Wall clock time and date at job start Mon Mar 8 2021 08:28:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45198 * 109.47092 * 2 1 4 4 C 1.34226 * 116.99972 * 179.97438 * 3 2 1 5 5 O 1.20829 * 120.00243 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00120 * 180.02562 * 4 3 2 7 7 H 1.09002 * 112.85047 * 50.33376 * 6 4 3 8 8 C 1.53781 * 113.61772 * 181.53091 * 6 4 3 9 9 C 1.53777 * 87.08336 * 140.06093 * 8 6 4 10 10 F 1.39901 * 113.61056 * 89.11946 * 9 8 6 11 11 C 1.52998 * 113.61649 * 219.93585 * 9 8 6 12 12 S 1.81397 * 109.47133 * 180.02562 * 11 9 8 13 13 O 1.42099 * 110.54429 * 291.62369 * 12 11 9 14 14 O 1.42106 * 110.54134 * 68.37493 * 12 11 9 15 15 O 1.52205 * 104.44976 * 179.97438 * 12 11 9 16 16 C 1.35899 * 113.99851 * 74.99780 * 15 12 11 17 17 C 1.38673 * 120.03974 * 90.00033 * 16 15 12 18 18 C 1.38382 * 119.92066 * 179.97438 * 17 16 15 19 19 F 1.35099 * 119.99766 * 180.02562 * 18 17 16 20 20 C 1.38484 * 120.00418 * 0.02562 * 18 17 16 21 21 C 1.50700 * 119.95507 * 180.02562 * 20 18 17 22 22 O 1.42899 * 109.47243 * 75.00575 * 21 20 18 23 23 Si 1.86298 * 109.46674 * 195.00458 * 21 20 18 24 24 C 1.38248 * 120.08356 * 359.97438 * 20 18 17 25 25 C 1.38133 * 120.08116 * 359.74275 * 24 20 18 26 26 C 1.53775 * 87.07992 * 334.56762 * 9 8 6 27 27 H 1.08998 * 109.46948 * 299.99504 * 1 2 3 28 28 H 1.08998 * 109.47257 * 59.99725 * 1 2 3 29 29 H 1.09002 * 109.47144 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.46999 * 239.99949 * 2 1 3 31 31 H 1.09000 * 109.47000 * 119.99798 * 2 1 3 32 32 H 1.08997 * 113.61673 * 254.61641 * 8 6 4 33 33 H 1.09005 * 113.61396 * 25.51470 * 8 6 4 34 34 H 1.09004 * 109.46784 * 300.00166 * 11 9 8 35 35 H 1.09000 * 109.47349 * 60.00231 * 11 9 8 36 36 H 1.07999 * 120.03740 * 359.95380 * 17 16 15 37 37 H 1.08997 * 109.47222 * 314.99922 * 21 20 18 38 38 H 0.96697 * 114.00370 * 179.97438 * 22 21 20 39 39 H 1.48499 * 110.00073 * 178.68284 * 23 21 20 40 40 H 1.48500 * 110.00160 * 300.00019 * 23 21 20 41 41 H 1.07995 * 119.95999 * 179.97438 * 24 20 18 42 42 H 1.08001 * 120.00764 * 180.28135 * 25 24 20 43 43 H 1.08993 * 113.61636 * 270.87622 * 26 9 8 44 44 H 1.09008 * 113.61006 * 139.97865 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0012 7 1 3.4898 3.5734 0.7744 8 6 5.4578 2.9683 -0.0359 9 6 5.3322 4.1543 -1.0067 10 9 5.2744 5.3976 -0.3678 11 6 6.3482 4.1206 -2.1502 12 16 6.1012 5.5638 -3.2211 13 8 4.8672 5.4620 -3.9183 14 8 6.4616 6.7577 -2.5399 15 8 7.1589 5.4173 -4.3058 16 6 6.8733 4.4639 -5.2311 17 6 6.1566 4.7955 -6.3710 18 6 5.8676 3.8228 -7.3120 19 9 5.1699 4.1442 -8.4233 20 6 6.2935 2.5200 -7.1145 21 6 5.9786 1.4617 -8.1402 22 8 6.8256 1.6343 -9.2781 23 14 6.2668 -0.2241 -7.4015 24 6 7.0080 2.1892 -5.9781 25 6 7.3035 3.1585 -5.0394 26 6 3.9525 3.5935 -1.3893 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 1.8934 -0.5138 -0.8900 31 1 1.8934 -0.5138 0.8900 32 1 5.9124 3.2319 0.9190 33 1 5.9017 2.0805 -0.4864 34 1 7.3578 4.1416 -1.7399 35 1 6.2110 3.2088 -2.7314 36 1 5.8241 5.8115 -6.5241 37 1 4.9363 1.5510 -8.4461 38 1 6.6781 0.9859 -9.9802 39 1 5.9295 -1.2773 -8.3926 40 1 7.6844 -0.3585 -6.9802 41 1 7.3388 1.1725 -5.8259 42 1 7.8657 2.8998 -4.1543 43 1 3.9847 2.8767 -2.2098 44 1 3.1917 4.3620 -1.5269 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_11680700_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:28:29 Heat of formation + Delta-G solvation = -240.335448 kcal Electronic energy + Delta-G solvation = -35904.283939 eV Core-core repulsion = 30554.385079 eV Total energy + Delta-G solvation = -5349.898860 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.092 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -50.11970 -49.24054 -42.43803 -41.83985 -39.81061 -39.43312 -38.40636 -37.75889 -37.49762 -37.28353 -32.94780 -32.81023 -32.40449 -31.78576 -27.46800 -27.24262 -27.01579 -24.65901 -24.10723 -23.70078 -22.34714 -21.78189 -20.97886 -19.92620 -19.29834 -19.12158 -18.85252 -18.75492 -17.97178 -17.72055 -17.68060 -17.61483 -17.43612 -17.10650 -16.72983 -16.56890 -16.24326 -16.06313 -15.96002 -15.56699 -15.44491 -15.29946 -14.73728 -14.71862 -14.52836 -14.38659 -14.21409 -13.99796 -13.84451 -13.81537 -13.76532 -13.42459 -13.34878 -13.18155 -13.16041 -13.12269 -13.02742 -12.99472 -12.63369 -12.55214 -12.45452 -12.03763 -11.97144 -11.60272 -11.58561 -11.43053 -10.75002 -10.46110 -10.14254 -5.20283 -1.37785 -0.46569 -0.31908 0.74837 0.97963 1.01972 1.35804 1.49879 1.69759 1.84593 2.27459 2.47102 2.58181 2.65326 2.72794 2.88237 2.93904 3.03224 3.12161 3.25358 3.37501 3.38576 3.50564 3.62500 3.70447 3.80172 3.88014 3.91277 3.93454 4.12357 4.13888 4.18864 4.22895 4.24239 4.40002 4.45259 4.47919 4.54247 4.55539 4.65365 4.65794 4.74148 4.75410 4.86313 4.97310 5.31813 5.36712 6.20999 6.62431 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.110 4.110 7 H 0.138 0.862 8 C -0.121 4.121 9 C 0.102 3.898 10 F -0.170 7.170 11 C -0.674 4.674 12 S 2.593 3.407 13 O -0.934 6.934 14 O -0.902 6.902 15 O -0.657 6.657 16 C 0.098 3.902 17 C -0.126 4.126 18 C 0.150 3.850 19 F -0.117 7.117 20 C -0.090 4.090 21 C -0.083 4.083 22 O -0.531 6.531 23 Si 0.693 3.307 24 C -0.071 4.071 25 C -0.139 4.139 26 C -0.143 4.143 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.082 0.918 30 H 0.072 0.928 31 H 0.071 0.929 32 H 0.102 0.898 33 H 0.122 0.878 34 H 0.159 0.841 35 H 0.158 0.842 36 H 0.159 0.841 37 H 0.085 0.915 38 H 0.385 0.615 39 H -0.254 1.254 40 H -0.248 1.248 41 H 0.156 0.844 42 H 0.155 0.845 43 H 0.117 0.883 44 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.258 -6.876 0.810 7.282 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.390 6.390 6 C -0.129 4.129 7 H 0.156 0.844 8 C -0.159 4.159 9 C 0.082 3.918 10 F -0.151 7.151 11 C -0.798 4.798 12 S 2.686 3.314 13 O -0.933 6.933 14 O -0.900 6.900 15 O -0.616 6.616 16 C 0.056 3.944 17 C -0.147 4.147 18 C 0.130 3.870 19 F -0.095 7.095 20 C -0.092 4.092 21 C -0.191 4.191 22 O -0.339 6.339 23 Si 0.593 3.407 24 C -0.088 4.088 25 C -0.159 4.159 26 C -0.181 4.181 27 H 0.087 0.913 28 H 0.088 0.912 29 H 0.101 0.899 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.120 0.880 33 H 0.140 0.860 34 H 0.177 0.823 35 H 0.176 0.824 36 H 0.177 0.823 37 H 0.103 0.897 38 H 0.234 0.766 39 H -0.179 1.179 40 H -0.173 1.173 41 H 0.173 0.827 42 H 0.172 0.828 43 H 0.135 0.865 44 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -1.515 -6.667 0.845 6.889 hybrid contribution 0.394 -0.213 -0.877 0.985 sum -1.121 -6.880 -0.033 6.971 Atomic orbital electron populations 1.21832 0.92232 1.03324 1.03787 1.23124 0.95714 0.79595 1.02836 1.86523 1.24016 1.32972 1.83471 1.23200 0.80896 0.91784 0.72293 1.90689 1.60534 1.42703 1.45072 1.22480 0.97161 0.92058 1.01188 0.84421 1.23586 0.93869 0.97504 1.00925 1.21180 0.95695 0.82452 0.92428 1.93022 1.97081 1.42147 1.82804 1.31360 1.10132 1.25063 1.13293 1.05703 0.73885 0.76639 0.75178 1.93687 1.44338 1.86800 1.68466 1.93706 1.81911 1.40605 1.73780 1.85799 1.68106 1.60112 1.47577 1.17668 1.01182 0.85579 0.89938 1.21272 0.98963 1.01745 0.92675 1.17062 0.94077 0.91986 0.83842 1.91584 1.75628 1.93070 1.49230 1.19572 1.00066 0.93125 0.96398 1.24798 0.97331 1.07335 0.89683 1.86592 1.61610 1.57337 1.28364 0.94989 0.84531 0.73675 0.87506 1.20892 0.95557 1.00335 0.92035 1.21359 1.01538 0.90536 1.02453 1.23785 0.95951 1.01744 0.96621 0.91335 0.91242 0.89948 0.90918 0.91018 0.87992 0.85983 0.82275 0.82410 0.82312 0.89747 0.76587 1.17873 1.17313 0.82715 0.82767 0.86478 0.87124 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.41 10.29 37.16 0.38 0.79 16 2 C 0.06 -0.07 6.19 37.16 0.23 0.16 16 3 O -0.35 -0.08 10.22 -39.25 -0.40 -0.48 16 4 C 0.48 0.07 7.49 36.01 0.27 0.34 16 5 O -0.50 -1.18 15.66 -18.75 -0.29 -1.48 16 6 C -0.11 0.22 4.23 -90.96 -0.39 -0.17 16 7 H 0.14 -0.43 8.14 -51.93 -0.42 -0.85 16 8 C -0.12 0.32 6.85 -25.92 -0.18 0.14 16 9 C 0.10 -0.17 1.62 -89.81 -0.15 -0.32 16 10 F -0.17 -0.19 16.28 2.25 0.04 -0.15 16 11 C -0.67 2.19 5.19 37.16 0.19 2.38 16 12 S 2.59 2.61 4.89 -107.50 -0.53 2.08 16 13 O -0.93 -2.16 16.26 -67.03 -1.09 -3.25 16 14 O -0.90 -4.53 17.53 -67.04 -1.18 -5.70 16 15 O -0.66 -0.48 10.05 -51.75 -0.52 -1.00 16 16 C 0.10 0.01 4.79 -39.22 -0.19 -0.18 16 17 C -0.13 -0.13 9.03 -39.37 -0.36 -0.48 16 18 C 0.15 0.16 7.24 -39.44 -0.29 -0.12 16 19 F -0.12 -0.27 16.75 2.25 0.04 -0.23 16 20 C -0.09 0.05 5.30 -104.53 -0.55 -0.51 16 21 C -0.08 0.13 2.44 36.01 0.09 0.22 16 22 O -0.53 0.05 12.86 -35.23 -0.45 -0.41 16 23 Si 0.69 -2.27 30.19 -169.99 -5.13 -7.41 16 24 C -0.07 0.18 8.65 -39.62 -0.34 -0.16 16 25 C -0.14 0.37 8.47 -39.42 -0.33 0.04 16 26 C -0.14 0.34 7.08 -25.92 -0.18 0.16 16 27 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 30 H 0.07 -0.11 8.13 -51.93 -0.42 -0.54 16 31 H 0.07 -0.08 8.13 -51.93 -0.42 -0.50 16 32 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 33 H 0.12 -0.41 7.41 -51.93 -0.39 -0.79 16 34 H 0.16 -0.90 8.14 -51.92 -0.42 -1.32 16 35 H 0.16 -1.02 6.43 -51.92 -0.33 -1.36 16 36 H 0.16 0.06 8.06 -52.49 -0.42 -0.36 16 37 H 0.08 -0.23 7.90 -51.93 -0.41 -0.64 16 38 H 0.39 -1.57 8.74 45.56 0.40 -1.17 16 39 H -0.25 0.25 7.11 56.52 0.40 0.65 16 40 H -0.25 0.29 6.74 56.52 0.38 0.67 16 41 H 0.16 -0.73 4.89 -52.49 -0.26 -0.99 16 42 H 0.15 -0.97 7.52 -52.49 -0.39 -1.37 16 43 H 0.12 -0.47 7.92 -51.93 -0.41 -0.88 16 44 H 0.11 -0.28 8.14 -51.92 -0.42 -0.71 16 LS Contribution 391.54 15.07 5.90 5.90 Total: 0.00 -12.02 391.54 -10.64 -22.66 By element: Atomic # 1 Polarization: -7.59 SS G_CDS: -5.24 Total: -12.83 kcal Atomic # 6 Polarization: 4.08 SS G_CDS: -1.79 Total: 2.29 kcal Atomic # 8 Polarization: -8.38 SS G_CDS: -3.93 Total: -12.32 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.07 Total: -0.38 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: -5.13 Total: -7.41 kcal Atomic # 16 Polarization: 2.61 SS G_CDS: -0.53 Total: 2.08 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -12.02 -10.64 -22.66 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_11680700_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -217.676 kcal (2) G-P(sol) polarization free energy of solvation -12.016 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.644 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.660 kcal (6) G-S(sol) free energy of system = (1) + (5) -240.335 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds