Wall clock time and date at job start Mon Mar 8 2021 12:46:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86297 * 109.47015 * 2 1 4 4 C 1.50702 * 109.47175 * 119.99836 * 2 1 3 5 5 C 1.33392 * 122.53798 * 75.00162 * 4 2 1 6 6 S 1.76202 * 125.20396 * 0.02562 * 5 4 2 7 7 O 1.42101 * 106.39609 * 66.18255 * 6 5 4 8 8 O 1.42098 * 106.40510 * 293.26406 * 6 5 4 9 9 N 1.65601 * 107.21792 * 179.71895 * 6 5 4 10 10 C 1.46497 * 119.99681 * 65.00177 * 9 6 5 11 11 C 1.53000 * 109.46802 * 164.99839 * 10 9 6 12 12 C 1.53003 * 109.46943 * 180.02562 * 11 10 9 13 13 H 1.09002 * 112.85017 * 45.33263 * 12 11 10 14 14 C 1.53786 * 113.61503 * 176.52881 * 12 11 10 15 15 C 1.53783 * 87.08050 * 140.06140 * 14 12 11 16 16 H 1.08993 * 113.61424 * 220.01734 * 15 14 12 17 17 F 1.39899 * 113.61053 * 89.11871 * 15 14 12 18 18 C 1.53781 * 113.61337 * 274.13674 * 12 11 10 19 19 S 1.75885 * 109.59125 * 179.75368 * 5 4 2 20 20 C 1.75882 * 90.97116 * 0.22568 * 19 5 4 21 21 C 1.33386 * 109.59549 * 0.02562 * 20 19 5 22 22 H 0.96695 * 113.99882 * 299.99917 * 1 2 3 23 23 H 1.08996 * 109.47209 * 239.99992 * 2 1 3 24 24 H 1.48504 * 110.00133 * 299.99702 * 3 2 1 25 25 H 1.48497 * 110.00134 * 61.31859 * 3 2 1 26 26 H 0.96991 * 120.00069 * 245.00378 * 9 6 5 27 27 H 1.09007 * 109.47390 * 45.00019 * 10 9 6 28 28 H 1.08994 * 109.47414 * 285.00107 * 10 9 6 29 29 H 1.08997 * 109.47222 * 60.00499 * 11 10 9 30 30 H 1.09004 * 109.47285 * 299.99755 * 11 10 9 31 31 H 1.08992 * 113.61675 * 254.61398 * 14 12 11 32 32 H 1.09005 * 113.61030 * 25.43048 * 14 12 11 33 33 H 1.08999 * 113.61567 * 334.48261 * 18 12 11 34 34 H 1.08998 * 113.61196 * 105.38615 * 18 12 11 35 35 H 1.07997 * 125.20253 * 179.97438 * 20 19 5 36 36 H 1.08000 * 122.53849 * 179.97438 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.8962 -2.0378 1.3572 6 16 1.2764 -3.1577 0.1463 7 8 2.1525 -3.0678 -0.9689 8 8 -0.1217 -2.9195 0.0576 9 7 1.4525 -4.6869 0.7571 10 6 0.6993 -5.0916 1.9467 11 6 0.7424 -6.6148 2.0837 12 6 -0.0448 -7.0376 3.3257 13 1 -1.0057 -6.5302 3.4109 14 6 -0.1348 -8.5619 3.5087 15 6 0.0691 -8.3144 5.0127 16 1 0.7230 -9.0438 5.4906 17 9 -1.1242 -8.1111 5.7140 18 6 0.7846 -7.0077 4.6204 19 16 2.5702 -2.4996 2.9148 20 6 2.8644 -0.8138 3.3209 21 6 2.4607 -0.0346 2.3164 22 1 -0.3933 0.4417 0.7650 23 1 1.7924 -0.5138 -0.8899 24 1 1.5615 2.4679 -1.2086 25 1 1.5879 2.4585 1.2242 26 1 2.0543 -5.3145 0.3274 27 1 -0.3361 -4.7647 1.8499 28 1 1.1434 -4.6345 2.8309 29 1 1.7777 -6.9418 2.1806 30 1 0.2982 -7.0719 1.1994 31 1 -1.1133 -8.9742 3.2628 32 1 0.6843 -9.1071 3.0396 33 1 1.8553 -7.1286 4.4559 34 1 0.5476 -6.1661 5.2712 35 1 3.3040 -0.4632 4.2430 36 1 2.5443 1.0417 2.3464 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_14412254_13652106.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:46:09 Heat of formation + Delta-G solvation = -94.574952 kcal Electronic energy + Delta-G solvation = -23269.797489 eV Core-core repulsion = 19503.672306 eV Total energy + Delta-G solvation = -3766.125183 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.054 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -48.63614 -40.10732 -39.50736 -38.41326 -37.29144 -37.07508 -36.61718 -31.48120 -31.24125 -28.11225 -26.80255 -25.66832 -24.36847 -22.97433 -21.68383 -20.54036 -19.97008 -19.72440 -18.72997 -18.09687 -17.45598 -17.13351 -16.80772 -16.67359 -16.41500 -16.24818 -15.96880 -15.85966 -15.67825 -15.30476 -14.74763 -14.25257 -14.12591 -14.03168 -13.68816 -13.59735 -13.43012 -13.33895 -13.25132 -13.11693 -12.80013 -12.53472 -12.48988 -12.33904 -11.89004 -11.83548 -11.60547 -11.19021 -10.95647 -10.81952 -10.68551 -10.41403 -9.62133 -4.98865 -0.83458 -0.67337 0.21092 0.64977 1.13724 1.25003 1.52637 1.84933 1.89854 2.47213 3.18785 3.31030 3.36604 3.43363 3.47795 3.64334 3.73557 3.85798 3.95583 4.00075 4.14063 4.18201 4.29052 4.39075 4.48784 4.59892 4.69713 4.77805 4.81880 4.85483 4.88714 4.97203 5.06237 5.07733 5.18161 5.24605 5.53482 5.92288 6.35141 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.135 4.135 3 Si 0.803 3.197 4 C 0.000 4.000 5 C -0.796 4.796 6 S 2.722 3.278 7 O -0.983 6.983 8 O -0.969 6.969 9 N -1.107 6.107 10 C 0.105 3.895 11 C -0.109 4.109 12 C -0.113 4.113 13 H 0.085 0.915 14 C -0.153 4.153 15 C 0.043 3.957 16 H 0.112 0.888 17 F -0.222 7.222 18 C -0.153 4.153 19 S 0.236 5.764 20 C -0.151 4.151 21 C -0.176 4.176 22 H 0.390 0.610 23 H 0.110 0.890 24 H -0.296 1.296 25 H -0.250 1.250 26 H 0.433 0.567 27 H 0.072 0.928 28 H 0.080 0.920 29 H 0.099 0.901 30 H 0.078 0.922 31 H 0.070 0.930 32 H 0.121 0.879 33 H 0.124 0.876 34 H 0.077 0.923 35 H 0.213 0.787 36 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.059 -1.092 6.230 9.478 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.243 4.243 3 Si 0.702 3.298 4 C -0.018 4.018 5 C -0.998 4.998 6 S 2.810 3.190 7 O -0.973 6.973 8 O -0.959 6.959 9 N -0.873 5.873 10 C -0.021 4.021 11 C -0.147 4.147 12 C -0.132 4.132 13 H 0.103 0.897 14 C -0.191 4.191 15 C 0.008 3.992 16 H 0.130 0.870 17 F -0.203 7.203 18 C -0.191 4.191 19 S 0.503 5.497 20 C -0.289 4.289 21 C -0.205 4.205 22 H 0.240 0.760 23 H 0.128 0.872 24 H -0.223 1.223 25 H -0.175 1.175 26 H 0.271 0.729 27 H 0.090 0.910 28 H 0.098 0.902 29 H 0.117 0.883 30 H 0.097 0.903 31 H 0.088 0.912 32 H 0.139 0.861 33 H 0.142 0.858 34 H 0.095 0.905 35 H 0.229 0.771 36 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 6.684 -1.637 5.790 8.993 hybrid contribution -1.258 0.981 0.026 1.596 sum 5.426 -0.656 5.816 7.981 Atomic orbital electron populations 1.86740 1.16842 1.80757 1.50039 1.25820 0.85019 1.16186 0.97282 0.93580 0.89468 0.68619 0.78125 1.19126 0.94288 0.91405 0.96974 1.35485 1.27837 1.14505 1.22007 1.00856 0.73194 0.72507 0.72474 1.93572 1.67918 1.86539 1.49317 1.93602 1.31765 1.84951 1.85574 1.55269 1.59072 1.29792 1.43117 1.21651 0.96092 0.98506 0.85811 1.21736 1.02507 0.92240 0.98267 1.22543 0.99545 0.96470 0.94688 0.89699 1.23634 1.04371 0.96798 0.94299 1.22777 0.82870 1.00750 0.92849 0.87018 1.92776 1.50187 1.96357 1.80962 1.23780 1.01492 0.96896 0.96888 1.83851 1.54790 1.06676 1.04402 1.26651 1.01868 0.96174 1.04177 1.20478 1.03941 1.03211 0.92827 0.75997 0.87238 1.22310 1.17456 0.72918 0.91003 0.90215 0.88276 0.90307 0.91155 0.86083 0.85766 0.90462 0.77055 0.80632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -4.48 12.32 -148.36 -1.83 -6.31 16 2 C -0.13 -0.65 2.33 71.24 0.17 -0.48 16 3 Si 0.80 -1.23 30.47 68.60 2.09 0.86 16 4 C 0.00 0.00 5.13 -20.92 -0.11 -0.11 16 5 C -0.80 -2.76 6.46 66.72 0.43 -2.33 16 6 S 2.72 20.36 5.07 -56.49 -0.29 20.07 16 7 O -0.98 -12.66 17.48 -128.00 -2.24 -14.90 16 8 O -0.97 -14.17 16.93 -125.86 -2.13 -16.30 16 9 N -1.11 1.52 5.81 -187.50 -1.09 0.43 16 10 C 0.11 -0.40 5.97 86.38 0.52 0.12 16 11 C -0.11 0.81 5.18 30.60 0.16 0.97 16 12 C -0.11 0.62 3.61 -10.26 -0.04 0.59 16 13 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 14 C -0.15 0.86 7.54 31.12 0.23 1.09 16 15 C 0.04 -0.15 5.70 31.21 0.18 0.03 16 16 H 0.11 -0.77 8.14 -2.39 -0.02 -0.79 16 17 F -0.22 -1.06 17.38 44.97 0.78 -0.28 16 18 C -0.15 1.08 7.55 31.21 0.24 1.31 16 19 S 0.24 -0.96 21.09 -56.49 -1.19 -2.15 16 20 C -0.15 0.98 11.23 66.72 0.75 1.73 16 21 C -0.18 0.61 8.74 21.22 0.19 0.80 16 22 H 0.39 0.22 8.70 -74.06 -0.64 -0.43 16 23 H 0.11 0.80 7.23 -2.39 -0.02 0.78 16 24 H -0.30 -1.80 7.11 99.48 0.71 -1.09 16 25 H -0.25 0.53 6.80 99.48 0.68 1.20 16 26 H 0.43 -2.60 8.65 -96.75 -0.84 -3.43 16 27 H 0.07 -0.05 7.75 -2.38 -0.02 -0.07 16 28 H 0.08 -0.55 6.25 -2.39 -0.01 -0.56 16 29 H 0.10 -1.15 7.88 -2.39 -0.02 -1.17 16 30 H 0.08 -0.54 8.14 -2.38 -0.02 -0.55 16 31 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.12 -1.18 8.10 -2.38 -0.02 -1.20 16 33 H 0.12 -1.45 7.92 -2.39 -0.02 -1.47 16 34 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 35 H 0.21 -2.88 8.06 -2.91 -0.02 -2.90 16 36 H 0.18 -1.41 5.54 -2.91 -0.02 -1.43 16 Total: 0.00 -25.35 326.66 -3.53 -28.88 By element: Atomic # 1 Polarization: -13.68 SS G_CDS: -0.34 Total: -14.02 kcal Atomic # 6 Polarization: 1.00 SS G_CDS: 2.71 Total: 3.71 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -1.09 Total: 0.43 kcal Atomic # 8 Polarization: -31.31 SS G_CDS: -6.20 Total: -37.51 kcal Atomic # 9 Polarization: -1.06 SS G_CDS: 0.78 Total: -0.28 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: 2.09 Total: 0.86 kcal Atomic # 16 Polarization: 19.40 SS G_CDS: -1.48 Total: 17.92 kcal Total: -25.35 -3.53 -28.88 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_14412254_13652106.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.697 kcal (2) G-P(sol) polarization free energy of solvation -25.353 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.878 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.575 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds