Wall clock time and date at job start Mon Mar 8 2021 09:11:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34222 * 116.99823 * 2 1 4 4 O 1.20829 * 120.00394 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00114 * 179.97438 * 3 2 1 6 6 N 1.46502 * 109.46845 * 314.37009 * 5 3 2 7 7 S 1.65600 * 120.00081 * 52.76827 * 6 5 3 8 8 O 1.42095 * 106.40199 * 26.76963 * 7 6 5 9 9 O 1.42095 * 106.40183 * 159.69017 * 7 6 5 10 10 C 1.76202 * 107.21396 * 273.22904 * 7 6 5 11 11 C 1.38221 * 119.99655 * 164.35624 * 10 7 6 12 12 C 1.50696 * 119.99893 * 359.97438 * 11 10 7 13 13 O 1.42902 * 109.47136 * 74.69856 * 12 11 10 14 14 Si 1.86302 * 109.47110 * 194.69343 * 12 11 10 15 15 C 1.38252 * 119.99738 * 179.78928 * 11 10 7 16 16 C 1.38216 * 120.00178 * 0.44321 * 15 11 10 17 17 C 1.38260 * 119.99775 * 359.81261 * 16 15 11 18 18 C 1.38215 * 120.00176 * 359.97438 * 17 16 15 19 19 C 1.53003 * 109.47426 * 194.37012 * 5 3 2 20 20 C 1.52996 * 109.47336 * 179.97438 * 19 5 3 21 21 C 1.53000 * 109.46909 * 59.99921 * 20 19 5 22 22 H 1.09007 * 109.47177 * 180.02562 * 21 20 19 23 23 C 1.52998 * 109.47296 * 60.00250 * 21 20 19 24 24 C 1.52993 * 109.47383 * 299.99845 * 21 20 19 25 25 C 1.52994 * 109.47202 * 74.37084 * 5 3 2 26 26 H 1.09005 * 109.47760 * 300.00213 * 1 2 3 27 27 H 1.09005 * 109.47237 * 60.00787 * 1 2 3 28 28 H 1.09007 * 109.47454 * 180.02562 * 1 2 3 29 29 H 0.97004 * 119.99567 * 233.03769 * 6 5 3 30 30 H 1.09001 * 109.47414 * 314.69674 * 12 11 10 31 31 H 0.96692 * 114.00319 * 65.20847 * 13 12 11 32 32 H 1.48500 * 109.99685 * 58.68267 * 14 12 11 33 33 H 1.48494 * 110.00049 * 179.97438 * 14 12 11 34 34 H 1.08006 * 120.00118 * 180.27785 * 15 11 10 35 35 H 1.07996 * 120.00013 * 179.83318 * 16 15 11 36 36 H 1.08002 * 119.99837 * 180.02562 * 17 16 15 37 37 H 1.07996 * 119.99907 * 180.02562 * 18 17 16 38 38 H 1.08996 * 109.46844 * 300.00095 * 19 5 3 39 39 H 1.09000 * 109.47042 * 59.99956 * 19 5 3 40 40 H 1.08996 * 109.47090 * 180.02562 * 20 19 5 41 41 H 1.08997 * 109.47152 * 300.00447 * 20 19 5 42 42 H 1.09005 * 109.46873 * 59.99444 * 23 21 20 43 43 H 1.09000 * 109.47389 * 179.97438 * 23 21 20 44 44 H 1.08998 * 109.46887 * 299.99776 * 23 21 20 45 45 H 1.09000 * 109.47239 * 179.97438 * 24 21 20 46 46 H 1.08997 * 109.47532 * 299.99997 * 24 21 20 47 47 H 1.09005 * 109.47299 * 300.00244 * 25 5 3 48 48 H 1.08995 * 109.47613 * 60.00155 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1959 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5662 1.2749 0.0006 6 7 4.1040 0.3361 0.9884 7 16 3.6446 -1.2545 0.9548 8 8 3.2908 -1.5417 -0.3911 9 8 4.6409 -1.9750 1.6672 10 6 2.1627 -1.3893 1.8985 11 6 1.3727 -2.5181 1.7870 12 6 1.7786 -3.6330 0.8580 13 8 2.8627 -4.3634 1.4355 14 14 0.3321 -4.7764 0.5910 15 6 0.2123 -2.6257 2.5307 16 6 -0.1627 -1.6008 3.3788 17 6 0.6248 -0.4694 3.4862 18 6 1.7872 -0.3637 2.7461 19 6 4.0023 2.6971 0.3585 20 6 5.5301 2.7771 0.3597 21 6 6.0608 2.4152 -1.0289 22 1 7.1494 2.4717 -1.0280 23 6 5.4997 3.3955 -2.0609 24 6 5.6249 0.9930 -1.3868 25 6 4.0964 0.9133 -1.3882 26 1 -0.3635 0.5139 0.8900 27 1 -0.3634 0.5137 -0.8901 28 1 -0.3634 -1.0277 0.0005 29 1 4.7262 0.6471 1.6645 30 1 2.0916 -3.2136 -0.0981 31 1 2.6324 -4.8310 2.2499 32 1 -0.8127 -4.0222 0.0204 33 1 0.7193 -5.8800 -0.3239 34 1 -0.4027 -3.5096 2.4470 35 1 -1.0706 -1.6837 3.9577 36 1 0.3320 0.3313 4.1492 37 1 2.4025 0.5199 2.8304 38 1 3.6021 3.3956 -0.3764 39 1 3.6245 2.9548 1.3479 40 1 5.8407 3.7902 0.6151 41 1 5.9299 2.0786 1.0948 42 1 5.8103 4.4088 -1.8058 43 1 5.8781 3.1379 -3.0501 44 1 4.4112 3.3385 -2.0617 45 1 6.0026 0.7353 -2.3763 46 1 6.0247 0.2945 -0.6517 47 1 3.7858 -0.1000 -1.6433 48 1 3.6963 1.6117 -2.1232 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_11976206_2726874.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:11:18 Heat of formation + Delta-G solvation = -137.952798 kcal Electronic energy + Delta-G solvation = -36300.609910 eV Core-core repulsion = 31836.239688 eV Total energy + Delta-G solvation = -4464.370221 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.30428 -40.80062 -40.09931 -38.13191 -37.80501 -37.44811 -36.67225 -35.83033 -32.88684 -32.51614 -32.01943 -31.20911 -29.17720 -27.83412 -26.96142 -24.57550 -24.47323 -23.93203 -22.90069 -21.88164 -20.79260 -19.74745 -19.25148 -18.89508 -18.76871 -18.04254 -17.61053 -17.36995 -17.11504 -16.82025 -16.71356 -16.12974 -16.02668 -15.74203 -15.67280 -15.50404 -15.09330 -15.05677 -14.59628 -14.23934 -14.21660 -14.00514 -13.86412 -13.68462 -13.64925 -13.49469 -13.21066 -13.11784 -12.92876 -12.88814 -12.79806 -12.70246 -12.37797 -12.32607 -12.16737 -12.08854 -11.94192 -11.89295 -11.54773 -11.44178 -11.36085 -11.02950 -10.72299 -10.58198 -10.34868 -10.11151 -5.11000 -0.59814 -0.27806 0.04757 0.91659 1.16187 1.45878 1.57040 1.90246 1.93201 2.32273 2.72750 3.12407 3.31018 3.37924 3.46095 3.51052 3.59306 3.72845 3.78642 3.82395 3.91757 3.99206 4.05183 4.08391 4.09570 4.16560 4.19829 4.28724 4.35615 4.44470 4.49956 4.50943 4.52116 4.55495 4.72602 4.73201 4.79353 4.84263 4.90206 4.94432 5.01956 5.04924 5.09375 5.17477 5.18338 5.20938 5.26038 5.33029 5.48310 5.63885 5.67019 6.49959 6.51043 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.348 6.348 3 C 0.443 3.557 4 O -0.485 6.485 5 C 0.209 3.791 6 N -1.108 6.108 7 S 2.699 3.301 8 O -0.934 6.934 9 O -0.939 6.939 10 C -0.614 4.614 11 C -0.016 4.016 12 C -0.131 4.131 13 O -0.527 6.527 14 Si 0.696 3.304 15 C -0.130 4.130 16 C -0.067 4.067 17 C -0.128 4.128 18 C -0.043 4.043 19 C -0.110 4.110 20 C -0.115 4.115 21 C -0.097 4.097 22 H 0.077 0.923 23 C -0.155 4.155 24 C -0.111 4.111 25 C -0.155 4.155 26 H 0.065 0.935 27 H 0.068 0.932 28 H 0.099 0.901 29 H 0.424 0.576 30 H 0.148 0.852 31 H 0.381 0.619 32 H -0.252 1.252 33 H -0.247 1.247 34 H 0.138 0.862 35 H 0.135 0.865 36 H 0.132 0.868 37 H 0.127 0.873 38 H 0.096 0.904 39 H 0.078 0.922 40 H 0.076 0.924 41 H 0.067 0.933 42 H 0.056 0.944 43 H 0.057 0.943 44 H 0.060 0.940 45 H 0.075 0.925 46 H 0.065 0.935 47 H 0.117 0.883 48 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.476 1.415 3.523 4.533 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 O -0.264 6.264 3 C 0.283 3.717 4 O -0.370 6.370 5 C 0.118 3.882 6 N -0.869 5.869 7 S 2.787 3.213 8 O -0.924 6.924 9 O -0.929 6.929 10 C -0.700 4.700 11 C -0.018 4.018 12 C -0.241 4.241 13 O -0.332 6.332 14 Si 0.596 3.404 15 C -0.148 4.148 16 C -0.085 4.085 17 C -0.147 4.147 18 C -0.062 4.062 19 C -0.149 4.149 20 C -0.153 4.153 21 C -0.115 4.115 22 H 0.096 0.904 23 C -0.212 4.212 24 C -0.148 4.148 25 C -0.194 4.194 26 H 0.084 0.916 27 H 0.087 0.913 28 H 0.117 0.883 29 H 0.260 0.740 30 H 0.165 0.835 31 H 0.228 0.772 32 H -0.177 1.177 33 H -0.171 1.171 34 H 0.155 0.845 35 H 0.153 0.847 36 H 0.150 0.850 37 H 0.145 0.855 38 H 0.115 0.885 39 H 0.097 0.903 40 H 0.095 0.905 41 H 0.086 0.914 42 H 0.075 0.925 43 H 0.076 0.924 44 H 0.078 0.922 45 H 0.094 0.906 46 H 0.084 0.916 47 H 0.135 0.865 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -2.677 0.864 1.868 3.377 hybrid contribution -0.397 1.098 0.697 1.360 sum -3.074 1.962 2.565 4.458 Atomic orbital electron populations 1.23295 0.75550 1.03932 1.02752 1.86628 1.24337 1.32241 1.83177 1.24225 0.91959 0.82415 0.73118 1.90699 1.66387 1.36124 1.43822 1.20044 0.84180 0.92606 0.91339 1.55872 1.59625 1.28713 1.42736 1.02089 0.73548 0.71188 0.74432 1.93486 1.84057 1.81817 1.33081 1.93660 1.56538 1.67951 1.74767 1.30645 1.23130 1.01372 1.14882 1.19808 0.93396 0.93585 0.95007 1.25887 1.02324 0.96843 0.99046 1.86652 1.34671 1.67111 1.44752 0.95036 0.75858 0.80692 0.88771 1.21120 0.96479 0.99546 0.97654 1.21399 0.98820 0.92591 0.95738 1.21296 0.94990 0.98628 0.99785 1.20829 0.96356 0.96042 0.92936 1.21786 0.97236 0.91993 1.03894 1.21615 0.93661 1.02532 0.97476 1.21171 1.00560 0.95015 0.94750 0.90418 1.21976 1.01455 0.98949 0.98807 1.21534 0.93951 0.96715 1.02608 1.22519 0.97537 1.06385 0.92948 0.91616 0.91349 0.88290 0.73990 0.83502 0.77190 1.17673 1.17109 0.84509 0.84686 0.84990 0.85472 0.88529 0.90313 0.90487 0.91399 0.92464 0.92414 0.92160 0.90609 0.91584 0.86497 0.89605 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.02 9.95 101.05 1.01 1.02 16 2 O -0.35 -0.63 4.02 -46.81 -0.19 -0.82 16 3 C 0.44 0.83 6.00 36.01 0.22 1.05 16 4 O -0.49 -1.79 15.74 -18.75 -0.30 -2.08 16 5 C 0.21 0.03 0.63 -132.97 -0.08 -0.05 16 6 N -1.11 0.29 3.54 -0.40 0.00 0.29 16 7 S 2.70 7.69 4.28 -107.50 -0.46 7.23 16 8 O -0.93 -3.98 10.49 -66.53 -0.70 -4.68 16 9 O -0.94 -5.64 17.76 -57.40 -1.02 -6.65 16 10 C -0.61 -0.90 3.27 -39.58 -0.13 -1.03 16 11 C -0.02 -0.01 5.18 -104.63 -0.54 -0.55 16 12 C -0.13 -0.20 2.04 36.00 0.07 -0.13 16 13 O -0.53 -1.16 12.51 -35.23 -0.44 -1.60 16 14 Si 0.70 -0.55 29.83 -169.99 -5.07 -5.62 16 15 C -0.13 0.20 8.66 -39.58 -0.34 -0.14 16 16 C -0.07 0.15 10.05 -39.58 -0.40 -0.25 16 17 C -0.13 0.19 10.05 -39.58 -0.40 -0.21 16 18 C -0.04 0.01 7.82 -39.58 -0.31 -0.30 16 19 C -0.11 0.14 3.93 -26.73 -0.11 0.04 16 20 C -0.12 0.26 5.28 -26.73 -0.14 0.12 16 21 C -0.10 0.15 3.19 -90.62 -0.29 -0.14 16 22 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 23 C -0.15 0.22 8.50 37.16 0.32 0.54 16 24 C -0.11 0.04 5.29 -26.71 -0.14 -0.10 16 25 C -0.16 -0.09 4.32 -26.71 -0.12 -0.20 16 26 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 27 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 28 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.42 -1.12 7.25 -34.47 -0.25 -1.37 16 30 H 0.15 0.49 5.51 -51.93 -0.29 0.20 16 31 H 0.38 -0.94 8.60 45.56 0.39 -0.54 16 32 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 33 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 34 H 0.14 -0.57 5.13 -52.48 -0.27 -0.84 16 35 H 0.14 -0.62 8.06 -52.49 -0.42 -1.04 16 36 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 37 H 0.13 -0.24 7.35 -52.49 -0.39 -0.63 16 38 H 0.10 -0.07 6.24 -51.93 -0.32 -0.39 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.07 -0.21 6.73 -51.93 -0.35 -0.56 16 42 H 0.06 -0.09 8.14 -51.93 -0.42 -0.52 16 43 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 44 H 0.06 -0.07 4.81 -51.93 -0.25 -0.32 16 45 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.07 -0.01 7.60 -51.93 -0.39 -0.40 16 47 H 0.12 0.25 5.36 -51.93 -0.28 -0.03 16 48 H 0.09 0.00 6.43 -51.93 -0.33 -0.33 16 LS Contribution 366.93 15.07 5.53 5.53 Total: 0.00 -9.80 366.93 -10.61 -20.40 By element: Atomic # 1 Polarization: -5.08 SS G_CDS: -6.58 Total: -11.66 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: -1.39 Total: -0.34 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: 0.00 Total: 0.29 kcal Atomic # 8 Polarization: -13.19 SS G_CDS: -2.64 Total: -15.83 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -5.07 Total: -5.62 kcal Atomic # 16 Polarization: 7.69 SS G_CDS: -0.46 Total: 7.23 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -9.80 -10.61 -20.40 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_11976206_2726874.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.550 kcal (2) G-P(sol) polarization free energy of solvation -9.797 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.347 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.605 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.403 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds