Wall clock time and date at job start Mon Mar 8 2021 10:23:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42910 * 1 3 3 C 1.35898 * 116.99447 * 2 1 4 4 C 1.38716 * 120.05064 * 180.02562 * 3 2 1 5 5 C 1.50700 * 120.02784 * 359.95124 * 4 3 2 6 6 H 1.08997 * 112.85044 * 348.80332 * 5 4 3 7 7 C 1.53782 * 113.61511 * 120.00533 * 5 4 3 8 8 C 1.53772 * 87.08254 * 139.97799 * 7 5 4 9 9 H 1.08995 * 113.61429 * 219.93176 * 8 7 5 10 10 N 1.46508 * 113.61519 * 89.11481 * 8 7 5 11 11 S 1.65600 * 119.99855 * 143.38542 * 10 8 7 12 12 O 1.42104 * 106.40297 * 312.83069 * 11 10 8 13 13 O 1.42104 * 106.39937 * 179.91310 * 11 10 8 14 14 C 1.76201 * 107.21853 * 66.37373 * 11 10 8 15 15 C 1.33384 * 122.53568 * 67.07699 * 14 11 10 16 16 C 1.50698 * 125.20759 * 0.02562 * 15 14 11 17 17 O 1.42905 * 109.47113 * 319.18612 * 16 15 14 18 18 Si 1.86302 * 109.47162 * 199.18914 * 16 15 14 19 19 S 1.75890 * 109.59008 * 179.90558 * 15 14 11 20 20 C 1.75881 * 90.96808 * 0.29746 * 19 15 14 21 21 C 1.33392 * 109.59698 * 359.83041 * 20 19 15 22 22 C 1.53775 * 87.17700 * 334.52339 * 8 7 5 23 23 C 1.38164 * 119.94324 * 180.23239 * 4 3 2 24 24 C 1.38247 * 120.05246 * 359.46268 * 23 4 3 25 25 C 1.38288 * 120.11409 * 0.56166 * 24 23 4 26 26 C 1.38120 * 120.05488 * 359.69124 * 25 24 23 27 27 H 1.09001 * 109.46985 * 180.02562 * 1 2 3 28 28 H 1.08996 * 109.46995 * 300.00214 * 1 2 3 29 29 H 1.08992 * 109.47165 * 60.00354 * 1 2 3 30 30 H 1.08995 * 113.61295 * 25.42824 * 7 5 4 31 31 H 1.08996 * 113.68689 * 254.54127 * 7 5 4 32 32 H 0.96994 * 119.99548 * 323.38436 * 10 8 7 33 33 H 1.08998 * 109.47255 * 79.18760 * 16 15 14 34 34 H 0.96701 * 113.99946 * 294.02990 * 17 16 15 35 35 H 1.48491 * 110.00338 * 58.67835 * 18 16 15 36 36 H 1.48499 * 110.00049 * 180.02562 * 18 16 15 37 37 H 1.08006 * 125.20128 * 179.86797 * 20 19 15 38 38 H 1.07993 * 122.53991 * 180.02562 * 21 20 19 39 39 H 1.08997 * 113.61573 * 140.01831 * 22 8 7 40 40 H 1.08998 * 113.61706 * 270.92957 * 22 8 7 41 41 H 1.07999 * 119.97416 * 179.74488 * 23 4 3 42 42 H 1.08003 * 119.94192 * 180.25338 * 24 23 4 43 43 H 1.08000 * 119.97230 * 179.72708 * 25 24 23 44 44 H 1.07992 * 120.03102 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2849 -0.0005 5 6 4.2538 0.0222 0.0000 6 1 3.6593 -0.8702 0.1958 7 6 5.1800 -0.1101 -1.2204 8 6 6.2406 -0.6674 -0.2565 9 1 7.2497 -0.3121 -0.4649 10 7 6.1731 -2.1210 -0.0864 11 16 7.5660 -3.0002 0.0844 12 8 8.4498 -2.5538 -0.9348 13 8 7.1688 -4.3569 0.2295 14 6 8.2956 -2.5288 1.6174 15 6 7.7324 -2.8042 2.7948 16 6 6.4294 -3.5371 2.9843 17 8 5.4876 -3.0957 2.0043 18 14 5.7623 -3.1874 4.6883 19 16 8.7450 -2.1842 4.0924 20 6 9.9061 -1.5596 2.9282 21 6 9.4937 -1.8395 1.6909 22 6 5.5293 0.1169 0.8587 23 6 4.0560 2.5172 0.0043 24 6 3.3018 3.6758 -0.0015 25 6 1.9208 3.6048 -0.0005 26 6 1.2914 2.3753 -0.0001 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5137 -0.8899 30 1 5.4543 0.8460 -1.6660 31 1 4.8340 -0.8361 -1.9561 32 1 5.3125 -2.5683 -0.0738 33 1 6.5954 -4.6085 2.8719 34 1 5.2224 -2.1709 2.1022 35 1 5.5616 -1.7268 4.8653 36 1 4.4776 -3.9050 4.8879 37 1 10.8144 -1.0309 3.1771 38 1 10.0525 -1.5506 0.8131 39 1 5.4641 -0.4264 1.8013 40 1 5.8990 1.1351 0.9805 41 1 5.1344 2.5753 0.0081 42 1 3.7921 4.6381 -0.0018 43 1 1.3339 4.5114 -0.0006 44 1 0.2128 2.3203 0.0003 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_15784318_14772022.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:23:55 Heat of formation + Delta-G solvation = -34.706471 kcal Electronic energy + Delta-G solvation = -32011.479228 eV Core-core repulsion = 27730.279740 eV Total energy + Delta-G solvation = -4281.199488 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.079 amu Computer time = 2.08 seconds Orbital eigenvalues (eV) -41.64278 -40.17757 -39.63319 -38.22791 -38.19626 -37.43042 -36.63259 -34.23861 -31.86102 -31.56848 -31.10341 -28.27636 -27.56632 -26.77263 -26.09053 -24.40941 -23.22273 -22.69275 -21.76716 -20.52989 -19.90119 -19.45733 -19.07691 -18.60173 -18.06912 -17.39914 -17.12756 -16.90723 -16.75205 -16.72670 -16.48092 -15.91248 -15.51071 -15.45732 -15.28833 -15.21631 -14.94315 -14.50646 -14.31665 -14.14771 -14.10396 -13.88135 -13.69016 -13.36572 -13.34688 -12.98664 -12.95742 -12.82445 -12.74486 -12.65491 -12.51195 -12.29982 -12.23637 -12.12548 -11.89919 -11.71378 -11.57010 -11.22093 -11.19008 -10.42623 -10.13198 -9.80144 -9.77064 -9.09671 -5.28337 -0.59883 -0.42109 0.31127 0.33923 0.46785 0.61587 0.97284 1.14854 1.40233 1.71676 2.13354 2.28579 2.72672 2.82393 3.03228 3.23853 3.39517 3.54022 3.59609 3.63625 3.84219 3.89259 3.98021 4.01950 4.11426 4.15644 4.16927 4.17805 4.26502 4.36806 4.40445 4.41959 4.52306 4.57310 4.62636 4.67567 4.72384 4.85599 4.90148 4.93170 5.00571 5.04766 5.14013 5.33390 5.37098 5.52846 5.59470 5.78563 5.99050 6.13349 6.39221 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.315 6.315 3 C 0.130 3.870 4 C -0.104 4.104 5 C -0.064 4.064 6 H 0.106 0.894 7 C -0.132 4.132 8 C 0.124 3.876 9 H 0.108 0.892 10 N -1.086 6.086 11 S 2.719 3.281 12 O -0.960 6.960 13 O -0.945 6.945 14 C -0.667 4.667 15 C -0.097 4.097 16 C -0.067 4.067 17 O -0.519 6.519 18 Si 0.672 3.328 19 S 0.155 5.845 20 C -0.211 4.211 21 C -0.076 4.076 22 C -0.149 4.149 23 C -0.081 4.081 24 C -0.154 4.154 25 C -0.083 4.083 26 C -0.207 4.207 27 H 0.101 0.899 28 H 0.055 0.945 29 H 0.056 0.944 30 H 0.096 0.904 31 H 0.081 0.919 32 H 0.425 0.575 33 H 0.152 0.848 34 H 0.376 0.624 35 H -0.240 1.240 36 H -0.228 1.228 37 H 0.175 0.825 38 H 0.158 0.842 39 H 0.066 0.934 40 H 0.099 0.901 41 H 0.130 0.870 42 H 0.124 0.876 43 H 0.124 0.876 44 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.660 4.072 4.407 6.226 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.228 6.228 3 C 0.085 3.915 4 C -0.104 4.104 5 C -0.082 4.082 6 H 0.124 0.876 7 C -0.171 4.171 8 C 0.015 3.985 9 H 0.126 0.874 10 N -0.848 5.848 11 S 2.805 3.195 12 O -0.950 6.950 13 O -0.935 6.935 14 C -0.766 4.766 15 C -0.218 4.218 16 C -0.179 4.179 17 O -0.329 6.329 18 Si 0.568 3.432 19 S 0.419 5.581 20 C -0.346 4.346 21 C -0.104 4.104 22 C -0.188 4.188 23 C -0.099 4.099 24 C -0.172 4.172 25 C -0.101 4.101 26 C -0.226 4.226 27 H 0.119 0.881 28 H 0.073 0.927 29 H 0.075 0.925 30 H 0.115 0.885 31 H 0.100 0.900 32 H 0.263 0.737 33 H 0.169 0.831 34 H 0.228 0.772 35 H -0.163 1.163 36 H -0.151 1.151 37 H 0.193 0.807 38 H 0.175 0.825 39 H 0.085 0.915 40 H 0.117 0.883 41 H 0.148 0.852 42 H 0.142 0.858 43 H 0.142 0.858 44 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.730 3.098 5.704 6.717 hybrid contribution -0.816 1.241 -1.544 2.143 sum -2.545 4.340 4.159 6.528 Atomic orbital electron populations 1.23084 0.78182 1.04183 1.01397 1.86058 1.21438 1.26738 1.88571 1.18875 0.91841 0.84292 0.96508 1.19037 0.90116 0.95347 1.05930 1.21440 0.93778 0.95953 0.97041 0.87625 1.23395 0.95048 1.02202 0.96487 1.21667 1.00514 0.79413 0.96899 0.87391 1.55492 1.24857 1.15716 1.88728 1.01340 0.72340 0.72952 0.72910 1.93588 1.64834 1.82557 1.54034 1.93598 1.81812 1.31569 1.86524 1.29955 1.08687 1.17421 1.20544 1.25008 1.00661 1.00006 0.96150 1.24932 0.85316 1.02897 1.04713 1.86703 1.61250 1.33601 1.51331 0.94966 0.87718 0.83182 0.77315 1.84217 1.14373 1.50361 1.09178 1.25904 1.04915 1.08236 0.95593 1.19761 0.94140 0.97646 0.98843 1.23750 0.96296 1.01491 0.97304 1.20870 1.00003 0.91008 0.97973 1.21079 0.93930 0.98514 1.03722 1.20978 0.94804 0.97042 0.97317 1.21269 1.00142 0.92442 1.08716 0.88055 0.92654 0.92544 0.88515 0.90047 0.73705 0.83065 0.77196 1.16338 1.15104 0.80749 0.82457 0.91539 0.88276 0.85225 0.85783 0.85784 0.85489 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.41 9.43 -19.42 -0.18 -0.60 16 3 C 0.13 0.19 6.66 -39.21 -0.26 -0.07 16 4 C -0.10 -0.06 5.30 -104.47 -0.55 -0.61 16 5 C -0.06 0.06 3.69 -90.81 -0.34 -0.28 16 6 H 0.11 -0.05 7.27 -51.93 -0.38 -0.43 16 7 C -0.13 0.16 7.34 -25.92 -0.19 -0.03 16 8 C 0.12 -0.17 4.51 -67.12 -0.30 -0.48 16 9 H 0.11 -0.18 7.74 -51.93 -0.40 -0.58 16 10 N -1.09 0.34 3.70 -4.20 -0.02 0.33 16 11 S 2.72 7.25 4.89 -107.50 -0.53 6.72 16 12 O -0.96 -5.08 16.82 -57.17 -0.96 -6.04 16 13 O -0.94 -5.25 16.57 -63.90 -1.06 -6.31 16 14 C -0.67 -0.82 5.79 -41.21 -0.24 -1.06 16 15 C -0.10 -0.01 5.77 -36.01 -0.21 -0.22 16 16 C -0.07 0.03 2.19 36.00 0.08 0.11 16 17 O -0.52 0.19 8.08 -49.93 -0.40 -0.21 16 18 Si 0.67 -1.19 31.06 -169.99 -5.28 -6.47 16 19 S 0.15 -0.20 20.83 -107.50 -2.24 -2.44 16 20 C -0.21 0.18 11.23 29.04 0.33 0.50 16 21 C -0.08 -0.04 9.70 -41.21 -0.40 -0.44 16 22 C -0.15 0.33 7.11 -25.78 -0.18 0.15 16 23 C -0.08 0.02 8.62 -39.61 -0.34 -0.32 16 24 C -0.15 0.01 10.04 -39.56 -0.40 -0.38 16 25 C -0.08 -0.02 10.04 -39.61 -0.40 -0.42 16 26 C -0.21 -0.15 9.04 -39.43 -0.36 -0.51 16 27 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 28 H 0.05 -0.12 7.66 -51.93 -0.40 -0.52 16 29 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 30 H 0.10 -0.17 7.73 -51.93 -0.40 -0.58 16 31 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.42 -0.49 7.43 -34.47 -0.26 -0.74 16 33 H 0.15 -0.09 7.96 -51.93 -0.41 -0.51 16 34 H 0.38 -0.96 5.63 45.56 0.26 -0.70 16 35 H -0.24 0.09 7.11 56.52 0.40 0.49 16 36 H -0.23 -0.14 7.11 56.52 0.40 0.26 16 37 H 0.18 -0.54 8.06 -52.48 -0.42 -0.96 16 38 H 0.16 -0.01 7.74 -52.49 -0.41 -0.41 16 39 H 0.07 -0.18 5.95 -51.93 -0.31 -0.49 16 40 H 0.10 -0.30 6.30 -51.93 -0.33 -0.63 16 41 H 0.13 -0.30 6.64 -52.49 -0.35 -0.65 16 42 H 0.12 -0.21 8.06 -52.48 -0.42 -0.64 16 43 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 44 H 0.13 -0.11 6.30 -52.49 -0.33 -0.44 16 LS Contribution 374.93 15.07 5.65 5.65 Total: 0.00 -9.08 374.93 -13.21 -22.29 By element: Atomic # 1 Polarization: -4.43 SS G_CDS: -5.42 Total: -9.85 kcal Atomic # 6 Polarization: -0.32 SS G_CDS: -2.77 Total: -3.08 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.02 Total: 0.33 kcal Atomic # 8 Polarization: -10.54 SS G_CDS: -2.61 Total: -13.15 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.28 Total: -6.47 kcal Atomic # 16 Polarization: 7.05 SS G_CDS: -2.77 Total: 4.29 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -9.08 -13.21 -22.29 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15784318_14772022.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.415 kcal (2) G-P(sol) polarization free energy of solvation -9.082 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.496 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.292 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.706 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.08 seconds