Wall clock time and date at job start Mon Mar 8 2021 11:35:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 O 1.45203 * 109.47272 * 2 1 4 4 C 1.34222 * 117.00181 * 179.97438 * 3 2 1 5 5 O 1.20827 * 120.00572 * 0.02562 * 4 3 2 6 6 C 1.50710 * 119.99955 * 179.97438 * 4 3 2 7 7 H 1.09000 * 112.85158 * 311.19860 * 6 4 3 8 8 C 1.53953 * 113.66476 * 82.44227 * 6 4 3 9 9 C 1.53780 * 87.01976 * 139.93074 * 8 6 4 10 10 F 1.39905 * 113.61071 * 89.23111 * 9 8 6 11 11 C 1.53000 * 113.61945 * 220.04587 * 9 8 6 12 12 S 1.81399 * 109.47189 * 284.14172 * 11 9 8 13 13 O 1.42094 * 110.54417 * 68.37191 * 12 11 9 14 14 O 1.42095 * 110.54203 * 291.62033 * 12 11 9 15 15 O 1.52195 * 104.45077 * 179.97438 * 12 11 9 16 16 C 1.35901 * 114.00034 * 74.99528 * 15 12 11 17 17 C 1.38708 * 120.05359 * 90.00522 * 16 15 12 18 18 C 1.50694 * 120.03038 * 359.97438 * 17 16 15 19 19 O 1.42901 * 109.47118 * 74.72445 * 18 17 16 20 20 Si 1.86298 * 109.47775 * 194.72690 * 18 17 16 21 21 C 1.38171 * 119.94570 * 179.72675 * 17 16 15 22 22 C 1.38247 * 120.05134 * 0.27181 * 21 17 16 23 23 C 1.38284 * 120.11369 * 359.97438 * 22 21 17 24 24 C 1.50701 * 119.97345 * 180.02562 * 23 22 21 25 25 F 1.39909 * 109.46772 * 359.97438 * 24 23 22 26 26 F 1.39896 * 109.47485 * 120.00037 * 24 23 22 27 27 F 1.39902 * 109.46989 * 240.00054 * 24 23 22 28 28 C 1.38127 * 120.05792 * 0.02562 * 23 22 21 29 29 C 1.53778 * 87.17427 * 334.64025 * 9 8 6 30 30 H 1.09007 * 109.47302 * 60.00216 * 1 2 3 31 31 H 1.09000 * 109.46938 * 179.97438 * 1 2 3 32 32 H 1.08992 * 109.47315 * 300.00121 * 1 2 3 33 33 H 1.08999 * 109.47381 * 240.00266 * 2 1 3 34 34 H 1.09007 * 109.47302 * 119.99783 * 2 1 3 35 35 H 1.09002 * 113.61567 * 25.41552 * 8 6 4 36 36 H 1.08999 * 113.67178 * 254.46080 * 8 6 4 37 37 H 1.08994 * 109.47226 * 164.13604 * 11 9 8 38 38 H 1.09005 * 109.46795 * 44.13515 * 11 9 8 39 39 H 1.09004 * 109.47407 * 314.72802 * 18 17 16 40 40 H 0.96708 * 114.00246 * 180.02562 * 19 18 17 41 41 H 1.48506 * 109.99834 * 300.00486 * 20 18 17 42 42 H 1.48502 * 110.00011 * 61.31751 * 20 18 17 43 43 H 1.08002 * 119.97374 * 180.25089 * 21 17 16 44 44 H 1.08005 * 119.93941 * 180.02562 * 22 21 17 45 45 H 1.07993 * 120.03118 * 179.97438 * 28 23 22 46 46 H 1.09000 * 113.61649 * 139.93861 * 29 9 8 47 47 H 1.08997 * 113.61354 * 270.84241 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3446 1.5448 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9375 0.0000 7 1 3.4714 3.5811 -0.7564 8 6 3.9848 3.5803 1.3975 9 6 5.3559 4.1431 0.9876 10 9 5.2848 5.3938 0.3646 11 6 6.3976 4.0955 2.1072 12 16 6.0573 5.4136 3.3061 13 8 4.8526 5.1476 4.0111 14 8 6.3018 6.6885 2.7283 15 8 7.1478 5.2619 4.3570 16 6 8.3683 5.7042 3.9549 17 6 8.7356 7.0238 4.1736 18 6 7.7813 7.9690 4.8569 19 8 7.7403 7.6762 6.2550 20 14 8.3578 9.7227 4.6063 21 6 9.9792 7.4697 3.7689 22 6 10.8549 6.6032 3.1416 23 6 10.4891 5.2886 2.9179 24 6 11.4464 4.3466 2.2342 25 9 12.6285 5.0275 1.9234 26 9 11.7351 3.2753 3.0863 27 9 10.8643 3.8628 1.0577 28 6 9.2471 4.8379 3.3205 29 6 5.4581 2.9682 0.0007 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8899 33 1 1.8933 -0.5138 -0.8900 34 1 1.8933 -0.5138 0.8900 35 1 4.0356 2.8551 2.2097 36 1 3.2287 4.3482 1.5611 37 1 7.3922 4.2369 1.6843 38 1 6.3495 3.1282 2.6073 39 1 6.7848 7.8498 4.4314 40 1 7.1443 8.2471 6.7591 41 1 9.7154 9.8982 5.1820 42 1 8.3743 10.0498 3.1578 43 1 10.2672 8.4960 3.9426 44 1 11.8267 6.9536 2.8264 45 1 8.9617 3.8112 3.1451 46 1 5.8898 3.2427 -0.9618 47 1 5.9125 2.0754 0.4303 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_15244782_16464788.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:35:40 Heat of formation + Delta-G solvation = -340.698787 kcal Electronic energy + Delta-G solvation = -44280.945688 eV Core-core repulsion = 37832.249177 eV Total energy + Delta-G solvation = -6448.696511 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 443.088 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -51.37695 -49.26022 -48.88975 -48.82558 -42.80382 -41.84538 -39.91609 -39.45217 -38.51514 -37.94527 -37.50225 -37.38425 -34.09259 -32.93672 -32.37184 -31.94715 -28.88985 -27.49621 -27.06071 -25.69259 -25.19078 -24.03587 -23.36859 -22.45140 -21.76214 -20.99075 -20.23726 -19.80333 -19.70084 -19.44120 -19.15756 -18.71056 -18.59329 -18.31865 -17.84548 -17.68892 -17.51402 -17.43128 -17.16175 -16.50204 -16.40520 -16.25705 -16.05138 -15.73763 -15.61302 -15.49380 -15.37510 -15.24882 -14.99922 -14.96480 -14.80980 -14.77300 -14.70839 -14.59966 -14.44377 -14.34163 -14.04609 -13.88364 -13.83084 -13.73543 -13.48382 -13.43868 -13.35676 -13.26385 -13.21232 -13.05787 -13.02487 -12.65000 -12.56468 -12.36118 -12.05325 -12.01625 -11.63149 -11.58646 -11.45186 -10.81522 -10.57952 -10.48191 -5.12586 -1.46606 -0.78793 -0.50707 0.63400 1.01268 1.06032 1.30650 1.49346 1.50549 1.65125 1.78503 2.13912 2.36303 2.44442 2.45755 2.58522 2.66858 2.78837 2.91444 2.97059 3.01216 3.05875 3.13531 3.32747 3.34569 3.48232 3.58621 3.68774 3.69447 3.83960 3.85717 3.90588 3.94176 4.08798 4.11513 4.15958 4.21739 4.24032 4.33625 4.36424 4.44404 4.49523 4.51834 4.59576 4.66348 4.76191 4.84013 4.97829 5.02737 5.36828 6.43305 6.62236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.475 3.525 5 O -0.502 6.502 6 C -0.108 4.108 7 H 0.139 0.861 8 C -0.148 4.148 9 C 0.103 3.897 10 F -0.168 7.168 11 C -0.677 4.677 12 S 2.587 3.413 13 O -0.904 6.904 14 O -0.931 6.931 15 O -0.646 6.646 16 C 0.088 3.912 17 C -0.006 4.006 18 C -0.102 4.102 19 O -0.538 6.538 20 Si 0.701 3.299 21 C -0.105 4.105 22 C -0.043 4.043 23 C -0.163 4.163 24 C 0.513 3.487 25 F -0.169 7.169 26 F -0.169 7.169 27 F -0.171 7.171 28 C -0.082 4.082 29 C -0.121 4.121 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.069 0.931 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.118 0.882 36 H 0.111 0.889 37 H 0.152 0.848 38 H 0.164 0.836 39 H 0.090 0.910 40 H 0.389 0.611 41 H -0.243 1.243 42 H -0.242 1.242 43 H 0.152 0.848 44 H 0.160 0.840 45 H 0.157 0.843 46 H 0.103 0.897 47 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.278 2.107 0.104 2.466 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.390 6.390 6 C -0.127 4.127 7 H 0.157 0.843 8 C -0.186 4.186 9 C 0.083 3.917 10 F -0.148 7.148 11 C -0.802 4.802 12 S 2.680 3.320 13 O -0.902 6.902 14 O -0.929 6.929 15 O -0.604 6.604 16 C 0.047 3.953 17 C -0.008 4.008 18 C -0.212 4.212 19 O -0.345 6.345 20 Si 0.599 3.401 21 C -0.123 4.123 22 C -0.062 4.062 23 C -0.165 4.165 24 C 0.459 3.541 25 F -0.150 7.150 26 F -0.150 7.150 27 F -0.152 7.152 28 C -0.103 4.103 29 C -0.159 4.159 30 H 0.087 0.913 31 H 0.101 0.899 32 H 0.088 0.912 33 H 0.090 0.910 34 H 0.090 0.910 35 H 0.136 0.864 36 H 0.130 0.870 37 H 0.170 0.830 38 H 0.182 0.818 39 H 0.108 0.892 40 H 0.237 0.763 41 H -0.167 1.167 42 H -0.166 1.166 43 H 0.169 0.831 44 H 0.177 0.823 45 H 0.175 0.825 46 H 0.121 0.879 47 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -0.418 2.290 0.034 2.328 hybrid contribution 0.140 -1.610 -0.681 1.753 sum -0.278 0.681 -0.647 0.979 Atomic orbital electron populations 1.21829 0.92169 1.03354 1.03788 1.23135 0.95762 0.79564 1.02857 1.86517 1.23961 1.33017 1.83467 1.23188 0.80935 0.91773 0.72342 1.90694 1.60538 1.42708 1.45012 1.22495 0.97140 0.92164 1.00897 0.84316 1.23866 0.95891 1.02031 0.96768 1.21165 0.95234 0.82367 0.92897 1.93016 1.96993 1.41405 1.83431 1.31397 1.09904 1.23597 1.15289 1.05909 0.74870 0.76361 0.74846 1.93693 1.41558 1.85899 1.69086 1.93666 1.83532 1.36694 1.79004 1.85783 1.28901 1.84557 1.61190 1.17484 0.83376 0.92300 1.02175 1.19761 0.94543 0.92012 0.94510 1.25054 1.01952 1.08917 0.85265 1.86490 1.69433 1.62553 1.16049 0.94464 0.83291 0.78364 0.83957 1.21060 0.91862 1.00920 0.98439 1.21244 1.00551 0.90907 0.93495 1.19800 0.95230 0.95543 1.05932 1.18005 0.79597 0.79488 0.77009 1.93215 1.49104 1.79488 1.93210 1.93271 1.93875 1.57567 1.70298 1.93260 1.84008 1.88843 1.49089 1.21043 0.92485 1.00521 0.96218 1.23589 0.93852 0.97632 1.00830 0.91299 0.89914 0.91242 0.90967 0.90961 0.86380 0.87048 0.83041 0.81828 0.89198 0.76263 1.16742 1.16564 0.83051 0.82266 0.82521 0.87874 0.85985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.15 0.38 0.66 16 2 C 0.06 -0.01 6.19 37.15 0.23 0.22 16 3 O -0.35 -0.44 10.22 -39.24 -0.40 -0.85 16 4 C 0.48 0.64 7.49 36.01 0.27 0.91 16 5 O -0.50 -1.88 15.65 -18.75 -0.29 -2.17 16 6 C -0.11 0.11 4.24 -90.86 -0.39 -0.28 16 7 H 0.14 -0.35 8.14 -51.93 -0.42 -0.77 16 8 C -0.15 0.16 6.76 -25.83 -0.17 -0.01 16 9 C 0.10 -0.07 1.56 -89.81 -0.14 -0.21 16 10 F -0.17 -0.21 16.58 2.25 0.04 -0.17 16 11 C -0.68 1.21 5.10 37.16 0.19 1.40 16 12 S 2.59 4.36 4.67 -107.50 -0.50 3.86 16 13 O -0.90 -3.54 17.84 -67.04 -1.20 -4.73 16 14 O -0.93 -3.04 13.83 -67.04 -0.93 -3.97 16 15 O -0.65 -1.24 9.48 -51.75 -0.49 -1.73 16 16 C 0.09 0.15 4.79 -39.22 -0.19 -0.04 16 17 C -0.01 -0.01 4.71 -104.48 -0.49 -0.50 16 18 C -0.10 -0.10 2.22 36.00 0.08 -0.02 16 19 O -0.54 -0.32 12.86 -35.23 -0.45 -0.78 16 20 Si 0.70 -0.99 30.20 -169.99 -5.13 -6.12 16 21 C -0.11 -0.01 8.66 -39.60 -0.34 -0.35 16 22 C -0.04 0.04 9.43 -39.56 -0.37 -0.33 16 23 C -0.16 0.07 5.37 -104.65 -0.56 -0.50 16 24 C 0.51 -0.08 3.32 36.01 0.12 0.04 16 25 F -0.17 -0.01 15.97 2.25 0.04 0.03 16 26 F -0.17 -0.11 17.24 2.25 0.04 -0.07 16 27 F -0.17 -0.03 17.24 2.25 0.04 0.01 16 28 C -0.08 0.03 8.01 -39.43 -0.32 -0.28 16 29 C -0.12 0.18 6.86 -25.92 -0.18 0.01 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 34 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 35 H 0.12 -0.24 8.01 -51.93 -0.42 -0.66 16 36 H 0.11 -0.18 8.14 -51.93 -0.42 -0.61 16 37 H 0.15 -0.56 6.58 -51.93 -0.34 -0.90 16 38 H 0.16 -0.78 8.09 -51.92 -0.42 -1.20 16 39 H 0.09 0.11 5.43 -51.93 -0.28 -0.17 16 40 H 0.39 -1.74 8.74 45.56 0.40 -1.34 16 41 H -0.24 0.07 6.75 56.52 0.38 0.45 16 42 H -0.24 -0.21 7.11 56.52 0.40 0.19 16 43 H 0.15 -0.21 4.90 -52.49 -0.26 -0.46 16 44 H 0.16 -0.54 7.15 -52.48 -0.38 -0.92 16 45 H 0.16 -0.54 7.47 -52.49 -0.39 -0.93 16 46 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 47 H 0.12 -0.22 7.39 -51.93 -0.38 -0.61 16 LS Contribution 419.49 15.07 6.32 6.32 Total: 0.00 -11.01 419.49 -9.87 -20.88 By element: Atomic # 1 Polarization: -6.16 SS G_CDS: -5.07 Total: -11.23 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -1.88 Total: 0.71 kcal Atomic # 8 Polarization: -10.46 SS G_CDS: -3.76 Total: -14.22 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.15 Total: -0.21 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.13 Total: -6.12 kcal Atomic # 16 Polarization: 4.36 SS G_CDS: -0.50 Total: 3.86 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -11.01 -9.87 -20.88 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15244782_16464788.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -319.818 kcal (2) G-P(sol) polarization free energy of solvation -11.008 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -330.826 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.873 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.881 kcal (6) G-S(sol) free energy of system = (1) + (5) -340.699 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds