Wall clock time and date at job start Mon Mar 8 2021 10:15:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45200 * 109.46969 * 2 1 4 4 C 1.34234 * 116.99347 * 180.02562 * 3 2 1 5 5 O 1.20823 * 120.00172 * 0.02562 * 4 3 2 6 6 C 1.50701 * 119.99503 * 179.97438 * 4 3 2 7 7 H 1.08995 * 112.84994 * 311.19603 * 6 4 3 8 8 C 1.53786 * 113.61283 * 82.50555 * 6 4 3 9 9 C 1.53782 * 87.07888 * 139.97694 * 8 6 4 10 10 F 1.39901 * 113.68956 * 89.12864 * 9 8 6 11 11 C 1.52996 * 113.61093 * 220.01404 * 9 8 6 12 12 N 1.46500 * 109.47548 * 277.49950 * 11 9 8 13 13 S 1.65598 * 120.00255 * 165.49846 * 12 11 9 14 14 O 1.42105 * 106.40366 * 178.45776 * 13 12 11 15 15 O 1.42103 * 106.40182 * 311.37627 * 13 12 11 16 16 C 1.76199 * 107.21849 * 64.91697 * 13 12 11 17 17 C 1.33390 * 122.53857 * 66.77626 * 16 13 12 18 18 C 1.50700 * 125.20532 * 0.02771 * 17 16 13 19 19 O 1.42902 * 109.46684 * 313.37927 * 18 17 16 20 20 Si 1.86294 * 109.47010 * 193.38255 * 18 17 16 21 21 S 1.75885 * 109.59032 * 179.90588 * 17 16 13 22 22 C 1.75888 * 90.97134 * 0.29898 * 21 17 16 23 23 C 1.33381 * 109.59328 * 359.83149 * 22 21 17 24 24 C 1.53770 * 87.08176 * 334.56667 * 9 8 6 25 25 H 1.09009 * 109.46857 * 299.99864 * 1 2 3 26 26 H 1.08999 * 109.47442 * 59.99372 * 1 2 3 27 27 H 1.09000 * 109.47308 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.46432 * 239.99990 * 2 1 3 29 29 H 1.08999 * 109.46917 * 120.00593 * 2 1 3 30 30 H 1.08996 * 113.61501 * 25.42859 * 8 6 4 31 31 H 1.09001 * 113.60787 * 254.52783 * 8 6 4 32 32 H 1.09001 * 109.47435 * 157.50111 * 11 9 8 33 33 H 1.08999 * 109.47236 * 37.50368 * 11 9 8 34 34 H 0.97007 * 120.00149 * 345.49796 * 12 11 9 35 35 H 1.08999 * 109.46776 * 73.37957 * 18 17 16 36 36 H 0.96695 * 114.00224 * 301.44117 * 19 18 17 37 37 H 1.48499 * 110.00512 * 58.68028 * 20 18 17 38 38 H 1.48506 * 109.99878 * 179.97438 * 20 18 17 39 39 H 1.07997 * 125.19931 * 179.85772 * 22 21 17 40 40 H 1.08000 * 122.54176 * 179.97438 * 23 22 21 41 41 H 1.09001 * 113.61369 * 139.98496 * 24 9 8 42 42 H 1.09007 * 113.61586 * 270.79485 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5447 -0.0005 5 8 4.0807 0.5865 -0.0015 6 6 3.9208 2.9373 -0.0012 7 1 3.4710 3.5811 -0.7570 8 6 3.9869 3.5772 1.3957 9 6 5.3570 4.1425 0.9856 10 9 5.2854 5.3934 0.3630 11 6 6.3995 4.0946 2.1044 12 7 6.2214 5.2496 2.9877 13 16 6.9571 5.2789 4.4710 14 8 6.6241 6.5287 5.0596 15 8 6.6713 4.0298 5.0854 16 6 8.6963 5.3089 4.1901 17 6 9.3144 6.3484 3.6274 18 6 8.6393 7.6131 3.1627 19 8 7.4723 7.2803 2.4080 20 14 9.8135 8.5870 2.0936 21 16 11.0383 6.0186 3.5137 22 6 10.8148 4.4373 4.2506 23 6 9.5240 4.2531 4.5315 24 6 5.4583 2.9680 -0.0016 25 1 -0.3633 0.5139 0.8901 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3634 -1.0277 0.0005 28 1 1.8932 -0.5139 -0.8900 29 1 1.8933 -0.5139 0.8899 30 1 4.0393 2.8508 2.2067 31 1 3.2299 4.3438 1.5609 32 1 7.3992 4.1195 1.6708 33 1 6.2750 3.1760 2.6778 34 1 5.6726 5.9974 2.7038 35 1 8.3541 8.2116 4.0279 36 1 7.6487 6.7286 1.6338 37 1 10.2348 7.7702 0.9271 38 1 9.1594 9.8364 1.6284 39 1 11.6024 3.7247 4.4461 40 1 9.1525 3.3486 4.9901 41 1 5.8892 3.2427 -0.9644 42 1 5.9143 2.0754 0.4269 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_15509220_14772022.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:15:42 Heat of formation + Delta-G solvation = -163.711365 kcal Electronic energy + Delta-G solvation = -31812.502309 eV Core-core repulsion = 27122.251002 eV Total energy + Delta-G solvation = -4690.251307 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.069 amu Computer time = 1.96 seconds Orbital eigenvalues (eV) -48.99102 -41.77455 -39.78545 -39.41382 -38.28592 -37.65407 -37.43563 -36.74707 -35.86210 -32.74633 -31.89340 -29.51935 -27.57171 -27.27851 -26.14347 -24.45967 -23.84586 -22.08289 -21.80355 -20.91014 -20.03105 -19.44721 -19.12695 -18.61536 -18.30690 -17.75636 -17.52084 -17.34513 -17.07205 -17.04186 -16.58953 -16.22969 -16.04515 -15.64499 -15.53343 -15.26797 -15.18188 -14.82284 -14.60409 -14.23602 -14.21386 -14.07426 -13.95444 -13.77645 -13.73623 -13.23437 -13.06062 -13.04425 -12.98060 -12.92977 -12.85114 -12.66472 -12.61189 -12.53944 -12.28127 -11.90028 -11.70272 -11.59512 -11.55475 -11.35120 -11.14525 -10.60597 -10.21510 -9.84848 -5.25395 -0.69386 -0.51238 0.28478 0.56082 0.97579 1.07640 1.08958 1.41032 1.56431 1.74875 2.00197 2.70759 2.77143 2.82856 3.02031 3.03109 3.16409 3.22289 3.27939 3.52822 3.76897 3.92005 3.96265 3.97362 3.98688 4.05850 4.16988 4.26148 4.26472 4.30432 4.36773 4.37662 4.47728 4.61447 4.64146 4.69157 4.72803 4.77797 4.85824 4.99418 5.02142 5.07593 5.41673 5.93618 6.03947 6.68350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.355 6.355 4 C 0.474 3.526 5 O -0.503 6.503 6 C -0.110 4.110 7 H 0.133 0.867 8 C -0.136 4.136 9 C 0.092 3.908 10 F -0.178 7.178 11 C 0.109 3.891 12 N -1.104 6.104 13 S 2.718 3.282 14 O -0.943 6.943 15 O -0.958 6.958 16 C -0.669 4.669 17 C -0.099 4.099 18 C -0.069 4.069 19 O -0.516 6.516 20 Si 0.672 3.328 21 S 0.160 5.840 22 C -0.211 4.211 23 C -0.077 4.077 24 C -0.132 4.132 25 H 0.068 0.932 26 H 0.067 0.933 27 H 0.082 0.918 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.111 0.889 31 H 0.100 0.900 32 H 0.079 0.921 33 H 0.103 0.897 34 H 0.429 0.571 35 H 0.152 0.848 36 H 0.380 0.620 37 H -0.241 1.241 38 H -0.229 1.229 39 H 0.176 0.824 40 H 0.159 0.841 41 H 0.097 0.903 42 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.401 -0.202 -2.821 3.710 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.316 3.684 5 O -0.390 6.390 6 C -0.129 4.129 7 H 0.151 0.849 8 C -0.174 4.174 9 C 0.072 3.928 10 F -0.158 7.158 11 C -0.018 4.018 12 N -0.868 5.868 13 S 2.804 3.196 14 O -0.933 6.933 15 O -0.948 6.948 16 C -0.769 4.769 17 C -0.220 4.220 18 C -0.180 4.180 19 O -0.324 6.324 20 Si 0.568 3.432 21 S 0.424 5.576 22 C -0.346 4.346 23 C -0.105 4.105 24 C -0.170 4.170 25 H 0.087 0.913 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.129 0.871 31 H 0.119 0.881 32 H 0.097 0.903 33 H 0.121 0.879 34 H 0.267 0.733 35 H 0.170 0.830 36 H 0.230 0.770 37 H -0.164 1.164 38 H -0.151 1.151 39 H 0.193 0.807 40 H 0.176 0.824 41 H 0.116 0.884 42 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 3.464 0.833 -2.860 4.568 hybrid contribution -1.328 -1.444 -0.632 2.061 sum 2.136 -0.611 -3.492 4.139 Atomic orbital electron populations 1.21828 0.92266 1.03312 1.03713 1.23112 0.95679 0.79689 1.02819 1.86519 1.24171 1.32898 1.83569 1.23312 0.80822 0.91993 0.72262 1.90690 1.60526 1.42791 1.45036 1.22499 0.97103 0.91803 1.01492 0.84891 1.23619 0.96836 1.01195 0.95716 1.21822 0.97105 0.80821 0.93082 1.92898 1.97138 1.42336 1.83435 1.21739 0.98757 0.90160 0.91141 1.55521 1.65689 1.28348 1.37268 1.01358 0.72654 0.73528 0.72067 1.93607 1.82428 1.43450 1.73852 1.93589 1.83192 1.44758 1.73270 1.29941 1.28522 1.01760 1.16673 1.25050 0.98334 0.98891 0.99720 1.25013 0.94063 0.95810 1.03149 1.86677 1.29756 1.73144 1.42798 0.95062 0.83811 0.81661 0.82644 1.84290 1.03735 1.12592 1.57014 1.25940 1.00743 1.00318 1.07625 1.19772 0.91925 0.98702 1.00119 1.23614 0.93831 0.98486 1.01066 0.91307 0.91352 0.89954 0.91038 0.90983 0.87076 0.88103 0.90322 0.87890 0.73264 0.83028 0.77013 1.16425 1.15135 0.80683 0.82387 0.88434 0.86186 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.35 -0.45 10.22 -39.27 -0.40 -0.85 16 4 C 0.47 0.58 7.48 36.01 0.27 0.85 16 5 O -0.50 -1.90 15.65 -18.75 -0.29 -2.19 16 6 C -0.11 0.17 4.24 -90.96 -0.39 -0.21 16 7 H 0.13 -0.35 8.14 -51.93 -0.42 -0.78 16 8 C -0.14 0.31 7.08 -25.92 -0.18 0.12 16 9 C 0.09 -0.23 1.73 -89.81 -0.16 -0.39 16 10 F -0.18 0.22 16.64 2.25 0.04 0.25 16 11 C 0.11 -0.30 5.91 -4.04 -0.02 -0.32 16 12 N -1.10 1.42 3.90 -10.61 -0.04 1.38 16 13 S 2.72 4.63 4.94 -107.50 -0.53 4.09 16 14 O -0.94 -4.41 16.66 -60.79 -1.01 -5.43 16 15 O -0.96 -3.99 16.82 -57.17 -0.96 -4.95 16 16 C -0.67 -0.34 5.77 -41.21 -0.24 -0.57 16 17 C -0.10 0.05 5.73 -36.00 -0.21 -0.16 16 18 C -0.07 0.07 2.07 36.01 0.07 0.14 16 19 O -0.52 0.55 8.64 -39.09 -0.34 0.21 16 20 Si 0.67 -1.33 31.08 -169.99 -5.28 -6.61 16 21 S 0.16 -0.26 20.70 -107.50 -2.23 -2.49 16 22 C -0.21 0.27 11.23 29.03 0.33 0.59 16 23 C -0.08 0.00 9.69 -41.21 -0.40 -0.40 16 24 C -0.13 0.32 6.86 -25.93 -0.18 0.15 16 25 H 0.07 -0.11 8.14 -51.92 -0.42 -0.53 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 27 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 28 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 29 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 30 H 0.11 -0.26 7.91 -51.93 -0.41 -0.67 16 31 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 32 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 33 H 0.10 -0.30 7.56 -51.93 -0.39 -0.70 16 34 H 0.43 -0.71 7.11 -34.47 -0.24 -0.96 16 35 H 0.15 -0.12 7.74 -51.93 -0.40 -0.52 16 36 H 0.38 -1.37 8.35 45.56 0.38 -0.99 16 37 H -0.24 0.14 7.11 56.52 0.40 0.54 16 38 H -0.23 -0.15 7.11 56.52 0.40 0.25 16 39 H 0.18 -0.60 8.06 -52.49 -0.42 -1.03 16 40 H 0.16 -0.10 7.74 -52.49 -0.41 -0.51 16 41 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 42 H 0.12 -0.27 7.40 -51.92 -0.38 -0.65 16 LS Contribution 378.87 15.07 5.71 5.71 Total: 0.00 -9.86 378.87 -11.11 -20.97 By element: Atomic # 1 Polarization: -5.50 SS G_CDS: -5.28 Total: -10.78 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: -0.49 Total: 0.68 kcal Atomic # 7 Polarization: 1.42 SS G_CDS: -0.04 Total: 1.38 kcal Atomic # 8 Polarization: -10.20 SS G_CDS: -3.01 Total: -13.21 kcal Atomic # 9 Polarization: 0.22 SS G_CDS: 0.04 Total: 0.25 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.28 Total: -6.61 kcal Atomic # 16 Polarization: 4.36 SS G_CDS: -2.76 Total: 1.61 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -9.86 -11.11 -20.97 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15509220_14772022.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.738 kcal (2) G-P(sol) polarization free energy of solvation -9.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.598 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.973 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.96 seconds