Wall clock time and date at job start Mon Mar 8 2021 10:50:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45207 * 109.47031 * 2 1 4 4 C 1.34225 * 116.99969 * 180.02562 * 3 2 1 5 5 O 1.20831 * 119.99891 * 0.02562 * 4 3 2 6 6 C 1.50699 * 120.00151 * 179.97438 * 4 3 2 7 7 H 1.08998 * 109.46874 * 59.99917 * 6 4 3 8 8 C 1.52998 * 109.47065 * 179.97438 * 6 4 3 9 9 C 1.53009 * 109.47075 * 180.02562 * 8 6 4 10 10 C 1.53002 * 109.46799 * 299.99971 * 9 8 6 11 11 F 1.39893 * 109.47467 * 299.99934 * 10 9 8 12 12 C 1.53003 * 109.46756 * 179.97438 * 10 9 8 13 13 S 1.81396 * 109.47001 * 184.99911 * 12 10 9 14 14 O 1.42107 * 110.54192 * 68.38291 * 13 12 10 15 15 O 1.42101 * 110.54699 * 291.62942 * 13 12 10 16 16 O 1.52201 * 104.45072 * 180.02562 * 13 12 10 17 17 C 1.35910 * 114.00217 * 75.00173 * 16 13 12 18 18 C 1.38715 * 120.04367 * 89.99882 * 17 16 13 19 19 C 1.50698 * 120.01488 * 359.75190 * 18 17 16 20 20 O 1.42900 * 109.47144 * 74.99693 * 19 18 17 21 21 Si 1.86296 * 109.47089 * 194.99998 * 19 18 17 22 22 C 1.38163 * 119.96841 * 179.72952 * 18 17 16 23 23 C 1.38282 * 120.06199 * 359.97438 * 22 18 17 24 24 I 2.09498 * 119.95493 * 180.02562 * 23 22 18 25 25 C 1.38431 * 120.08390 * 0.02562 * 23 22 18 26 26 Br 1.89104 * 119.98032 * 180.02562 * 25 23 22 27 27 C 1.38197 * 120.03166 * 359.97438 * 25 23 22 28 28 C 1.53000 * 109.46936 * 60.00279 * 10 9 8 29 29 C 1.52997 * 109.47236 * 300.00214 * 6 4 3 30 30 H 1.08999 * 109.47373 * 180.02562 * 1 2 3 31 31 H 1.09006 * 109.47135 * 300.00290 * 1 2 3 32 32 H 1.09004 * 109.47614 * 59.99461 * 1 2 3 33 33 H 1.08997 * 109.46768 * 240.00228 * 2 1 3 34 34 H 1.08996 * 109.47249 * 120.00026 * 2 1 3 35 35 H 1.08998 * 109.47174 * 60.00307 * 8 6 4 36 36 H 1.08998 * 109.47317 * 300.00102 * 8 6 4 37 37 H 1.08993 * 109.47262 * 180.02562 * 9 8 6 38 38 H 1.08998 * 109.46970 * 60.00058 * 9 8 6 39 39 H 1.09001 * 109.46753 * 65.00393 * 12 10 9 40 40 H 1.08999 * 109.47399 * 305.00165 * 12 10 9 41 41 H 1.09009 * 109.47277 * 314.99815 * 19 18 17 42 42 H 0.96695 * 114.00240 * 299.99921 * 20 19 18 43 43 H 1.48503 * 110.00199 * 59.99825 * 21 19 18 44 44 H 1.48498 * 110.00060 * 181.31663 * 21 19 18 45 45 H 1.08001 * 119.97157 * 179.97438 * 22 18 17 46 46 H 1.08009 * 120.03231 * 180.02562 * 27 25 23 47 47 H 1.08998 * 109.47448 * 59.99536 * 28 10 9 48 48 H 1.08998 * 109.46970 * 179.97438 * 28 10 9 49 49 H 1.09005 * 109.46663 * 299.99971 * 29 6 4 50 50 H 1.09002 * 109.47319 * 59.99675 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9207 2.9375 -0.0012 7 1 3.5850 3.4698 0.8888 8 6 5.4486 2.8574 -0.0010 9 6 6.0334 4.2713 -0.0010 10 6 5.5619 5.0181 -1.2504 11 9 5.9931 4.3352 -2.3926 12 6 6.1462 6.4322 -1.2500 13 16 5.4710 7.3658 -2.6511 14 8 4.0855 7.6180 -2.4608 15 8 5.9588 6.8440 -3.8795 16 8 6.1211 8.7376 -2.5420 17 6 7.4239 8.7643 -2.9279 18 6 7.7514 9.0276 -4.2499 19 6 6.6622 9.2789 -5.2607 20 8 6.1247 10.5886 -5.0661 21 14 7.3677 9.1462 -6.9798 22 6 9.0766 9.0598 -4.6394 23 6 10.0768 8.8304 -3.7125 24 53 12.0852 8.8808 -4.3067 25 6 9.7527 8.5674 -2.3927 26 35 11.1229 8.2547 -1.1274 27 6 8.4284 8.5342 -1.9990 28 6 4.0340 5.0982 -1.2504 29 6 3.4487 3.6841 -1.2504 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 1.8932 -0.5138 -0.8900 34 1 1.8933 -0.5138 0.8899 35 1 5.7845 2.3249 -0.8908 36 1 5.7845 2.3256 0.8892 37 1 7.1218 4.2142 -0.0014 38 1 5.6974 4.8034 0.8889 39 1 7.2312 6.3770 -1.3393 40 1 5.8834 6.9338 -0.3187 41 1 5.8715 8.5392 -5.1343 42 1 5.7394 10.7295 -4.1905 43 1 7.9300 7.7886 -7.1947 44 1 6.3107 9.4232 -7.9853 45 1 9.3316 9.2644 -5.6688 46 1 8.1755 8.3294 -0.9691 47 1 3.6980 5.6304 -0.3604 48 1 3.6981 5.6307 -2.1402 49 1 3.7843 3.1516 -2.1403 50 1 2.3601 3.7411 -1.2500 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). I: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_15786362_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:50:50 Heat of formation + Delta-G solvation = -215.443520 kcal Electronic energy + Delta-G solvation = -43030.785391 eV Core-core repulsion = 37166.211614 eV Total energy + Delta-G solvation = -5864.573777 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 606.939 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -49.14244 -42.93774 -41.81789 -40.05943 -39.17766 -38.68327 -38.08551 -37.72551 -37.56113 -34.37663 -34.22054 -33.42752 -32.65362 -32.13366 -31.46748 -29.26175 -29.17071 -27.05162 -25.29161 -24.70193 -24.22077 -23.55521 -23.48315 -22.05393 -21.65398 -20.91024 -19.88545 -19.36559 -19.11197 -18.82738 -18.48937 -17.97459 -17.75010 -17.56236 -17.29300 -17.08134 -16.75692 -16.65646 -16.32354 -15.81258 -15.75401 -15.53559 -15.34214 -15.14415 -15.04050 -14.82928 -14.80209 -14.58373 -14.32869 -14.26554 -14.01116 -13.80418 -13.75114 -13.61656 -13.56542 -13.37769 -13.29247 -13.23432 -13.20884 -12.95437 -12.94929 -12.67521 -12.53183 -12.37874 -12.24651 -12.14586 -12.06898 -12.01730 -11.79913 -11.71802 -11.64341 -11.59460 -11.45590 -11.40208 -11.17933 -10.74432 -10.43806 -10.15499 -5.12669 -1.57761 -0.75721 -0.58703 -0.42645 0.08032 0.62483 1.03335 1.08707 1.47086 1.56896 1.62131 1.81306 2.10137 2.44686 2.69626 2.96679 3.00822 3.03978 3.14071 3.27481 3.31756 3.45637 3.48945 3.56027 3.61715 3.73819 3.78462 3.89674 3.92643 3.95601 3.96352 4.00199 4.01762 4.10141 4.19956 4.24944 4.25959 4.27731 4.29907 4.48209 4.51004 4.56053 4.73912 4.76605 4.83974 4.85822 4.89382 4.90815 4.96891 5.04536 5.10038 5.21135 5.39760 6.30344 6.59961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.463 3.537 5 O -0.539 6.539 6 C -0.077 4.077 7 H 0.149 0.851 8 C -0.110 4.110 9 C -0.122 4.122 10 C 0.126 3.874 11 F -0.211 7.211 12 C -0.668 4.668 13 S 2.572 3.428 14 O -0.936 6.936 15 O -0.965 6.965 16 O -0.655 6.655 17 C 0.084 3.916 18 C -0.076 4.076 19 C -0.116 4.116 20 O -0.532 6.532 21 Si 0.803 3.197 22 C -0.058 4.058 23 C -0.071 4.071 24 I 0.022 6.978 25 C -0.056 4.056 26 Br 0.012 6.988 27 C -0.089 4.089 28 C -0.178 4.178 29 C -0.110 4.110 30 H 0.095 0.905 31 H 0.071 0.929 32 H 0.067 0.933 33 H 0.063 0.937 34 H 0.070 0.930 35 H 0.056 0.944 36 H 0.089 0.911 37 H 0.102 0.898 38 H 0.130 0.870 39 H 0.173 0.827 40 H 0.212 0.788 41 H 0.078 0.922 42 H 0.378 0.622 43 H -0.251 1.251 44 H -0.279 1.279 45 H 0.173 0.827 46 H 0.198 0.802 47 H 0.138 0.862 48 H 0.074 0.926 49 H 0.058 0.942 50 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.969 2.609 6.519 7.292 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.276 6.276 4 C 0.308 3.692 5 O -0.429 6.429 6 C -0.096 4.096 7 H 0.167 0.833 8 C -0.148 4.148 9 C -0.160 4.160 10 C 0.106 3.894 11 F -0.192 7.192 12 C -0.797 4.797 13 S 2.671 3.329 14 O -0.935 6.935 15 O -0.964 6.964 16 O -0.613 6.613 17 C 0.041 3.959 18 C -0.081 4.081 19 C -0.223 4.223 20 O -0.338 6.338 21 Si 0.702 3.298 22 C -0.079 4.079 23 C -0.214 4.214 24 I 0.171 6.829 25 C -0.139 4.139 26 Br 0.098 6.902 27 C -0.112 4.112 28 C -0.215 4.215 29 C -0.148 4.148 30 H 0.114 0.886 31 H 0.090 0.910 32 H 0.086 0.914 33 H 0.082 0.918 34 H 0.088 0.912 35 H 0.075 0.925 36 H 0.107 0.893 37 H 0.120 0.880 38 H 0.148 0.852 39 H 0.191 0.809 40 H 0.229 0.771 41 H 0.095 0.905 42 H 0.227 0.773 43 H -0.176 1.176 44 H -0.205 1.205 45 H 0.190 0.810 46 H 0.215 0.785 47 H 0.156 0.844 48 H 0.092 0.908 49 H 0.077 0.923 50 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 3.712 2.213 4.679 6.369 hybrid contribution -2.626 -1.289 1.390 3.238 sum 1.086 0.924 6.069 6.234 Atomic orbital electron populations 1.21826 0.90628 1.04265 1.03794 1.23247 0.96963 0.79392 1.02398 1.86512 1.24219 1.33414 1.83444 1.24261 0.80605 0.93269 0.71090 1.90677 1.61143 1.44443 1.46650 1.21295 0.96599 0.88572 1.03135 0.83345 1.21474 0.91667 0.97652 1.04023 1.22179 1.03299 0.94469 0.96097 1.20821 0.94868 0.88024 0.85678 1.92950 1.91314 1.81682 1.53207 1.31487 1.16023 1.08620 1.23573 1.06102 0.75279 0.73949 0.77530 1.93667 1.30148 1.82384 1.87253 1.93652 1.80759 1.79306 1.42670 1.85731 1.30904 1.57982 1.86695 1.17925 0.78353 1.06626 0.92967 1.20689 0.96418 0.97135 0.93823 1.26029 0.96513 0.88065 1.11643 1.86751 1.79211 1.28500 1.39388 0.92955 0.84808 0.82547 0.69515 1.21055 0.89427 0.96755 1.00644 1.24975 0.99497 1.02569 0.94310 1.97121 0.97383 1.98206 1.90202 1.21766 0.94368 1.04259 0.93498 1.96951 1.45697 1.94372 1.53188 1.21611 0.89200 0.98642 1.01706 1.22821 0.92190 0.99242 1.07252 1.21467 1.02856 0.94140 0.96319 0.88613 0.90978 0.91392 0.91813 0.91190 0.92537 0.89276 0.87999 0.85202 0.80927 0.77102 0.90502 0.77325 1.17603 1.20527 0.81006 0.78478 0.84409 0.90795 0.92271 0.88195 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.48 10.29 71.98 0.74 1.22 16 2 C 0.05 0.08 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.23 10.12 -51.37 -0.52 -1.75 16 4 C 0.46 2.03 7.26 71.24 0.52 2.54 16 5 O -0.54 -5.97 15.73 21.95 0.35 -5.63 16 6 C -0.08 0.22 2.63 -11.54 -0.03 0.19 16 7 H 0.15 -1.42 8.14 -2.39 -0.02 -1.44 16 8 C -0.11 0.31 4.37 30.60 0.13 0.44 16 9 C -0.12 1.07 5.00 30.60 0.15 1.23 16 10 C 0.13 -0.50 0.89 -10.79 -0.01 -0.51 16 11 F -0.21 -0.87 15.33 44.97 0.69 -0.18 16 12 C -0.67 5.72 4.79 71.98 0.34 6.06 16 13 S 2.57 3.92 4.17 -56.49 -0.24 3.68 16 14 O -0.94 -5.84 15.64 -118.57 -1.85 -7.70 16 15 O -0.97 -7.83 13.92 -118.57 -1.65 -9.48 16 16 O -0.65 0.49 9.04 -61.63 -0.56 -0.06 16 17 C 0.08 -0.05 4.74 22.50 0.11 0.05 16 18 C -0.08 -0.15 4.68 -19.77 -0.09 -0.25 16 19 C -0.12 -0.57 2.19 71.24 0.16 -0.41 16 20 O -0.53 -2.22 12.65 -148.98 -1.89 -4.10 16 21 Si 0.80 2.12 30.17 68.60 2.07 4.19 16 22 C -0.06 0.04 8.36 22.26 0.19 0.22 16 23 C -0.07 0.10 6.20 22.33 0.14 0.23 16 24 I 0.02 -0.04 38.57 -18.82 -0.73 -0.77 16 25 C -0.06 0.17 6.22 22.31 0.14 0.31 16 26 Br 0.01 -0.05 31.96 -20.37 -0.65 -0.70 16 27 C -0.09 0.48 8.21 22.38 0.18 0.66 16 28 C -0.18 0.60 4.32 30.61 0.13 0.73 16 29 C -0.11 0.18 5.02 30.61 0.15 0.33 16 30 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 31 H 0.07 -0.27 8.14 -2.38 -0.02 -0.29 16 32 H 0.07 -0.20 8.14 -2.38 -0.02 -0.21 16 33 H 0.06 0.17 8.13 -2.39 -0.02 0.15 16 34 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 35 H 0.06 0.17 7.76 -2.39 -0.02 0.15 16 36 H 0.09 -0.29 8.10 -2.39 -0.02 -0.30 16 37 H 0.10 -1.06 8.14 -2.39 -0.02 -1.08 16 38 H 0.13 -2.06 8.14 -2.39 -0.02 -2.08 16 39 H 0.17 -2.18 6.62 -2.39 -0.02 -2.20 16 40 H 0.21 -3.90 8.14 -2.39 -0.02 -3.92 16 41 H 0.08 0.60 5.41 -2.38 -0.01 0.59 16 42 H 0.38 -0.10 8.59 -74.06 -0.64 -0.74 16 43 H -0.25 -1.21 7.11 99.48 0.71 -0.51 16 44 H -0.28 -2.32 7.11 99.48 0.71 -1.62 16 45 H 0.17 -0.75 5.13 -2.91 -0.01 -0.76 16 46 H 0.20 -2.71 7.51 -2.91 -0.02 -2.73 16 47 H 0.14 -1.42 8.14 -2.39 -0.02 -1.44 16 48 H 0.07 0.07 5.40 -2.39 -0.01 0.05 16 49 H 0.06 0.15 7.81 -2.38 -0.02 0.13 16 50 H 0.10 -0.31 8.11 -2.39 -0.02 -0.33 16 Total: 0.00 -26.83 454.71 -1.15 -27.98 By element: Atomic # 1 Polarization: -19.51 SS G_CDS: 0.43 Total: -19.08 kcal Atomic # 6 Polarization: 10.20 SS G_CDS: 3.40 Total: 13.59 kcal Atomic # 8 Polarization: -22.60 SS G_CDS: -6.12 Total: -28.72 kcal Atomic # 9 Polarization: -0.87 SS G_CDS: 0.69 Total: -0.18 kcal Atomic # 14 Polarization: 2.12 SS G_CDS: 2.07 Total: 4.19 kcal Atomic # 16 Polarization: 3.92 SS G_CDS: -0.24 Total: 3.68 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -0.65 Total: -0.70 kcal Atomic # 53 Polarization: -0.04 SS G_CDS: -0.73 Total: -0.77 kcal Total: -26.83 -1.15 -27.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_15786362_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -187.463 kcal (2) G-P(sol) polarization free energy of solvation -26.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -214.295 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.148 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.980 kcal (6) G-S(sol) free energy of system = (1) + (5) -215.444 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.74 seconds