Wall clock time and date at job start Mon Mar 8 2021 10:15:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52990 * 1 3 3 O 1.45195 * 109.47432 * 2 1 4 4 C 1.34222 * 117.00339 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00582 * 0.02562 * 4 3 2 6 6 C 1.50707 * 119.99990 * 180.02562 * 4 3 2 7 7 H 1.08995 * 112.84892 * 311.19341 * 6 4 3 8 8 C 1.53950 * 113.66690 * 82.44276 * 6 4 3 9 9 C 1.53780 * 87.02244 * 139.93327 * 8 6 4 10 10 F 1.39892 * 113.61727 * 89.22620 * 9 8 6 11 11 C 1.53000 * 113.61511 * 220.04985 * 9 8 6 12 12 N 1.46504 * 109.46739 * 279.13299 * 11 9 8 13 13 S 1.65600 * 119.99834 * 165.00048 * 12 11 9 14 14 O 1.42097 * 106.40375 * 311.45945 * 13 12 11 15 15 O 1.42106 * 106.40275 * 178.53878 * 13 12 11 16 16 C 1.76205 * 107.22031 * 64.99971 * 13 12 11 17 17 C 1.33383 * 122.53823 * 89.97029 * 16 13 12 18 18 S 1.75889 * 109.59330 * 180.02562 * 17 16 13 19 19 C 1.75890 * 90.96802 * 0.02562 * 18 17 16 20 20 C 1.50702 * 125.19922 * 179.97438 * 19 18 17 21 21 O 1.42904 * 109.46584 * 245.02376 * 20 19 18 22 22 Si 1.86293 * 109.47414 * 5.02347 * 20 19 18 23 23 C 1.33390 * 109.59395 * 359.97438 * 19 18 17 24 24 C 1.53785 * 113.61130 * 180.02562 * 6 4 3 25 25 H 1.09002 * 109.47260 * 179.97438 * 1 2 3 26 26 H 1.08993 * 109.47358 * 299.99467 * 1 2 3 27 27 H 1.09007 * 109.47357 * 59.99811 * 1 2 3 28 28 H 1.09004 * 109.46950 * 240.00323 * 2 1 3 29 29 H 1.08998 * 109.47428 * 120.00466 * 2 1 3 30 30 H 1.09000 * 113.61657 * 25.40656 * 8 6 4 31 31 H 1.09004 * 113.66317 * 254.45852 * 8 6 4 32 32 H 1.09001 * 109.47530 * 159.13576 * 11 9 8 33 33 H 1.09004 * 109.47245 * 39.12915 * 11 9 8 34 34 H 0.96997 * 120.00388 * 344.99960 * 12 11 9 35 35 H 1.07996 * 125.20664 * 0.06406 * 17 16 13 36 36 H 1.09002 * 109.47056 * 125.02564 * 20 19 18 37 37 H 0.96698 * 114.00443 * 60.00198 * 21 20 19 38 38 H 1.48503 * 110.00190 * 58.68025 * 22 20 19 39 39 H 1.48504 * 110.00113 * 180.02562 * 22 20 19 40 40 H 1.07999 * 122.53431 * 180.02562 * 23 19 18 41 41 H 1.08991 * 113.61343 * 105.47111 * 24 6 4 42 42 H 1.08997 * 113.61511 * 334.56413 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3446 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9206 2.9374 0.0012 7 1 3.4714 3.5816 -0.7546 8 6 3.9850 3.5789 1.3991 9 6 5.3560 4.1422 0.9896 10 9 5.2849 5.3932 0.3677 11 6 6.3978 4.0936 2.1091 12 7 6.1959 5.2282 3.0136 13 16 6.9190 5.2383 4.5033 14 8 6.6478 3.9726 5.0896 15 8 6.5616 6.4705 5.1145 16 6 8.6598 5.3011 4.2379 17 6 9.3297 6.4503 4.1405 18 16 11.0367 6.1176 3.8778 19 6 10.7354 4.3851 3.9155 20 6 11.7854 3.3170 3.7491 21 8 11.5332 2.5841 2.5486 22 14 13.4681 4.1102 3.6505 23 6 9.4355 4.1613 4.1138 24 6 5.4582 2.9680 0.0011 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3634 0.5137 0.8900 27 1 -0.3634 0.5139 -0.8900 28 1 1.8932 -0.5138 -0.8901 29 1 1.8933 -0.5139 0.8899 30 1 4.0358 2.8531 2.2107 31 1 3.2289 4.3468 1.5634 32 1 7.3975 4.1462 1.6777 33 1 6.2905 3.1622 2.6651 34 1 5.6388 5.9736 2.7398 35 1 8.8912 7.4346 4.2125 36 1 11.7526 2.6393 4.6022 37 1 11.5471 3.1250 1.7472 38 1 13.7294 4.9016 4.8797 39 1 14.5125 3.0673 3.4858 40 1 9.0198 3.1663 4.1730 41 1 5.8893 3.2435 -0.9613 42 1 5.9127 2.0748 0.4296 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_15509220_15065232.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:15:46 Heat of formation + Delta-G solvation = -172.678453 kcal Electronic energy + Delta-G solvation = -30728.611326 eV Core-core repulsion = 26037.971178 eV Total energy + Delta-G solvation = -4690.640149 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.069 amu Computer time = 2.12 seconds Orbital eigenvalues (eV) -48.98880 -41.75974 -39.57131 -39.40813 -38.29027 -37.63079 -37.48812 -36.91354 -36.02438 -32.74013 -31.90216 -29.56811 -27.29881 -27.27763 -26.16695 -24.99971 -23.84836 -22.07406 -21.48941 -20.93190 -20.19266 -19.31907 -19.14489 -18.52496 -18.10987 -17.87487 -17.70325 -17.51667 -17.29796 -17.06965 -16.43164 -16.25370 -16.06162 -15.64317 -15.46112 -15.27070 -15.07043 -14.81666 -14.60239 -14.34353 -14.24749 -14.16268 -14.00677 -13.77221 -13.75217 -13.38022 -13.20273 -13.08552 -13.03578 -12.96725 -12.95865 -12.65596 -12.53687 -12.52357 -12.27282 -11.92396 -11.74441 -11.63412 -11.54409 -11.35374 -10.81382 -10.72590 -10.27407 -9.93374 -5.30753 -0.83239 -0.53728 0.24086 0.50672 0.93412 1.07104 1.09985 1.45908 1.57382 1.77931 1.92332 2.63076 2.76268 2.82782 3.01259 3.16065 3.17582 3.27413 3.32145 3.54977 3.76617 3.77039 3.92734 3.96029 3.98045 4.03834 4.12877 4.24458 4.27178 4.29707 4.31854 4.37640 4.43866 4.57000 4.63812 4.66247 4.70218 4.78616 4.82584 4.99315 5.00162 5.02543 5.42866 5.71062 6.33549 6.69685 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.355 6.355 4 C 0.473 3.527 5 O -0.502 6.502 6 C -0.110 4.110 7 H 0.133 0.867 8 C -0.137 4.137 9 C 0.091 3.909 10 F -0.179 7.179 11 C 0.110 3.890 12 N -1.114 6.114 13 S 2.712 3.288 14 O -0.947 6.947 15 O -0.951 6.951 16 C -0.690 4.690 17 C -0.080 4.080 18 S 0.160 5.840 19 C -0.228 4.228 20 C -0.027 4.027 21 O -0.532 6.532 22 Si 0.656 3.344 23 C -0.046 4.046 24 C -0.131 4.131 25 H 0.082 0.918 26 H 0.068 0.932 27 H 0.067 0.933 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.111 0.889 31 H 0.100 0.900 32 H 0.085 0.915 33 H 0.104 0.896 34 H 0.424 0.576 35 H 0.187 0.813 36 H 0.127 0.873 37 H 0.380 0.620 38 H -0.238 1.238 39 H -0.231 1.231 40 H 0.157 0.843 41 H 0.099 0.901 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.400 1.859 -4.689 5.060 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.316 3.684 5 O -0.390 6.390 6 C -0.129 4.129 7 H 0.151 0.849 8 C -0.175 4.175 9 C 0.071 3.929 10 F -0.159 7.159 11 C -0.017 4.017 12 N -0.875 5.875 13 S 2.798 3.202 14 O -0.937 6.937 15 O -0.942 6.942 16 C -0.789 4.789 17 C -0.219 4.219 18 S 0.424 5.576 19 C -0.346 4.346 20 C -0.140 4.140 21 O -0.337 6.337 22 Si 0.555 3.445 23 C -0.075 4.075 24 C -0.169 4.169 25 H 0.100 0.900 26 H 0.087 0.913 27 H 0.086 0.914 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.129 0.871 31 H 0.119 0.881 32 H 0.103 0.897 33 H 0.122 0.878 34 H 0.260 0.740 35 H 0.204 0.796 36 H 0.144 0.856 37 H 0.228 0.772 38 H -0.162 1.162 39 H -0.154 1.154 40 H 0.175 0.825 41 H 0.117 0.883 42 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 2.391 1.848 -3.254 4.440 hybrid contribution -1.326 -0.689 -0.157 1.503 sum 1.065 1.158 -3.410 3.756 Atomic orbital electron populations 1.21824 0.92280 1.03311 1.03699 1.23109 0.95664 0.79694 1.02833 1.86512 1.24188 1.32901 1.83583 1.23307 0.80817 0.91995 0.72302 1.90695 1.60502 1.42788 1.44973 1.22530 0.97166 0.91797 1.01408 0.84873 1.23659 0.96780 1.01219 0.95814 1.21841 0.96993 0.80894 0.93151 1.92895 1.97135 1.42354 1.83496 1.21781 0.99173 0.90140 0.90582 1.55440 1.65101 1.30301 1.36632 1.01566 0.72774 0.73781 0.72075 1.93612 1.83288 1.42889 1.73885 1.93627 1.82294 1.45143 1.73093 1.30014 1.28088 0.98370 1.22468 1.25926 0.97484 1.01814 0.96692 1.84374 1.06305 1.00267 1.66652 1.25073 0.99366 0.97452 1.12724 1.24456 1.04052 0.94583 0.90941 1.86554 1.94658 1.37126 1.15364 0.95147 0.76559 0.84585 0.88163 1.19629 0.91912 0.98568 0.97345 1.23616 0.93774 0.98409 1.01084 0.89961 0.91318 0.91353 0.91023 0.90988 0.87063 0.88115 0.89706 0.87757 0.74015 0.79626 0.85583 0.77194 1.16239 1.15394 0.82515 0.88291 0.86108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.15 0.38 0.66 16 2 C 0.06 0.00 6.19 37.15 0.23 0.22 16 3 O -0.36 -0.40 10.22 -39.24 -0.40 -0.80 16 4 C 0.47 0.51 7.49 36.01 0.27 0.78 16 5 O -0.50 -1.85 15.65 -18.75 -0.29 -2.15 16 6 C -0.11 0.20 4.24 -90.86 -0.39 -0.19 16 7 H 0.13 -0.39 8.14 -51.93 -0.42 -0.81 16 8 C -0.14 0.35 7.09 -25.83 -0.18 0.16 16 9 C 0.09 -0.24 1.71 -89.78 -0.15 -0.39 16 10 F -0.18 0.20 16.70 2.25 0.04 0.24 16 11 C 0.11 -0.32 5.90 -4.04 -0.02 -0.35 16 12 N -1.11 2.40 5.96 -10.61 -0.06 2.34 16 13 S 2.71 1.42 5.80 -107.50 -0.62 0.80 16 14 O -0.95 -3.22 17.10 -57.17 -0.98 -4.20 16 15 O -0.95 -3.14 17.64 -57.17 -1.01 -4.15 16 16 C -0.69 0.14 5.86 -41.21 -0.24 -0.10 16 17 C -0.08 0.09 10.70 29.04 0.31 0.40 16 18 S 0.16 -0.27 20.60 -107.50 -2.21 -2.48 16 19 C -0.23 0.18 5.70 -36.00 -0.21 -0.03 16 20 C -0.03 0.03 2.96 36.01 0.11 0.14 16 21 O -0.53 0.63 12.88 -35.23 -0.45 0.18 16 22 Si 0.66 -1.17 30.98 -169.99 -5.27 -6.43 16 23 C -0.05 0.00 9.59 -41.21 -0.40 -0.39 16 24 C -0.13 0.34 6.87 -25.89 -0.18 0.16 16 25 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 30 H 0.11 -0.29 7.94 -51.93 -0.41 -0.70 16 31 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 32 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 33 H 0.10 -0.34 7.59 -51.93 -0.39 -0.74 16 34 H 0.42 -1.34 8.24 -34.47 -0.28 -1.62 16 35 H 0.19 -0.55 8.00 -52.49 -0.42 -0.97 16 36 H 0.13 -0.12 7.96 -51.93 -0.41 -0.53 16 37 H 0.38 -1.96 8.70 45.56 0.40 -1.56 16 38 H -0.24 -0.12 7.11 56.52 0.40 0.28 16 39 H -0.23 -0.22 7.11 56.52 0.40 0.18 16 40 H 0.16 -0.07 7.96 -52.49 -0.42 -0.49 16 41 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 42 H 0.12 -0.28 7.39 -51.93 -0.38 -0.67 16 LS Contribution 389.37 15.07 5.87 5.87 Total: 0.00 -11.03 389.37 -11.19 -22.22 By element: Atomic # 1 Polarization: -7.20 SS G_CDS: -5.33 Total: -12.53 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: -0.47 Total: 1.08 kcal Atomic # 7 Polarization: 2.40 SS G_CDS: -0.06 Total: 2.34 kcal Atomic # 8 Polarization: -7.98 SS G_CDS: -3.13 Total: -11.11 kcal Atomic # 9 Polarization: 0.20 SS G_CDS: 0.04 Total: 0.24 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.27 Total: -6.43 kcal Atomic # 16 Polarization: 1.15 SS G_CDS: -2.84 Total: -1.69 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -11.03 -11.19 -22.22 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15509220_15065232.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -150.454 kcal (2) G-P(sol) polarization free energy of solvation -11.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -161.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.225 kcal (6) G-S(sol) free energy of system = (1) + (5) -172.678 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.12 seconds