Wall clock time and date at job start Mon Mar 8 2021 10:15:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45207 * 109.47055 * 2 1 4 4 C 1.34222 * 117.00211 * 179.97438 * 3 2 1 5 5 O 1.20828 * 120.00161 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00102 * 179.97438 * 4 3 2 7 7 H 1.08995 * 112.90275 * 48.75283 * 6 4 3 8 8 C 1.53779 * 113.61182 * 179.97438 * 6 4 3 9 9 C 1.53784 * 87.08036 * 139.98300 * 8 6 4 10 10 F 1.39897 * 113.61544 * 89.19742 * 9 8 6 11 11 C 1.53001 * 113.61896 * 220.02000 * 9 8 6 12 12 N 1.46500 * 109.47306 * 184.99677 * 11 9 8 13 13 S 1.65602 * 119.99796 * 164.00964 * 12 11 9 14 14 O 1.42096 * 106.40201 * 310.92292 * 13 12 11 15 15 O 1.42099 * 106.39918 * 177.99729 * 13 12 11 16 16 C 1.76198 * 107.21507 * 64.46283 * 13 12 11 17 17 C 1.38208 * 120.00363 * 64.48356 * 16 13 12 18 18 C 1.50706 * 120.00028 * 359.71583 * 17 16 13 19 19 O 1.42898 * 109.47127 * 284.65357 * 18 17 16 20 20 Si 1.86298 * 109.46997 * 164.65087 * 18 17 16 21 21 C 1.38264 * 120.00126 * 179.97438 * 17 16 13 22 22 C 1.38209 * 120.00013 * 0.02562 * 21 17 16 23 23 C 1.38257 * 119.99899 * 359.97438 * 22 21 17 24 24 C 1.38214 * 120.00118 * 0.02562 * 23 22 21 25 25 C 1.53778 * 113.61510 * 277.49974 * 6 4 3 26 26 H 1.09000 * 109.47160 * 60.00934 * 1 2 3 27 27 H 1.09007 * 109.46783 * 179.97438 * 1 2 3 28 28 H 1.08990 * 109.47475 * 300.00240 * 1 2 3 29 29 H 1.08998 * 109.47268 * 239.99902 * 2 1 3 30 30 H 1.09000 * 109.47198 * 119.99854 * 2 1 3 31 31 H 1.09001 * 113.61598 * 25.43841 * 8 6 4 32 32 H 1.08995 * 113.61891 * 254.52504 * 8 6 4 33 33 H 1.09000 * 109.47026 * 64.99705 * 11 9 8 34 34 H 1.08997 * 109.46843 * 304.99935 * 11 9 8 35 35 H 0.97002 * 119.99925 * 344.00958 * 12 11 9 36 36 H 1.08994 * 109.46657 * 44.64962 * 18 17 16 37 37 H 0.96708 * 114.00058 * 299.99912 * 19 18 17 38 38 H 1.48493 * 109.99994 * 58.68561 * 20 18 17 39 39 H 1.48503 * 109.99553 * 180.02562 * 20 18 17 40 40 H 1.08001 * 119.99677 * 179.97438 * 21 17 16 41 41 H 1.07998 * 119.99823 * 180.02562 * 22 21 17 42 42 H 1.08003 * 119.99979 * 180.02562 * 23 22 21 43 43 H 1.07999 * 120.00066 * 180.02562 * 24 23 22 44 44 H 1.08995 * 113.61506 * 105.47014 * 25 6 4 45 45 H 1.09001 * 113.61449 * 334.56304 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3446 1.5450 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9206 2.9376 0.0000 7 1 3.4706 3.5830 0.7543 8 6 5.4581 2.9682 0.0013 9 6 5.3572 4.1419 -0.9872 10 9 5.2852 5.3933 -0.3660 11 6 6.4003 4.0929 -2.1055 12 7 6.3005 5.3065 -2.9200 13 16 7.5354 5.7214 -3.9423 14 8 8.7319 5.6401 -3.1800 15 8 7.1205 6.9029 -4.6139 16 6 7.6413 4.4622 -5.1702 17 6 6.5936 4.2647 -6.0496 18 6 5.3578 5.1220 -5.9542 19 8 4.5730 4.7037 -4.8357 20 14 4.3573 4.9452 -7.5158 21 6 6.6769 3.2769 -7.0135 22 6 7.8077 2.4867 -7.0972 23 6 8.8558 2.6843 -6.2175 24 6 8.7725 3.6718 -5.2540 25 6 3.9868 3.5763 -1.3973 26 1 -0.3633 0.5137 -0.8901 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 5.9130 2.0749 -0.4266 32 1 5.8885 3.2441 0.9640 33 1 6.2207 3.2191 -2.7319 34 1 7.3973 4.0287 -1.6697 35 1 5.5110 5.8670 -2.8604 36 1 5.6482 6.1646 -5.8248 37 1 4.2790 3.7837 -4.8835 38 1 3.9823 3.5231 -7.7204 39 1 3.1362 5.7864 -7.4345 40 1 5.8580 3.1223 -7.7004 41 1 7.8730 1.7154 -7.8504 42 1 9.7397 2.0671 -6.2832 43 1 9.5914 3.8264 -4.5671 44 1 3.2298 4.3427 -1.5633 45 1 4.0393 2.8492 -2.2077 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_15509220_2726874.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:15:54 Heat of formation + Delta-G solvation = -172.230208 kcal Electronic energy + Delta-G solvation = -33705.283813 eV Core-core repulsion = 28925.510855 eV Total energy + Delta-G solvation = -4779.772958 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.112 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -48.85951 -41.79362 -40.82460 -39.40079 -38.46099 -37.75307 -37.48572 -36.83301 -35.84266 -32.96005 -32.78814 -32.50547 -29.48266 -27.27654 -27.06161 -26.11463 -24.53087 -23.87841 -22.91334 -22.05034 -20.94232 -20.51042 -19.39801 -19.12374 -18.45990 -18.18139 -17.92713 -17.67355 -17.43388 -17.07197 -16.90299 -16.61669 -16.25312 -16.04852 -15.96749 -15.86748 -15.48863 -15.17202 -15.09393 -14.81211 -14.59700 -14.31154 -14.25169 -13.96850 -13.81894 -13.73834 -13.62182 -13.25600 -13.17451 -13.05833 -13.03932 -12.98701 -12.90882 -12.65030 -12.55893 -12.42547 -12.03964 -11.80110 -11.63936 -11.59798 -11.50705 -11.29821 -10.81821 -10.61115 -10.54293 -10.18415 -5.07045 -0.65033 -0.35216 0.01070 1.06106 1.10062 1.42988 1.53792 1.81886 1.89092 2.26370 2.68858 2.79078 2.88068 3.10885 3.17913 3.20684 3.24927 3.29967 3.44024 3.68528 3.76469 3.78283 3.87360 3.92371 4.02592 4.05730 4.07388 4.19567 4.21402 4.30461 4.31652 4.41631 4.42406 4.49365 4.52657 4.64846 4.67495 4.68562 4.72504 4.73178 4.90023 4.95077 5.00283 5.05433 5.15480 5.38109 5.60195 5.97164 6.14595 6.65673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.474 3.526 5 O -0.504 6.504 6 C -0.111 4.111 7 H 0.133 0.867 8 C -0.133 4.133 9 C 0.095 3.905 10 F -0.176 7.176 11 C 0.116 3.884 12 N -1.097 6.097 13 S 2.701 3.299 14 O -0.957 6.957 15 O -0.952 6.952 16 C -0.659 4.659 17 C -0.011 4.011 18 C -0.132 4.132 19 O -0.516 6.516 20 Si 0.706 3.294 21 C -0.145 4.145 22 C -0.057 4.057 23 C -0.133 4.133 24 C -0.021 4.021 25 C -0.132 4.132 26 H 0.067 0.933 27 H 0.082 0.918 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.072 0.928 31 H 0.118 0.882 32 H 0.098 0.902 33 H 0.084 0.916 34 H 0.094 0.906 35 H 0.427 0.573 36 H 0.153 0.847 37 H 0.374 0.626 38 H -0.258 1.258 39 H -0.250 1.250 40 H 0.137 0.863 41 H 0.135 0.865 42 H 0.137 0.863 43 H 0.147 0.853 44 H 0.100 0.900 45 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.537 -4.649 -3.111 6.142 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.316 3.684 5 O -0.391 6.391 6 C -0.130 4.130 7 H 0.151 0.849 8 C -0.171 4.171 9 C 0.075 3.925 10 F -0.157 7.157 11 C -0.011 4.011 12 N -0.859 5.859 13 S 2.790 3.210 14 O -0.947 6.947 15 O -0.943 6.943 16 C -0.745 4.745 17 C -0.013 4.013 18 C -0.241 4.241 19 O -0.322 6.322 20 Si 0.606 3.394 21 C -0.163 4.163 22 C -0.075 4.075 23 C -0.152 4.152 24 C -0.040 4.040 25 C -0.169 4.169 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.087 0.913 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.137 0.863 32 H 0.117 0.883 33 H 0.102 0.898 34 H 0.112 0.888 35 H 0.264 0.736 36 H 0.171 0.829 37 H 0.222 0.778 38 H -0.183 1.183 39 H -0.174 1.174 40 H 0.154 0.846 41 H 0.153 0.847 42 H 0.154 0.846 43 H 0.164 0.836 44 H 0.119 0.881 45 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -2.326 -3.936 -3.211 5.587 hybrid contribution -0.740 -1.461 0.564 1.732 sum -3.066 -5.396 -2.647 6.748 Atomic orbital electron populations 1.21825 0.92275 1.03301 1.03718 1.23102 0.95666 0.79745 1.02765 1.86523 1.24246 1.32826 1.83589 1.23354 0.80753 0.92044 0.72207 1.90690 1.60519 1.42831 1.45090 1.22520 0.97218 0.91668 1.01620 0.84904 1.23637 0.93618 0.98539 1.01351 1.21794 0.96741 0.80851 0.93086 1.92909 1.97083 1.42213 1.83450 1.21660 1.00231 0.87760 0.91457 1.55134 1.38365 1.35977 1.56380 1.01738 0.72750 0.73374 0.73175 1.93593 1.45016 1.86569 1.69520 1.93565 1.82073 1.44116 1.74503 1.30812 1.02056 1.21927 1.19740 1.19890 0.94077 0.94307 0.93009 1.25781 0.93240 1.03022 1.02099 1.86663 1.70653 1.33425 1.41494 0.94229 0.81987 0.81160 0.81991 1.21340 0.99503 0.96419 0.99086 1.21499 0.92342 0.96854 0.96781 1.21419 0.99515 0.98591 0.95696 1.21103 0.95343 0.91363 0.96175 1.23586 0.97070 1.00933 0.95343 0.91375 0.89970 0.91290 0.91116 0.91010 0.86337 0.88324 0.89819 0.88782 0.73625 0.82946 0.77829 1.18340 1.17439 0.84576 0.84695 0.84561 0.83578 0.88109 0.87530 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.32 10.29 37.16 0.38 0.70 16 2 C 0.06 -0.02 6.19 37.16 0.23 0.21 16 3 O -0.36 -0.31 10.22 -39.24 -0.40 -0.71 16 4 C 0.47 0.42 7.48 36.01 0.27 0.69 16 5 O -0.50 -1.73 15.65 -18.75 -0.29 -2.03 16 6 C -0.11 0.17 4.24 -90.96 -0.39 -0.21 16 7 H 0.13 -0.31 8.14 -51.93 -0.42 -0.74 16 8 C -0.13 0.25 6.86 -25.92 -0.18 0.07 16 9 C 0.10 -0.17 1.70 -89.78 -0.15 -0.32 16 10 F -0.18 -0.13 16.82 2.25 0.04 -0.09 16 11 C 0.12 -0.23 5.97 -4.04 -0.02 -0.25 16 12 N -1.10 0.67 4.04 -10.61 -0.04 0.62 16 13 S 2.70 4.86 5.07 -107.50 -0.54 4.32 16 14 O -0.96 -4.24 16.45 -57.17 -0.94 -5.18 16 15 O -0.95 -4.05 15.53 -57.17 -0.89 -4.94 16 16 C -0.66 -0.21 5.87 -39.58 -0.23 -0.44 16 17 C -0.01 0.01 5.25 -104.62 -0.55 -0.54 16 18 C -0.13 0.14 2.03 36.01 0.07 0.21 16 19 O -0.52 1.18 10.57 -35.23 -0.37 0.80 16 20 Si 0.71 -1.32 30.27 -169.99 -5.15 -6.47 16 21 C -0.15 0.25 8.66 -39.58 -0.34 -0.09 16 22 C -0.06 0.12 10.05 -39.59 -0.40 -0.28 16 23 C -0.13 0.21 10.05 -39.58 -0.40 -0.18 16 24 C -0.02 0.01 9.55 -39.58 -0.38 -0.37 16 25 C -0.13 0.37 7.08 -25.90 -0.18 0.19 16 26 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 31 H 0.12 -0.23 7.39 -51.93 -0.38 -0.62 16 32 H 0.10 -0.20 8.14 -51.93 -0.42 -0.63 16 33 H 0.08 -0.34 7.85 -51.93 -0.41 -0.75 16 34 H 0.09 -0.17 7.74 -51.93 -0.40 -0.57 16 35 H 0.43 -0.45 8.00 -34.48 -0.28 -0.72 16 36 H 0.15 0.05 5.39 -51.93 -0.28 -0.23 16 37 H 0.37 -1.91 8.70 45.56 0.40 -1.52 16 38 H -0.26 0.27 6.67 56.52 0.38 0.64 16 39 H -0.25 -0.32 7.11 56.52 0.40 0.09 16 40 H 0.14 -0.44 4.87 -52.49 -0.26 -0.69 16 41 H 0.14 -0.59 8.06 -52.49 -0.42 -1.01 16 42 H 0.14 -0.49 8.06 -52.48 -0.42 -0.91 16 43 H 0.15 -0.13 7.34 -52.49 -0.39 -0.51 16 44 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 45 H 0.11 -0.43 7.85 -51.93 -0.41 -0.83 16 LS Contribution 386.00 15.07 5.82 5.82 Total: 0.00 -10.04 386.00 -10.89 -20.93 By element: Atomic # 1 Polarization: -6.60 SS G_CDS: -5.85 Total: -12.45 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -2.27 Total: -0.62 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.04 Total: 0.62 kcal Atomic # 8 Polarization: -9.16 SS G_CDS: -2.90 Total: -12.06 kcal Atomic # 9 Polarization: -0.13 SS G_CDS: 0.04 Total: -0.09 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.15 Total: -6.47 kcal Atomic # 16 Polarization: 4.86 SS G_CDS: -0.54 Total: 4.32 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -10.04 -10.89 -20.93 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15509220_2726874.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.302 kcal (2) G-P(sol) polarization free energy of solvation -10.039 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -161.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.928 kcal (6) G-S(sol) free energy of system = (1) + (5) -172.230 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds