Wall clock time and date at job start Mon Mar 8 2021 10:15:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45200 * 109.47135 * 2 1 4 4 C 1.34223 * 116.99863 * 180.02562 * 3 2 1 5 5 O 1.20829 * 120.00076 * 359.97438 * 4 3 2 6 6 C 1.50700 * 120.00177 * 179.97438 * 4 3 2 7 7 H 1.08995 * 112.85034 * 311.19847 * 6 4 3 8 8 C 1.53957 * 113.74218 * 82.39966 * 6 4 3 9 9 C 1.53774 * 87.02054 * 139.94718 * 8 6 4 10 10 F 1.39903 * 113.61680 * 89.22817 * 9 8 6 11 11 C 1.53002 * 113.61622 * 220.04601 * 9 8 6 12 12 N 1.46492 * 109.47381 * 279.13599 * 11 9 8 13 13 S 1.65608 * 119.99899 * 164.99702 * 12 11 9 14 14 O 1.42098 * 106.39975 * 311.46113 * 13 12 11 15 15 O 1.42103 * 106.40054 * 178.54011 * 13 12 11 16 16 C 1.76198 * 107.21737 * 65.00389 * 13 12 11 17 17 C 1.33383 * 125.20393 * 89.99625 * 16 13 12 18 18 C 1.50703 * 122.54063 * 0.06171 * 17 16 13 19 19 O 1.42896 * 109.47217 * 74.99859 * 18 17 16 20 20 Si 1.86299 * 109.46914 * 195.00057 * 18 17 16 21 21 C 1.38425 * 114.92174 * 180.02562 * 17 16 13 22 22 C 1.33390 * 114.92123 * 359.97438 * 21 17 16 23 23 S 1.75887 * 125.19968 * 270.04013 * 16 13 12 24 24 C 1.53777 * 87.17486 * 334.63872 * 9 8 6 25 25 H 1.09001 * 109.47006 * 299.99774 * 1 2 3 26 26 H 1.09004 * 109.47239 * 59.99933 * 1 2 3 27 27 H 1.09008 * 109.47476 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.46848 * 239.99741 * 2 1 3 29 29 H 1.08996 * 109.47310 * 120.00345 * 2 1 3 30 30 H 1.09001 * 113.61267 * 25.42735 * 8 6 4 31 31 H 1.08998 * 113.66881 * 254.47655 * 8 6 4 32 32 H 1.09008 * 109.47027 * 159.13166 * 11 9 8 33 33 H 1.09002 * 109.46667 * 39.13923 * 11 9 8 34 34 H 0.97000 * 120.00274 * 345.00417 * 12 11 9 35 35 H 1.08997 * 109.46714 * 314.99600 * 18 17 16 36 36 H 0.96697 * 113.99932 * 180.02562 * 19 18 17 37 37 H 1.48505 * 109.99871 * 178.68029 * 20 18 17 38 38 H 1.48506 * 109.99815 * 299.99396 * 20 18 17 39 39 H 1.07997 * 122.54292 * 179.73691 * 21 17 16 40 40 H 1.08003 * 125.20243 * 179.97438 * 22 21 17 41 41 H 1.09003 * 113.61892 * 139.93504 * 24 9 8 42 42 H 1.08997 * 113.61755 * 270.76030 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9207 2.9373 -0.0012 7 1 3.4709 3.5811 -0.7569 8 6 3.9860 3.5818 1.3955 9 6 5.3567 4.1441 0.9839 10 9 5.2852 5.3940 0.3594 11 6 6.3993 4.0979 2.1028 12 7 6.1981 5.2343 3.0051 13 16 6.9221 5.2474 4.4944 14 8 6.6513 3.9829 5.0833 15 8 6.5652 6.4808 5.1032 16 6 8.6626 5.3096 4.2276 17 6 9.3846 6.4259 4.1198 18 6 8.7729 7.7997 4.2186 19 8 8.4637 8.0864 5.5840 20 14 9.9803 9.0647 3.5764 21 6 10.7385 6.2271 3.9111 22 6 11.1161 4.9492 3.8499 23 16 9.7136 3.9090 4.0617 24 6 5.4582 2.9680 -0.0016 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 1.8933 -0.5139 -0.8900 29 1 1.8933 -0.5139 0.8899 30 1 4.0374 2.8576 2.2086 31 1 3.2300 4.3499 1.5587 32 1 7.3987 4.1495 1.6706 33 1 6.2924 3.1676 2.6607 34 1 5.6407 5.9791 2.7302 35 1 7.8599 7.8344 3.6243 36 1 8.0655 8.9566 5.7227 37 1 9.3770 10.4203 3.6388 38 1 11.2296 9.0275 4.3785 39 1 11.4358 7.0446 3.8020 40 1 12.1280 4.6058 3.6931 41 1 5.8891 3.2414 -0.9648 42 1 5.9142 2.0762 0.4282 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_15509220_13652106.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:15:39 Heat of formation + Delta-G solvation = -164.027664 kcal Electronic energy + Delta-G solvation = -31192.700782 eV Core-core repulsion = 26502.435760 eV Total energy + Delta-G solvation = -4690.265022 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.069 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -48.98553 -41.76358 -39.97369 -39.42300 -38.13215 -37.49427 -37.12793 -36.79655 -36.02792 -32.74261 -31.49918 -29.56857 -28.02178 -27.28503 -26.16967 -24.18584 -23.85683 -22.12409 -21.55324 -20.87354 -19.95754 -19.42492 -19.08153 -18.61642 -18.37101 -17.95142 -17.63063 -17.39515 -17.17150 -17.05952 -16.28351 -16.18649 -15.90775 -15.68322 -15.52356 -15.30910 -14.88864 -14.60948 -14.59779 -14.28599 -14.19905 -14.17713 -13.77445 -13.75119 -13.62572 -13.31283 -13.04654 -13.03431 -12.97339 -12.94901 -12.65746 -12.63825 -12.53995 -12.48531 -12.36492 -11.92106 -11.66522 -11.59712 -11.54817 -11.35965 -10.80716 -10.49385 -10.39863 -9.65579 -5.05325 -0.83642 -0.54665 0.29004 0.63326 1.09326 1.16274 1.19063 1.53345 1.56861 1.87867 1.91214 2.63768 2.76003 2.82943 3.02021 3.16018 3.23014 3.27541 3.52907 3.76328 3.80976 3.89217 3.92360 3.95355 3.97588 4.03473 4.11402 4.23694 4.24523 4.26809 4.31444 4.37069 4.45148 4.62542 4.65378 4.65757 4.69852 4.78306 4.87843 4.99855 5.01916 5.03099 5.42392 5.72573 6.52800 6.69116 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.355 6.355 4 C 0.474 3.526 5 O -0.503 6.503 6 C -0.110 4.110 7 H 0.134 0.866 8 C -0.137 4.137 9 C 0.092 3.908 10 F -0.178 7.178 11 C 0.107 3.893 12 N -1.114 6.114 13 S 2.715 3.285 14 O -0.949 6.949 15 O -0.925 6.925 16 C -0.781 4.781 17 C 0.058 3.942 18 C -0.078 4.078 19 O -0.510 6.510 20 Si 0.688 3.312 21 C -0.164 4.164 22 C -0.162 4.162 23 S 0.224 5.776 24 C -0.131 4.131 25 H 0.068 0.932 26 H 0.067 0.933 27 H 0.082 0.918 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.111 0.889 31 H 0.101 0.899 32 H 0.085 0.915 33 H 0.104 0.896 34 H 0.424 0.576 35 H 0.081 0.919 36 H 0.384 0.616 37 H -0.255 1.255 38 H -0.251 1.251 39 H 0.155 0.845 40 H 0.180 0.820 41 H 0.099 0.901 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.522 0.211 -5.802 5.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.316 3.684 5 O -0.390 6.390 6 C -0.129 4.129 7 H 0.152 0.848 8 C -0.175 4.175 9 C 0.072 3.928 10 F -0.158 7.158 11 C -0.020 4.020 12 N -0.876 5.876 13 S 2.800 3.200 14 O -0.939 6.939 15 O -0.915 6.915 16 C -0.982 4.982 17 C 0.040 3.960 18 C -0.189 4.189 19 O -0.317 6.317 20 Si 0.587 3.413 21 C -0.193 4.193 22 C -0.300 4.300 23 S 0.491 5.509 24 C -0.169 4.169 25 H 0.087 0.913 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.129 0.871 31 H 0.119 0.881 32 H 0.103 0.897 33 H 0.122 0.878 34 H 0.260 0.740 35 H 0.099 0.901 36 H 0.233 0.767 37 H -0.179 1.179 38 H -0.176 1.176 39 H 0.173 0.827 40 H 0.197 0.803 41 H 0.118 0.882 42 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 0.943 -1.769 -4.659 5.073 hybrid contribution -0.009 2.164 0.216 2.175 sum 0.935 0.395 -4.443 4.558 Atomic orbital electron populations 1.21828 0.92278 1.03312 1.03702 1.23111 0.95667 0.79689 1.02834 1.86514 1.24181 1.32902 1.83574 1.23302 0.80821 0.91987 0.72291 1.90694 1.60518 1.42779 1.44995 1.22526 0.97143 0.91797 1.01419 0.84836 1.23663 0.96778 1.01215 0.95845 1.21814 0.96937 0.80977 0.93063 1.92899 1.97127 1.42415 1.83355 1.21811 0.99290 0.90163 0.90764 1.55530 1.64971 1.30178 1.36892 1.01494 0.72164 0.74192 0.72113 1.93621 1.83215 1.43318 1.73758 1.93666 1.81436 1.44057 1.72345 1.35716 1.30444 1.03522 1.28482 1.18048 0.92721 0.93100 0.92082 1.24712 1.06085 0.99047 0.89104 1.86607 1.83297 1.39958 1.21848 0.95278 0.78664 0.77610 0.89720 1.20294 0.95273 0.97871 1.05903 1.26199 1.03851 0.96925 1.02986 1.84306 0.95518 1.04670 1.66374 1.23611 0.93794 0.98368 1.01149 0.91317 0.91352 0.89959 0.91017 0.90984 0.87077 0.88091 0.89690 0.87834 0.74020 0.90140 0.76748 1.17928 1.17564 0.82749 0.80287 0.88224 0.86117 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.29 10.29 37.16 0.38 0.67 16 2 C 0.06 -0.01 6.19 37.16 0.23 0.22 16 3 O -0.35 -0.37 10.22 -39.24 -0.40 -0.77 16 4 C 0.47 0.47 7.49 36.01 0.27 0.74 16 5 O -0.50 -1.79 15.65 -18.75 -0.29 -2.08 16 6 C -0.11 0.20 4.23 -90.87 -0.38 -0.18 16 7 H 0.13 -0.41 8.14 -51.93 -0.42 -0.83 16 8 C -0.14 0.34 7.09 -25.83 -0.18 0.16 16 9 C 0.09 -0.23 1.71 -89.81 -0.15 -0.39 16 10 F -0.18 0.22 16.70 2.25 0.04 0.26 16 11 C 0.11 -0.26 5.89 -4.05 -0.02 -0.29 16 12 N -1.11 1.60 5.96 -10.61 -0.06 1.53 16 13 S 2.72 5.49 5.67 -107.50 -0.61 4.88 16 14 O -0.95 -4.49 17.38 -57.17 -0.99 -5.48 16 15 O -0.93 -3.85 14.29 -66.03 -0.94 -4.80 16 16 C -0.78 -1.15 6.54 29.04 0.19 -0.96 16 17 C 0.06 0.07 5.17 -106.25 -0.55 -0.48 16 18 C -0.08 -0.05 1.78 36.01 0.06 0.02 16 19 O -0.51 -1.35 11.10 -56.64 -0.63 -1.98 16 20 Si 0.69 -0.81 30.42 -169.99 -5.17 -5.98 16 21 C -0.16 0.06 8.75 -41.21 -0.36 -0.30 16 22 C -0.16 0.22 11.23 29.04 0.33 0.55 16 23 S 0.22 -0.01 23.22 -107.50 -2.50 -2.50 16 24 C -0.13 0.35 6.86 -25.92 -0.18 0.17 16 25 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.08 -0.25 8.14 -51.92 -0.42 -0.68 16 28 H 0.07 -0.01 8.13 -51.93 -0.42 -0.44 16 29 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 30 H 0.11 -0.28 7.94 -51.93 -0.41 -0.69 16 31 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 32 H 0.08 -0.35 8.14 -51.92 -0.42 -0.77 16 33 H 0.10 -0.29 7.59 -51.93 -0.39 -0.68 16 34 H 0.42 -1.19 8.24 -34.48 -0.28 -1.47 16 35 H 0.08 -0.08 7.16 -51.93 -0.37 -0.45 16 36 H 0.38 -0.36 8.74 45.56 0.40 0.04 16 37 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 38 H -0.25 -0.32 6.87 56.52 0.39 0.07 16 39 H 0.16 -0.30 5.57 -52.49 -0.29 -0.59 16 40 H 0.18 -0.76 8.06 -52.48 -0.42 -1.18 16 41 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 42 H 0.12 -0.30 7.40 -51.93 -0.38 -0.69 16 LS Contribution 381.76 15.07 5.75 5.75 Total: 0.00 -11.11 381.76 -11.36 -22.47 By element: Atomic # 1 Polarization: -6.03 SS G_CDS: -5.18 Total: -11.20 kcal Atomic # 6 Polarization: 0.29 SS G_CDS: -0.37 Total: -0.08 kcal Atomic # 7 Polarization: 1.60 SS G_CDS: -0.06 Total: 1.53 kcal Atomic # 8 Polarization: -11.86 SS G_CDS: -3.26 Total: -15.12 kcal Atomic # 9 Polarization: 0.22 SS G_CDS: 0.04 Total: 0.26 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.17 Total: -5.98 kcal Atomic # 16 Polarization: 5.48 SS G_CDS: -3.10 Total: 2.37 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -11.11 -11.36 -22.47 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15509220_13652106.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.560 kcal (2) G-P(sol) polarization free energy of solvation -11.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.671 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.357 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.468 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds