0.940 6.940 10 O -0.940 6.940 11 N -0.858 5.858 12 C 0.019 3.981 13 H 0.131 0.869 14 C -0.201 4.201 15 C 0.004 3.996 16 H 0.113 0.887 17 O -0.277 6.277 18 C 0.066 3.934 19 C -0.235 4.235 20 C -0.197 4.197 21 C -0.237 4.237 22 C -0.185 4.185 23 C -0.170 4.170 24 C -0.169 4.169 25 S 0.424 5.576 26 H 0.085 0.915 27 H 0.104 0.896 28 H 0.109 0.891 29 H 0.127 0.873 30 H 0.207 0.793 31 H -0.170 1.170 32 H -0.173 1.173 33 H 0.258 0.742 34 H 0.118 0.882 35 H 0.098 0.902 36 H 0.084 0.916 37 H 0.085 0.915 38 H 0.078 0.922 39 H 0.083 0.917 40 H 0.090 0.910 41 H 0.083 0.917 42 H 0.078 0.922 43 H 0.087 0.913 44 H 0.084 0.916 45 H 0.097 0.903 46 H 0.118 0.882 47 H 0.120 0.880 48 H 0.102 0.898 49 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -2.689 -3.476 -2.466 5.039 hybrid contribution 1.143 1.172 -1.744 2.392 sum -1.545 -2.305 -4.210 5.042 Atomic orbital electron populations 1.20429 0.86398 1.02523 1.04463 1.24423 1.00623 0.94233 1.08750 1.18559 0.90057 0.97137 1.03813 1.25872 0.93878 0.93172 1.06585 1.86773 1.34380 1.91670 1.20696 0.93936 0.84188 0.84601 0.73731 1.29401 1.11777 1.13269 1.24155 1.01756 0.73246 0.73780 0.72430 1.93614 1.47252 1.80383 1.72785 1.93503 1.75213 1.46364 1.78941 1.55466 1.19034 1.82756 1.28580 1.22081 0.91410 0.96231 0.88415 0.86915 1.24011 1.02801 0.98381 0.94891 1.23397 0.96341 0.96630 0.83228 0.88682 1.88038 1.51264 1.67588 1.20830 1.21555 0.92909 0.89951 0.88987 1.22484 1.02932 0.96252 1.01821 1.21772 1.00245 1.02901 0.94732 1.22476 0.96383 1.02475 1.02354 1.23723 1.04097 0.97014 0.93700 1.24506 1.00762 0.95008 0.96761 1.20869 0.88265 1.02405 1.05361 1.84450 0.95066 1.08731 1.69335 0.91538 0.89560 0.89124 0.87272 0.79295 1.17008 1.17257 0.74218 0.88218 0.90212 0.91627 0.91453 0.92216 0.91745 0.91000 0.91743 0.92175 0.91278 0.91581 0.90274 0.88165 0.88047 0.89800 0.89180 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.16 8.89 36.01 0.32 0.48 16 2 C -0.16 0.03 6.18 -36.00 -0.22 -0.19 16 3 C -0.09 -0.08 4.16 -106.25 -0.44 -0.52 16 4 C -0.09 -0.12 1.86 36.01 0.07 -0.05 16 5 O -0.53 0.20 10.39 -35.23 -0.37 -0.16 16 6 Si 0.74 1.90 30.50 -169.99 -5.18 -3.29 16 7 C -0.69 -0.90 5.81 -41.21 -0.24 -1.14 16 8 S 2.70 5.74 5.19 -107.50 -0.56 5.18 16 9 O -0.95 -3.96 15.36 -57.17 -0.88 -4.84 16 10 O -0.95 -4.38 13.45 -57.17 -0.77 -5.15 16 11 N -1.10 1.12 5.78 -4.12 -0.02 1.10 16 12 C 0.13 -0.21 4.38 -67.03 -0.29 -0.51 16 13 H 0.11 -0.25 6.01 -51.93 -0.31 -0.56 16 14 C -0.16 0.23 7.64 -25.83 -0.20 0.03 16 15 C 0.06 -0.09 2.80 -25.92 -0.07 -0.17 16 16 H 0.10 -0.25 5.59 -51.93 -0.29 -0.54 16 17 O -0.36 -0.15 10.00 -35.23 -0.35 -0.50 16 18 C 0.10 -0.08 1.12 -90.62 -0.10 -0.18 16 19 C -0.18 0.22 8.36 37.16 0.31 0.53 16 20 C -0.14 0.13 8.84 37.16 0.33 0.46 16 21 C -0.18 0.29 8.38 37.16 0.31 0.60 16 22 C -0.15 0.31 7.71 -25.92 -0.20 0.11 16 23 C -0.05 -0.02 6.49 -36.00 -0.23 -0.25 16 24 C -0.11 0.09 9.11 36.01 0.33 0.42 16 25 S 0.16 -0.09 23.31 -107.50 -2.51 -2.59 16 26 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 27 H 0.09 -0.21 6.43 -51.93 -0.33 -0.55 16 28 H 0.09 -0.23 7.05 -51.93 -0.37 -0.60 16 29 H 0.11 0.22 3.28 -51.93 -0.17 0.05 16 30 H 0.36 -1.30 9.06 45.56 0.41 -0.89 16 31 H -0.25 -1.28 7.11 56.52 0.40 -0.88 16 32 H -0.25 -1.17 7.11 56.52 0.40 -0.77 16 33 H 0.42 -1.14 8.96 -34.47 -0.31 -1.44 16 34 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 37 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 38 H 0.06 -0.09 7.01 -51.92 -0.36 -0.46 16 39 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 40 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 41 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 42 H 0.06 -0.13 6.23 -51.93 -0.32 -0.45 16 43 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 44 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 46 H 0.10 -0.17 8.14 -51.93 -0.42 -0.60 16 47 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 48 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 49 H 0.09 -0.09 6.43 -51.93 -0.33 -0.42 16 LS Contribution 399.95 15.07 6.03 6.03 Total: 0.00 -7.30 399.95 -12.45 -19.75 By element: Atomic # 1 Polarization: -7.65 SS G_CDS: -7.51 Total: -15.16 kcal Atomic # 6 Polarization: -0.03 SS G_CDS: -0.34 Total: -0.37 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -0.02 Total: 1.10 kcal Atomic # 8 Polarization: -8.29 SS G_CDS: -2.37 Total: -10.65 kcal Atomic # 14 Polarization: 1.90 SS G_CDS: -5.18 Total: -3.29 kcal Atomic # 16 Polarization: 5.65 SS G_CDS: -3.06 Total: 2.59 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -7.30 -12.45 -19.75 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_11572884_15065288.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.357 kcal (2) G-P(sol) polarization free energy of solvation -7.298 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.655 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.452 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.750 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds