Wall clock time and date at job start Mon Mar 8 2021 10:15:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45194 * 109.47339 * 2 1 4 4 C 1.34235 * 117.00385 * 179.97438 * 3 2 1 5 5 O 1.20824 * 119.99671 * 0.02562 * 4 3 2 6 6 C 1.50693 * 120.00281 * 180.02562 * 4 3 2 7 7 H 1.09001 * 112.84877 * 311.19605 * 6 4 3 8 8 C 1.53782 * 113.61565 * 82.50321 * 6 4 3 9 9 C 1.53782 * 87.08434 * 139.97959 * 8 6 4 10 10 F 1.39897 * 113.68859 * 89.12597 * 9 8 6 11 11 C 1.52998 * 113.61716 * 220.01974 * 9 8 6 12 12 N 1.46494 * 109.46991 * 277.49737 * 11 9 8 13 13 S 1.65606 * 119.99962 * 165.00013 * 12 11 9 14 14 O 1.42100 * 106.40369 * 178.54014 * 13 12 11 15 15 O 1.42099 * 106.40096 * 311.46343 * 13 12 11 16 16 C 1.76202 * 107.21725 * 64.99712 * 13 12 11 17 17 C 1.38232 * 120.00225 * 269.72909 * 16 13 12 18 18 C 1.38235 * 120.00187 * 179.80777 * 17 16 13 19 19 C 1.38237 * 119.99513 * 0.42247 * 18 17 16 20 20 C 1.50704 * 119.99921 * 179.78743 * 19 18 17 21 21 O 1.42897 * 109.47564 * 120.01854 * 20 19 18 22 22 Si 1.86304 * 109.46985 * 0.02562 * 20 19 18 23 23 C 1.38234 * 120.00480 * 359.80734 * 19 18 17 24 24 C 1.38233 * 119.99738 * 90.00233 * 16 13 12 25 25 C 1.53779 * 113.61415 * 179.97438 * 6 4 3 26 26 H 1.09002 * 109.47153 * 59.99705 * 1 2 3 27 27 H 1.09001 * 109.46832 * 299.99896 * 1 2 3 28 28 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47153 * 120.00295 * 2 1 3 30 30 H 1.08998 * 109.47533 * 239.99925 * 2 1 3 31 31 H 1.08994 * 113.61836 * 254.53120 * 8 6 4 32 32 H 1.09000 * 113.61339 * 25.43325 * 8 6 4 33 33 H 1.09000 * 109.47127 * 37.49907 * 11 9 8 34 34 H 1.08998 * 109.47000 * 157.49664 * 11 9 8 35 35 H 0.96996 * 120.00259 * 344.99528 * 12 11 9 36 36 H 1.07996 * 120.00205 * 0.02562 * 17 16 13 37 37 H 1.07998 * 120.00325 * 180.20421 * 18 17 16 38 38 H 1.08995 * 109.47391 * 240.02470 * 20 19 18 39 39 H 0.96705 * 113.99666 * 300.00840 * 21 20 19 40 40 H 1.48497 * 109.99924 * 179.97438 * 22 20 19 41 41 H 1.48501 * 109.99841 * 301.31984 * 22 20 19 42 42 H 1.08001 * 120.00209 * 179.97438 * 23 19 18 43 43 H 1.08003 * 120.00491 * 359.97438 * 24 16 13 44 44 H 1.08996 * 113.61833 * 334.56770 * 25 6 4 45 45 H 1.08998 * 113.61403 * 105.47181 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9373 0.0012 7 1 3.4715 3.5815 -0.7547 8 6 3.9859 3.5764 1.3984 9 6 5.3563 4.1421 0.9897 10 9 5.2851 5.3932 0.3677 11 6 6.3980 4.0934 2.1091 12 7 6.2193 5.2480 2.9930 13 16 6.9439 5.2710 4.4819 14 8 6.6113 6.5207 5.0708 15 8 6.6487 4.0216 5.0911 16 6 8.6853 5.2948 4.2141 17 6 9.3871 4.1072 4.1245 18 6 10.7527 4.1258 3.9105 19 6 11.4177 5.3322 3.7948 20 6 12.9072 5.3526 3.5662 21 8 13.1911 6.0198 2.3349 22 14 13.5473 3.6048 3.4872 23 6 10.7166 6.5198 3.8891 24 6 9.3505 6.5011 4.0993 25 6 5.4583 2.9680 0.0024 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8933 -0.5139 0.8900 30 1 1.8934 -0.5138 -0.8899 31 1 3.2288 4.3429 1.5636 32 1 4.0377 2.8496 2.2090 33 1 6.2732 3.1745 2.6820 34 1 7.3980 4.1187 1.6762 35 1 5.6766 5.9990 2.7061 36 1 8.8681 3.1648 4.2182 37 1 11.3005 3.1980 3.8371 38 1 13.3934 5.8809 4.3863 39 1 12.7891 5.6035 1.5602 40 1 15.0150 3.6112 3.2615 41 1 13.2301 2.8902 4.7497 42 1 11.2363 7.4623 3.7992 43 1 8.8028 7.4290 4.1733 44 1 5.9125 2.0749 0.4315 45 1 5.8902 3.2431 -0.9598 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_15509220_13421422.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:15:35 Heat of formation + Delta-G solvation = -179.935362 kcal Electronic energy + Delta-G solvation = -32053.802593 eV Core-core repulsion = 27273.695514 eV Total energy + Delta-G solvation = -4780.107078 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.112 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -49.00681 -41.78777 -40.79140 -39.45258 -38.32296 -37.82872 -37.51261 -36.93094 -36.05432 -33.11271 -32.75595 -32.30126 -29.59429 -27.35139 -27.28359 -26.19083 -24.20296 -23.86120 -23.09128 -22.09841 -21.05189 -20.54740 -19.35976 -19.18452 -18.60922 -18.30964 -17.95846 -17.63758 -17.41606 -17.16996 -16.91905 -16.55440 -16.27875 -16.18319 -15.93799 -15.76985 -15.51523 -15.27816 -14.96404 -14.88688 -14.62155 -14.49554 -14.27348 -14.04312 -13.93306 -13.78877 -13.76158 -13.38360 -13.17240 -13.10163 -13.05520 -12.98847 -12.73899 -12.67880 -12.55319 -12.47277 -12.01622 -11.94819 -11.89140 -11.66585 -11.56304 -11.37802 -10.85124 -10.72419 -10.41327 -10.24875 -5.19830 -0.80524 -0.44024 0.08786 1.07583 1.08945 1.48293 1.54932 1.75835 1.83136 2.24292 2.62280 2.74096 2.80655 2.98873 3.14217 3.20090 3.23053 3.26396 3.36608 3.65025 3.70116 3.74513 3.90848 3.93505 3.96154 4.01234 4.05772 4.17333 4.23645 4.25407 4.25681 4.29940 4.34982 4.43632 4.49294 4.60881 4.63150 4.68512 4.71170 4.77113 4.83816 4.88526 4.98755 4.99717 5.14410 5.40838 5.59089 5.69987 6.35325 6.67263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.474 3.526 5 O -0.503 6.503 6 C -0.110 4.110 7 H 0.134 0.866 8 C -0.137 4.137 9 C 0.091 3.909 10 F -0.178 7.178 11 C 0.109 3.891 12 N -1.115 6.115 13 S 2.697 3.303 14 O -0.951 6.951 15 O -0.951 6.951 16 C -0.676 4.676 17 C -0.017 4.017 18 C -0.139 4.139 19 C -0.062 4.062 20 C -0.078 4.078 21 O -0.535 6.535 22 Si 0.691 3.309 23 C -0.113 4.113 24 C -0.015 4.015 25 C -0.131 4.131 26 H 0.067 0.933 27 H 0.068 0.932 28 H 0.082 0.918 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.100 0.900 32 H 0.111 0.889 33 H 0.104 0.896 34 H 0.084 0.916 35 H 0.424 0.576 36 H 0.146 0.854 37 H 0.138 0.862 38 H 0.120 0.880 39 H 0.381 0.619 40 H -0.251 1.251 41 H -0.255 1.255 42 H 0.138 0.862 43 H 0.144 0.856 44 H 0.121 0.879 45 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.108 -2.165 -4.694 5.286 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.316 3.684 5 O -0.390 6.390 6 C -0.129 4.129 7 H 0.151 0.849 8 C -0.175 4.175 9 C 0.071 3.929 10 F -0.158 7.158 11 C -0.018 4.018 12 N -0.876 5.876 13 S 2.786 3.214 14 O -0.941 6.941 15 O -0.940 6.940 16 C -0.763 4.763 17 C -0.036 4.036 18 C -0.157 4.157 19 C -0.063 4.063 20 C -0.189 4.189 21 O -0.340 6.340 22 Si 0.592 3.408 23 C -0.132 4.132 24 C -0.034 4.034 25 C -0.169 4.169 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.100 0.900 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.119 0.881 32 H 0.130 0.870 33 H 0.122 0.878 34 H 0.103 0.897 35 H 0.260 0.740 36 H 0.164 0.836 37 H 0.155 0.845 38 H 0.138 0.862 39 H 0.228 0.772 40 H -0.176 1.176 41 H -0.180 1.180 42 H 0.156 0.844 43 H 0.162 0.838 44 H 0.139 0.861 45 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -0.350 -2.817 -3.089 4.195 hybrid contribution 0.274 0.850 -0.307 0.944 sum -0.076 -1.967 -3.395 3.925 Atomic orbital electron populations 1.21828 0.92274 1.03318 1.03711 1.23110 0.95673 0.79676 1.02825 1.86516 1.24181 1.32913 1.83563 1.23304 0.80822 0.91982 0.72270 1.90690 1.60519 1.42783 1.45030 1.22498 0.97166 0.91824 1.01429 0.84850 1.23635 0.96821 1.01224 0.95807 1.21815 0.96999 0.80925 0.93146 1.92900 1.97128 1.42323 1.83469 1.21791 0.99306 0.89668 0.91047 1.55444 1.66293 1.28666 1.37160 1.01891 0.73436 0.73823 0.72240 1.93630 1.82974 1.43629 1.73856 1.93614 1.83122 1.44207 1.73100 1.30972 1.26721 0.99653 1.18953 1.20920 0.94361 0.96881 0.91422 1.21174 0.94885 0.97347 1.02319 1.20765 0.96564 0.93822 0.95142 1.25237 0.93184 1.10481 0.89962 1.86540 1.76025 1.56152 1.15332 0.94703 0.81880 0.76397 0.87773 1.21198 0.93944 0.98495 0.99594 1.21016 0.94934 0.96583 0.90901 1.23609 0.93801 0.98377 1.01122 0.91349 0.91313 0.89953 0.90987 0.91020 0.88122 0.87047 0.87755 0.89747 0.73963 0.83636 0.84516 0.86229 0.77179 1.17570 1.17980 0.84431 0.83823 0.86108 0.88285 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.33 10.29 37.16 0.38 0.71 16 2 C 0.06 -0.03 6.19 37.16 0.23 0.20 16 3 O -0.35 -0.27 10.22 -39.27 -0.40 -0.67 16 4 C 0.47 0.29 7.48 36.00 0.27 0.56 16 5 O -0.50 -1.56 15.65 -18.75 -0.29 -1.85 16 6 C -0.11 0.24 4.24 -90.96 -0.39 -0.14 16 7 H 0.13 -0.43 8.14 -51.93 -0.42 -0.85 16 8 C -0.14 0.40 7.08 -25.92 -0.18 0.22 16 9 C 0.09 -0.27 1.73 -89.83 -0.16 -0.43 16 10 F -0.18 0.23 16.64 2.25 0.04 0.27 16 11 C 0.11 -0.38 5.91 -4.05 -0.02 -0.41 16 12 N -1.11 2.64 5.96 -10.62 -0.06 2.58 16 13 S 2.70 0.86 5.74 -107.50 -0.62 0.24 16 14 O -0.95 -3.30 17.28 -57.17 -0.99 -4.29 16 15 O -0.95 -2.61 16.75 -57.17 -0.96 -3.57 16 16 C -0.68 0.18 5.95 -39.59 -0.24 -0.05 16 17 C -0.02 0.02 9.52 -39.58 -0.38 -0.36 16 18 C -0.14 0.22 8.67 -39.58 -0.34 -0.13 16 19 C -0.06 0.06 5.39 -104.62 -0.56 -0.50 16 20 C -0.08 0.11 2.82 36.01 0.10 0.21 16 21 O -0.54 0.59 12.77 -35.23 -0.45 0.14 16 22 Si 0.69 -1.49 29.79 -169.99 -5.06 -6.56 16 23 C -0.11 0.05 9.61 -39.58 -0.38 -0.33 16 24 C -0.02 0.00 9.52 -39.58 -0.38 -0.37 16 25 C -0.13 0.41 6.86 -25.94 -0.18 0.23 16 26 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 29 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.07 -0.03 8.13 -51.93 -0.42 -0.46 16 31 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 32 H 0.11 -0.35 7.91 -51.93 -0.41 -0.76 16 33 H 0.10 -0.45 7.55 -51.93 -0.39 -0.84 16 34 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 35 H 0.42 -1.33 8.19 -34.47 -0.28 -1.62 16 36 H 0.15 -0.42 7.61 -52.49 -0.40 -0.82 16 37 H 0.14 -0.50 4.88 -52.49 -0.26 -0.75 16 38 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 39 H 0.38 -1.92 8.70 45.56 0.40 -1.53 16 40 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 41 H -0.26 -0.06 7.11 56.52 0.40 0.34 16 42 H 0.14 -0.17 8.06 -52.49 -0.42 -0.59 16 43 H 0.14 -0.17 7.62 -52.48 -0.40 -0.57 16 44 H 0.12 -0.39 7.39 -51.93 -0.38 -0.77 16 45 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 LS Contribution 395.41 15.07 5.96 5.96 Total: 0.00 -11.68 395.41 -11.02 -22.70 By element: Atomic # 1 Polarization: -8.38 SS G_CDS: -5.97 Total: -14.35 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -2.22 Total: -0.60 kcal Atomic # 7 Polarization: 2.64 SS G_CDS: -0.06 Total: 2.58 kcal Atomic # 8 Polarization: -7.15 SS G_CDS: -3.09 Total: -10.24 kcal Atomic # 9 Polarization: 0.23 SS G_CDS: 0.04 Total: 0.27 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.06 Total: -6.56 kcal Atomic # 16 Polarization: 0.86 SS G_CDS: -0.62 Total: 0.24 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -11.68 -11.02 -22.70 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15509220_13421422.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -157.235 kcal (2) G-P(sol) polarization free energy of solvation -11.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.700 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.935 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds