Wall clock time and date at job start Mon Mar 8 2021 10:15:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45207 * 109.47055 * 2 1 4 4 C 1.34222 * 117.00211 * 179.97438 * 3 2 1 5 5 O 1.20828 * 120.00161 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00102 * 179.97438 * 4 3 2 7 7 H 1.08995 * 112.90275 * 48.75283 * 6 4 3 8 8 C 1.53779 * 113.61182 * 179.97438 * 6 4 3 9 9 C 1.53784 * 87.08036 * 139.98300 * 8 6 4 10 10 F 1.39897 * 113.61544 * 89.19742 * 9 8 6 11 11 C 1.53001 * 113.61896 * 220.02000 * 9 8 6 12 12 N 1.46500 * 109.47306 * 184.99677 * 11 9 8 13 13 S 1.65602 * 119.99796 * 164.00964 * 12 11 9 14 14 O 1.42096 * 106.40201 * 310.92292 * 13 12 11 15 15 O 1.42099 * 106.39918 * 177.99729 * 13 12 11 16 16 C 1.76198 * 107.21507 * 64.46283 * 13 12 11 17 17 C 1.38208 * 120.00363 * 64.48356 * 16 13 12 18 18 C 1.50706 * 120.00028 * 359.71583 * 17 16 13 19 19 O 1.42898 * 109.47127 * 284.65357 * 18 17 16 20 20 Si 1.86298 * 109.46997 * 164.65087 * 18 17 16 21 21 C 1.38264 * 120.00126 * 179.97438 * 17 16 13 22 22 C 1.38209 * 120.00013 * 0.02562 * 21 17 16 23 23 C 1.38257 * 119.99899 * 359.97438 * 22 21 17 24 24 C 1.38214 * 120.00118 * 0.02562 * 23 22 21 25 25 C 1.53778 * 113.61510 * 277.49974 * 6 4 3 26 26 H 1.09000 * 109.47160 * 60.00934 * 1 2 3 27 27 H 1.09007 * 109.46783 * 179.97438 * 1 2 3 28 28 H 1.08990 * 109.47475 * 300.00240 * 1 2 3 29 29 H 1.08998 * 109.47268 * 239.99902 * 2 1 3 30 30 H 1.09000 * 109.47198 * 119.99854 * 2 1 3 31 31 H 1.09001 * 113.61598 * 25.43841 * 8 6 4 32 32 H 1.08995 * 113.61891 * 254.52504 * 8 6 4 33 33 H 1.09000 * 109.47026 * 64.99705 * 11 9 8 34 34 H 1.08997 * 109.46843 * 304.99935 * 11 9 8 35 35 H 0.97002 * 119.99925 * 344.00958 * 12 11 9 36 36 H 1.08994 * 109.46657 * 44.64962 * 18 17 16 37 37 H 0.96708 * 114.00058 * 299.99912 * 19 18 17 38 38 H 1.48493 * 109.99994 * 58.68561 * 20 18 17 39 39 H 1.48503 * 109.99553 * 180.02562 * 20 18 17 40 40 H 1.08001 * 119.99677 * 179.97438 * 21 17 16 41 41 H 1.07998 * 119.99823 * 180.02562 * 22 21 17 42 42 H 1.08003 * 119.99979 * 180.02562 * 23 22 21 43 43 H 1.07999 * 120.00066 * 180.02562 * 24 23 22 44 44 H 1.08995 * 113.61506 * 105.47014 * 25 6 4 45 45 H 1.09001 * 113.61449 * 334.56304 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3446 1.5450 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9206 2.9376 0.0000 7 1 3.4706 3.5830 0.7543 8 6 5.4581 2.9682 0.0013 9 6 5.3572 4.1419 -0.9872 10 9 5.2852 5.3933 -0.3660 11 6 6.4003 4.0929 -2.1055 12 7 6.3005 5.3065 -2.9200 13 16 7.5354 5.7214 -3.9423 14 8 8.7319 5.6401 -3.1800 15 8 7.1205 6.9029 -4.6139 16 6 7.6413 4.4622 -5.1702 17 6 6.5936 4.2647 -6.0496 18 6 5.3578 5.1220 -5.9542 19 8 4.5730 4.7037 -4.8357 20 14 4.3573 4.9452 -7.5158 21 6 6.6769 3.2769 -7.0135 22 6 7.8077 2.4867 -7.0972 23 6 8.8558 2.6843 -6.2175 24 6 8.7725 3.6718 -5.2540 25 6 3.9868 3.5763 -1.3973 26 1 -0.3633 0.5137 -0.8901 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 5.9130 2.0749 -0.4266 32 1 5.8885 3.2441 0.9640 33 1 6.2207 3.2191 -2.7319 34 1 7.3973 4.0287 -1.6697 35 1 5.5110 5.8670 -2.8604 36 1 5.6482 6.1646 -5.8248 37 1 4.2790 3.7837 -4.8835 38 1 3.9823 3.5231 -7.7204 39 1 3.1362 5.7864 -7.4345 40 1 5.8580 3.1223 -7.7004 41 1 7.8730 1.7154 -7.8504 42 1 9.7397 2.0671 -6.2832 43 1 9.5914 3.8264 -4.5671 44 1 3.2298 4.3427 -1.5633 45 1 4.0393 2.8492 -2.2077 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_15509220_2726874.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:15:53 Heat of formation + Delta-G solvation = -172.539750 kcal Electronic energy + Delta-G solvation = -33705.297235 eV Core-core repulsion = 28925.510855 eV Total energy + Delta-G solvation = -4779.786380 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.112 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -48.83473 -41.82727 -40.69541 -39.31977 -38.58961 -37.70274 -37.52848 -37.06319 -35.80001 -32.82167 -32.70064 -32.38524 -29.41011 -27.10583 -26.93579 -26.05366 -24.42452 -23.79024 -22.79384 -22.03047 -20.90409 -20.50240 -19.35611 -19.12778 -18.52076 -18.08874 -17.94030 -17.69438 -17.38035 -16.97989 -16.81030 -16.53345 -16.20311 -16.02307 -15.86344 -15.78756 -15.49051 -15.11940 -15.00499 -14.72974 -14.56801 -14.22999 -14.14675 -13.86206 -13.70056 -13.58776 -13.53070 -13.36368 -13.31656 -13.28148 -12.99275 -12.89589 -12.88113 -12.56685 -12.48761 -12.37532 -11.96774 -11.76632 -11.59209 -11.53077 -11.43388 -11.27861 -10.68917 -10.51948 -10.44175 -10.05351 -4.91590 -0.71434 -0.28750 0.14557 1.01512 1.22831 1.54051 1.57721 1.86996 1.93463 2.37621 2.63642 2.93000 3.01082 3.18660 3.30954 3.33076 3.35950 3.43219 3.50246 3.80497 3.86391 3.94832 3.99909 4.01277 4.17673 4.20997 4.25984 4.29596 4.32491 4.45589 4.50600 4.52177 4.58562 4.62422 4.69338 4.79335 4.83496 4.83841 4.86126 4.86802 5.01770 5.10360 5.18280 5.19614 5.31606 5.39745 5.76536 6.02572 6.47691 6.61357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.054 3.946 3 O -0.361 6.361 4 C 0.476 3.524 5 O -0.533 6.533 6 C -0.112 4.112 7 H 0.140 0.860 8 C -0.132 4.132 9 C 0.094 3.906 10 F -0.192 7.192 11 C 0.111 3.889 12 N -1.091 6.091 13 S 2.707 3.293 14 O -0.991 6.991 15 O -0.984 6.984 16 C -0.665 4.665 17 C -0.015 4.015 18 C -0.140 4.140 19 O -0.521 6.521 20 Si 0.770 3.230 21 C -0.147 4.147 22 C -0.053 4.053 23 C -0.136 4.136 24 C -0.036 4.036 25 C -0.122 4.122 26 H 0.069 0.931 27 H 0.096 0.904 28 H 0.066 0.934 29 H 0.072 0.928 30 H 0.067 0.933 31 H 0.121 0.879 32 H 0.098 0.902 33 H 0.109 0.891 34 H 0.090 0.910 35 H 0.429 0.571 36 H 0.135 0.865 37 H 0.388 0.612 38 H -0.258 1.258 39 H -0.298 1.298 40 H 0.154 0.846 41 H 0.163 0.837 42 H 0.156 0.844 43 H 0.144 0.856 44 H 0.106 0.894 45 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.061 -6.227 -4.287 8.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.019 4.019 3 O -0.278 6.278 4 C 0.320 3.680 5 O -0.422 6.422 6 C -0.131 4.131 7 H 0.158 0.842 8 C -0.170 4.170 9 C 0.074 3.926 10 F -0.173 7.173 11 C -0.016 4.016 12 N -0.854 5.854 13 S 2.800 3.200 14 O -0.981 6.981 15 O -0.975 6.975 16 C -0.754 4.754 17 C -0.017 4.017 18 C -0.249 4.249 19 O -0.329 6.329 20 Si 0.673 3.327 21 C -0.165 4.165 22 C -0.071 4.071 23 C -0.155 4.155 24 C -0.055 4.055 25 C -0.159 4.159 26 H 0.088 0.912 27 H 0.114 0.886 28 H 0.085 0.915 29 H 0.090 0.910 30 H 0.085 0.915 31 H 0.139 0.861 32 H 0.117 0.883 33 H 0.127 0.873 34 H 0.108 0.892 35 H 0.267 0.733 36 H 0.153 0.847 37 H 0.238 0.762 38 H -0.183 1.183 39 H -0.225 1.225 40 H 0.171 0.829 41 H 0.180 0.820 42 H 0.174 0.826 43 H 0.162 0.838 44 H 0.124 0.876 45 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -2.843 -5.501 -4.353 7.569 hybrid contribution -0.619 -1.010 0.951 1.519 sum -3.462 -6.511 -3.402 8.121 Atomic orbital electron populations 1.21830 0.90926 1.04226 1.03682 1.23258 0.96770 0.79267 1.02623 1.86534 1.24298 1.33560 1.83362 1.23767 0.80535 0.92531 0.71144 1.90673 1.61040 1.43932 1.46604 1.22615 0.97196 0.90475 1.02771 0.84184 1.23644 0.93509 0.98463 1.01397 1.21875 0.97549 0.80129 0.93062 1.92877 1.97196 1.43371 1.83824 1.21861 1.00106 0.87962 0.91644 1.54903 1.37683 1.36585 1.56193 1.01133 0.72332 0.73338 0.73225 1.93544 1.46810 1.87198 1.70589 1.93522 1.82442 1.46337 1.75167 1.30453 1.03119 1.21930 1.19886 1.19957 0.93748 0.94746 0.93223 1.25859 0.93710 1.02258 1.03066 1.86636 1.70435 1.34720 1.41121 0.93415 0.79231 0.79181 0.80913 1.21566 1.00292 0.95858 0.98760 1.21873 0.91587 0.96907 0.96740 1.21700 1.00528 0.98156 0.95111 1.21237 0.95201 0.92078 0.97007 1.23610 0.96289 1.01040 0.95004 0.91210 0.88582 0.91460 0.91007 0.91463 0.86094 0.88316 0.87331 0.89220 0.73334 0.84706 0.76195 1.18317 1.22549 0.82860 0.81966 0.82607 0.83829 0.87558 0.85973 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.69 10.29 71.98 0.74 1.43 16 2 C 0.05 -0.04 6.19 71.98 0.45 0.41 16 3 O -0.36 -0.65 10.22 -51.34 -0.52 -1.17 16 4 C 0.48 0.90 7.48 71.24 0.53 1.43 16 5 O -0.53 -3.87 15.65 21.96 0.34 -3.52 16 6 C -0.11 0.36 4.24 -11.01 -0.05 0.32 16 7 H 0.14 -0.67 8.14 -2.39 -0.02 -0.69 16 8 C -0.13 0.47 6.86 31.12 0.21 0.68 16 9 C 0.09 -0.31 1.70 -10.25 -0.02 -0.33 16 10 F -0.19 -0.42 16.82 44.97 0.76 0.34 16 11 C 0.11 -0.40 5.97 86.38 0.52 0.11 16 12 N -1.09 0.30 4.04 -187.49 -0.76 -0.46 16 13 S 2.71 14.13 5.07 -56.49 -0.29 13.84 16 14 O -0.99 -10.85 16.45 -128.00 -2.11 -12.96 16 15 O -0.98 -10.49 15.53 -128.00 -1.99 -12.48 16 16 C -0.66 -0.72 5.87 22.27 0.13 -0.58 16 17 C -0.01 0.03 5.25 -19.86 -0.10 -0.08 16 18 C -0.14 0.27 2.03 71.24 0.14 0.41 16 19 O -0.52 2.49 10.57 -148.98 -1.58 0.92 16 20 Si 0.77 -3.20 30.27 68.60 2.08 -1.13 16 21 C -0.15 0.77 8.66 22.27 0.19 0.97 16 22 C -0.05 0.35 10.05 22.27 0.22 0.57 16 23 C -0.14 0.62 10.05 22.27 0.22 0.84 16 24 C -0.04 0.01 9.55 22.27 0.21 0.23 16 25 C -0.12 0.76 7.08 31.13 0.22 0.98 16 26 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 27 H 0.10 -0.71 8.14 -2.38 -0.02 -0.73 16 28 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 29 H 0.07 -0.08 8.13 -2.39 -0.02 -0.10 16 30 H 0.07 0.00 8.13 -2.39 -0.02 -0.02 16 31 H 0.12 -0.47 7.39 -2.39 -0.02 -0.48 16 32 H 0.10 -0.35 8.14 -2.39 -0.02 -0.37 16 33 H 0.11 -0.95 7.85 -2.39 -0.02 -0.97 16 34 H 0.09 -0.23 7.74 -2.39 -0.02 -0.25 16 35 H 0.43 -0.44 8.00 -96.74 -0.77 -1.22 16 36 H 0.14 0.27 5.39 -2.39 -0.01 0.25 16 37 H 0.39 -4.44 8.70 -74.05 -0.64 -5.09 16 38 H -0.26 1.06 6.67 99.48 0.66 1.73 16 39 H -0.30 -1.13 7.11 99.48 0.71 -0.42 16 40 H 0.15 -1.38 4.87 -2.91 -0.01 -1.39 16 41 H 0.16 -1.97 8.06 -2.91 -0.02 -1.99 16 42 H 0.16 -1.40 8.06 -2.91 -0.02 -1.42 16 43 H 0.14 -0.09 7.34 -2.91 -0.02 -0.11 16 44 H 0.11 -0.73 8.14 -2.39 -0.02 -0.75 16 45 H 0.12 -1.14 7.85 -2.39 -0.02 -1.16 16 Total: 0.00 -24.26 386.00 -0.80 -25.07 By element: Atomic # 1 Polarization: -15.46 SS G_CDS: -0.37 Total: -15.83 kcal Atomic # 6 Polarization: 3.76 SS G_CDS: 3.63 Total: 7.39 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.76 Total: -0.46 kcal Atomic # 8 Polarization: -23.37 SS G_CDS: -5.85 Total: -29.22 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.76 Total: 0.34 kcal Atomic # 14 Polarization: -3.20 SS G_CDS: 2.08 Total: -1.13 kcal Atomic # 16 Polarization: 14.13 SS G_CDS: -0.29 Total: 13.84 kcal Total: -24.26 -0.80 -25.07 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15509220_2726874.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.475 kcal (2) G-P(sol) polarization free energy of solvation -24.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -171.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.065 kcal (6) G-S(sol) free energy of system = (1) + (5) -172.540 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds